BLASTX nr result

ID: Panax21_contig00018166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018166
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycope...   212   4e-53
ref|XP_002524506.1| grr1, plant, putative [Ricinus communis] gi|...   196   2e-48
ref|XP_002308982.1| ein3-binding f-box protein 4 [Populus tricho...   189   5e-46
ref|XP_002285249.1| PREDICTED: EIN3-binding F-box protein 1-like...   184   1e-44
emb|CAN83761.1| hypothetical protein VITISV_043743 [Vitis vinifera]   177   2e-42

>ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|82734614|gb|ABB89717.1| EIN3-binding F-box protein 1
           [Solanum lycopersicum] gi|83584402|gb|ABC24971.1|
           EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|240017777|gb|ACS44350.1| EIN3-binding F-box protein 2
           [Solanum lycopersicum]
          Length = 637

 Score =  212 bits (540), Expect = 4e-53
 Identities = 112/169 (66%), Positives = 132/169 (78%)
 Frame = -1

Query: 507 EDEFYSGGSACSANSGLLFLIGSNADVYSPPCKRSCISGSFAFEEHMVEEKEPSIEVLPD 328
           +DEFYSGGS CSA+ GL+  +G +ADVY PP KR+ ISG F  E+     K+PS+EVLPD
Sbjct: 10  DDEFYSGGSFCSADLGLMLSLG-HADVYCPPRKRARISGPFVVEDR---SKDPSLEVLPD 65

Query: 327 ECLFEIFRRLPGGQERSASACLSKHWLMLLSSVRNSEIFRSKSTQAGPEVNESTNDIEMI 148
           ECLFEI RRLPGG+ER A+AC+SK WL +LSSV+NSEI RSKS         + ND  MI
Sbjct: 66  ECLFEILRRLPGGRERGAAACVSKRWLTVLSSVKNSEICRSKSYN-------NLNDAIMI 118

Query: 147 SADKNWEVECDGYLTRCLEGKKATDLRLAAIAVGTATHGGLAKLSIRGS 1
           S D++ EVECDGYLTRC+EGKKATD+RLAAIAVGT+T GGL KLSIRGS
Sbjct: 119 SKDEDLEVECDGYLTRCVEGKKATDIRLAAIAVGTSTRGGLGKLSIRGS 167


>ref|XP_002524506.1| grr1, plant, putative [Ricinus communis]
           gi|223536294|gb|EEF37946.1| grr1, plant, putative
           [Ricinus communis]
          Length = 648

 Score =  196 bits (499), Expect = 2e-48
 Identities = 104/173 (60%), Positives = 127/173 (73%), Gaps = 4/173 (2%)
 Frame = -1

Query: 507 EDEFYSGGSACS--ANSGLLFLIGSNADVYSPPCKRSCISGSFAFEEHMVEE-KEPSIEV 337
           +DEFYSGGS C+   + G  + IGS+ D YSPPCKR+ IS  F F     E+ K+PSI+V
Sbjct: 10  DDEFYSGGSLCANPMDLGRYYSIGSHVDAYSPPCKRARISSPFLFGSSEFEQNKQPSIDV 69

Query: 336 LPDECLFEIFRRLPGGQERSASACLSKHWLMLLSSVRNSEIFRSKSTQAGPEVNESTNDI 157
           LPDECLFEIFRR+PGG+ERSA AC+SK WL LLSS+R +E+   +       +    ND+
Sbjct: 70  LPDECLFEIFRRIPGGKERSACACVSKRWLTLLSSIRRAELCNER-------IVPGCNDV 122

Query: 156 EMISA-DKNWEVECDGYLTRCLEGKKATDLRLAAIAVGTATHGGLAKLSIRGS 1
           EM S+ D+N E+E DGYLTR LEGKKATD+RLAAIAVGT+ HGGL KL IRGS
Sbjct: 123 EMASSCDENGEIESDGYLTRSLEGKKATDMRLAAIAVGTSGHGGLGKLLIRGS 175


>ref|XP_002308982.1| ein3-binding f-box protein 4 [Populus trichocarpa]
           gi|222854958|gb|EEE92505.1| ein3-binding f-box protein 4
           [Populus trichocarpa]
          Length = 656

 Score =  189 bits (479), Expect = 5e-46
 Identities = 107/176 (60%), Positives = 124/176 (70%), Gaps = 7/176 (3%)
 Frame = -1

