BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018159
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   226   2e-57
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              226   2e-57
ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis ...   213   1e-53
dbj|BAJ34201.1| unnamed protein product [Thellungiella halophila]     213   1e-53
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   213   1e-53

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  226 bits (575), Expect = 2e-57
 Identities = 109/139 (78%), Positives = 122/139 (87%)
 Frame = -3

Query: 417 LIYANFRLVVHIAKQYLGRGLNLQDLLQEGSMGLMWSVQKFKPQAGCRFATYAFWWIRQA 238
           LIYAN R+VVHIAKQY GRGLNLQDLLQEGSMGLM SV+KFKP AGCRFA+YA+WWIRQA
Sbjct: 336 LIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQA 395

Query: 237 VRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCIQEGHHCPTKEQIAARAGITVDKLERLM 58
           VRKAIFQHSRTIRLP+++Y LL KV EAKR  IQEGHH PTKE+IA R GIT++KL+RL+
Sbjct: 396 VRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLL 455

Query: 57  YSARTPLSMQQPVWTDQNT 1
              R PLSMQQPVW DQ+T
Sbjct: 456 LHTRMPLSMQQPVWADQDT 474


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  226 bits (575), Expect = 2e-57
 Identities = 109/139 (78%), Positives = 122/139 (87%)
 Frame = -3

Query: 417 LIYANFRLVVHIAKQYLGRGLNLQDLLQEGSMGLMWSVQKFKPQAGCRFATYAFWWIRQA 238
           LIYAN R+VVHIAKQY GRGLNLQDLLQEGSMGLM SV+KFKP AGCRFA+YA+WWIRQA
Sbjct: 325 LIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQA 384

Query: 237 VRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCIQEGHHCPTKEQIAARAGITVDKLERLM 58
           VRKAIFQHSRTIRLP+++Y LL KV EAKR  IQEGHH PTKE+IA R GIT++KL+RL+
Sbjct: 385 VRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLL 444

Query: 57  YSARTPLSMQQPVWTDQNT 1
              R PLSMQQPVW DQ+T
Sbjct: 445 LHTRMPLSMQQPVWADQDT 463


>ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis lyrata subsp. lyrata]
           gi|297327323|gb|EFH57743.1| RNA polymerase sigma-70
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score =  213 bits (543), Expect = 1e-53
 Identities = 97/139 (69%), Positives = 124/139 (89%)
 Frame = -3

Query: 417 LIYANFRLVVHIAKQYLGRGLNLQDLLQEGSMGLMWSVQKFKPQAGCRFATYAFWWIRQA 238
           LI AN RLVVHIAKQY  RGLN QDLLQEGSMGLM SV+KFKPQ+GCRFATYA+WWIRQ+
Sbjct: 310 LITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQS 369

Query: 237 VRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCIQEGHHCPTKEQIAARAGITVDKLERLM 58
           +RK+IFQ+SRTIRLP++VY LL KV+EA++ C+QEG++ P+KEQ+A   G++ +KL++L+
Sbjct: 370 IRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEQLAGHVGVSTEKLDKLL 429

Query: 57  YSARTPLSMQQPVWTDQNT 1
           Y+ RTPLSMQQP+W+DQ+T
Sbjct: 430 YNTRTPLSMQQPIWSDQDT 448


>dbj|BAJ34201.1| unnamed protein product [Thellungiella halophila]
          Length = 547

 Score =  213 bits (542), Expect = 1e-53
 Identities = 97/139 (69%), Positives = 125/139 (89%)
 Frame = -3

Query: 417 LIYANFRLVVHIAKQYLGRGLNLQDLLQEGSMGLMWSVQKFKPQAGCRFATYAFWWIRQA 238
           LI AN RLVVHIAKQY  RGLN QDLLQEGSMGLM SV+KFKPQ+GCRFATYA+WWIRQ+
Sbjct: 311 LITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQS 370

Query: 237 VRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCIQEGHHCPTKEQIAARAGITVDKLERLM 58
           +RK+IFQ+SRTIRLP++VY LL KV+EA++ CIQ+G++ P+KEQ+A+  G++ +KL++L+
Sbjct: 371 IRKSIFQNSRTIRLPENVYMLLGKVSEARKTCIQDGNYRPSKEQLASHVGVSTEKLDKLL 430

Query: 57  YSARTPLSMQQPVWTDQNT 1
           Y+ RTPLSMQQP+W+DQ+T
Sbjct: 431 YNTRTPLSMQQPIWSDQDT 449


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 548

 Score =  213 bits (542), Expect = 1e-53
 Identities = 104/139 (74%), Positives = 117/139 (84%)
 Frame = -3

Query: 417 LIYANFRLVVHIAKQYLGRGLNLQDLLQEGSMGLMWSVQKFKPQAGCRFATYAFWWIRQA 238
           LI AN R+VVHIAKQY GRGL+LQDLLQEGSMGLM S++KFKPQ GCRFATYA+WWIRQ 
Sbjct: 312 LINANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFATYAYWWIRQT 371

Query: 237 VRKAIFQHSRTIRLPDSVYGLLYKVTEAKRQCIQEGHHCPTKEQIAARAGITVDKLERLM 58
           VRKAIFQHSRTIRLP++VY  L KV+EAKR  I EG+H PTKE++A R GIT  +LERL+
Sbjct: 372 VRKAIFQHSRTIRLPENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGITTVRLERLL 431

Query: 57  YSARTPLSMQQPVWTDQNT 1
           Y AR PLSMQQ VW DQ T
Sbjct: 432 YMARMPLSMQQTVWADQET 450