Query: 507 EDEFYSGGSACSANS--GLLFLIGSNADVYSPPCKRSCISGSFAFEEHMVEEK-EPSIEV 337
           +DE YSGGS  +  S  G L+ I SN DVYSP CKR+ IS  F FE    E+   PSIEV
Sbjct: 10  DDEIYSGGSFYTNPSDLGRLYSIVSNVDVYSPACKRARISAPFLFESSGFEQNMRPSIEV 69

Query: 336 LPDECLFEIFRRLPGGQERSASACLSKHWLMLLSSVRNSEIFRSKSTQAGPEVNEST--- 166
           LPDECLFEIFRR+P G+ERS+ A +SK WLMLLSS+R SE     S     E NE+    
Sbjct: 70  LPDECLFEIFRRVPEGKERSSCASVSKKWLMLLSSIRRSEF--CNSNPVAEEENETAAPV 127

Query: 165 -NDIEMISADKNWEVECDGYLTRCLEGKKATDLRLAAIAVGTATHGGLAKLSIRGS 1
            ND+EM+S + N EVE DGYLTR LEGKKATD+RLAAIAVGT++ GGL KL IRGS
Sbjct: 128 CNDVEMVSCEDNGEVESDGYLTRSLEGKKATDMRLAAIAVGTSSRGGLGKLLIRGS 183


>ref|XP_002285249.1| PREDICTED: EIN3-binding F-box protein 1-like [Vitis vinifera]
          Length = 661

 Score =  184 bits (468), Expect = 1e-44
 Identities = 109/183 (59%), Positives = 131/183 (71%), Gaps = 14/183 (7%)
 Frame = -1

Query: 507 EDEFYSGGSAC--SANSGLLFLIGSNADVYSPPCKRSCISGSFAFEEHMVE-EKEPSIEV 337
           +D+FY GGS      +SGLL  IGS  DVY PP KRS I+  + F E+ +E EK PSI+V
Sbjct: 10  DDDFYPGGSFYINPMDSGLLVSIGSCMDVYCPPRKRSRITAPYIFRENNLELEKRPSIDV 69

Query: 336 LPDECLFEIFRRLPGGQERSASACLSKHWLMLLSSVRNSEIFRSKSTQAGPEVNEST--- 166
           LPDECLFEI RRLPGGQERS+ A +SK WLMLLSS+R +EI   KS+Q+   +NES+   
Sbjct: 70  LPDECLFEILRRLPGGQERSSCARVSKRWLMLLSSIRRTEICPRKSSQS---LNESSKLD 126

Query: 165 --------NDIEMISADKNWEVECDGYLTRCLEGKKATDLRLAAIAVGTATHGGLAKLSI 10
                   +DIEMISA+   E+  DGYLTRCLEGKKATD+ LAAIAVGT++ GGL KLSI
Sbjct: 127 KELTIPVPDDIEMISAEDR-ELGSDGYLTRCLEGKKATDISLAAIAVGTSSRGGLGKLSI 185

Query: 9   RGS 1
           R S
Sbjct: 186 RES 188


>emb|CAN83761.1| hypothetical protein VITISV_043743 [Vitis vinifera]
          Length = 669

 Score =  177 bits (449), Expect = 2e-42
 Identities = 103/168 (61%), Positives = 123/168 (73%), Gaps = 12/168 (7%)
 Frame = -1

Query: 468 NSGLLFLIGSNADVYSPPCKRSCISGSFAFEEHMVE-EKEPSIEVLPDECLFEIFRRLPG 292
           +SGLL  IGS  DVY PP KRS I+  + F E+ +E EK PSI+VLPDECLFEI RRLPG
Sbjct: 2   DSGLLVSIGSCMDVYCPPRKRSRITAPYIFRENNLELEKRPSIDVLPDECLFEILRRLPG 61

Query: 291 GQERSASACLSKHWLMLLSSVRNSEIFRSKSTQAGPEVNEST-----------NDIEMIS 145
           GQERS+ A +SK WLMLLSS+R +EI   KS+Q+   +NES+           +DIEMIS
Sbjct: 62  GQERSSCARVSKRWLMLLSSIRRTEICPRKSSQS---LNESSKLDKELTIPVPDDIEMIS 118

Query: 144 ADKNWEVECDGYLTRCLEGKKATDLRLAAIAVGTATHGGLAKLSIRGS 1
           A+   E+  DGYLTRCLEGKKATD+ LAAIAVGT++ GGL KLSIR S
Sbjct: 119 AEDR-ELGSDGYLTRCLEGKKATDISLAAIAVGTSSRGGLGKLSIRES 165


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