BLASTX nr result

ID: Panax21_contig00018144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018144
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044614.1| Os01g0815700 [Oryza sativa Japonica Group] g...    67   5e-13
gb|EEC71698.1| hypothetical protein OsI_04199 [Oryza sativa Indi...    66   2e-12
ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chlorop...    67   1e-10
emb|CBI31208.3| unnamed protein product [Vitis vinifera]               67   1e-10
dbj|BAJ91601.1| predicted protein [Hordeum vulgare subsp. vulgare]     68   8e-10

>ref|NP_001044614.1| Os01g0815700 [Oryza sativa Japonica Group]
           gi|56785062|dbj|BAD82701.1| putative ZnF_RBZ domain
           protein [Oryza sativa Japonica Group]
           gi|113534145|dbj|BAF06528.1| Os01g0815700 [Oryza sativa
           Japonica Group]
          Length = 950

 Score = 67.0 bits (162), Expect(3) = 5e-13
 Identities = 32/37 (86%), Positives = 32/37 (86%)
 Frame = +2

Query: 326 GRTGKSLEGSAVKDPDPLDMSEEAKAERWFRHNANAK 436
           G TGKSLEGSAVKDPDPLDMSEEAKAERWFR  A  K
Sbjct: 854 GYTGKSLEGSAVKDPDPLDMSEEAKAERWFRRAAQIK 890



 Score = 31.2 bits (69), Expect(3) = 5e-13
 Identities = 22/99 (22%), Positives = 44/99 (44%)
 Frame = +1

Query: 10   SGNQTRNSPGSHAINNDNWSNSYPGKDNIAQTGPSSIGSPSKTTFSSQISGNESWRSRKS 189
            +G ++ N+P     N+  WS++    +N A +  SS  S S  + +S  + N +W    +
Sbjct: 760  NGGRSDNNP---YYNSSTWSSNSTYSNNAAWSSNSSYNSNSAWSSNSSYNSNSAW---SN 813

Query: 190  GKENAFQTSTPSIGNSTQYSFSAQPTSNLIGTTIGSPEN 306
               N++  S    G +   S +++P      ++ G   N
Sbjct: 814  NSNNSWSGSYSDNGGTGSGSSASRPNQTAGYSSYGESAN 852



 Score = 20.8 bits (42), Expect(3) = 5e-13
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 417 DIMPMRKGI 443
           +IMPMRKG+
Sbjct: 905 EIMPMRKGV 913


>gb|EEC71698.1| hypothetical protein OsI_04199 [Oryza sativa Indica Group]
          Length = 1058

 Score = 65.9 bits (159), Expect(3) = 2e-12
 Identities = 31/37 (83%), Positives = 32/37 (86%)
 Frame = +2

Query: 326 GRTGKSLEGSAVKDPDPLDMSEEAKAERWFRHNANAK 436
           G TGKSLEGSAVKDPDPLDMSEEAKAERWF+  A  K
Sbjct: 755 GYTGKSLEGSAVKDPDPLDMSEEAKAERWFKRAAQIK 791



 Score = 30.0 bits (66), Expect(3) = 2e-12
 Identities = 21/99 (21%), Positives = 43/99 (43%)
 Frame = +1

Query: 10  SGNQTRNSPGSHAINNDNWSNSYPGKDNIAQTGPSSIGSPSKTTFSSQISGNESWRSRKS 189
           +G ++ N+P     N+  WS++    +N A +  SS  S    + +S  + N +W    +
Sbjct: 661 NGGRSDNNP---YYNSSTWSSNSTYSNNAAWSSNSSYNSNGAQSSNSSYNSNSAW---SN 714

Query: 190 GKENAFQTSTPSIGNSTQYSFSAQPTSNLIGTTIGSPEN 306
              N++  S    G +   S +++P      ++ G   N
Sbjct: 715 NSNNSWSGSYSDNGGTGSGSSASRPNQTAGYSSYGESAN 753



 Score = 20.8 bits (42), Expect(3) = 2e-12
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 417 DIMPMRKGI 443
           +IMPMRKG+
Sbjct: 806 EIMPMRKGV 814


>ref|XP_002268494.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
           vinifera]
          Length = 879

 Score = 66.6 bits (161), Expect(2) = 1e-10
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +2

Query: 317 VKTGRTGKSLEGSAVKDPDPLDMSEEAKAERWFRHNANAK 436
           V+ G TGKSLEGSAVK+PDPLDMSEEAKAERWFR  A  K
Sbjct: 777 VRQGWTGKSLEGSAVKEPDPLDMSEEAKAERWFRRVAQIK 816



 Score = 25.0 bits (53), Expect(2) = 1e-10
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 20/47 (42%)
 Frame = +3

Query: 420 IMPMRKGI--------------------FFQLLCLVSSDSVKKENDS 500
           IMPMRKG+                    + + L +VSS+ VKKEN+S
Sbjct: 832 IMPMRKGVNRFVVSKRKTPLERRLTSPQYRRNLPVVSSEPVKKENES 878


>emb|CBI31208.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 66.6 bits (161), Expect(2) = 1e-10
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = +2

Query: 317 VKTGRTGKSLEGSAVKDPDPLDMSEEAKAERWFRHNANAK 436
           V+ G TGKSLEGSAVK+PDPLDMSEEAKAERWFR  A  K
Sbjct: 574 VRQGWTGKSLEGSAVKEPDPLDMSEEAKAERWFRRVAQIK 613



 Score = 25.0 bits (53), Expect(2) = 1e-10
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 20/47 (42%)
 Frame = +3

Query: 420 IMPMRKGI--------------------FFQLLCLVSSDSVKKENDS 500
           IMPMRKG+                    + + L +VSS+ VKKEN+S
Sbjct: 629 IMPMRKGVNRFVVSKRKTPLERRLTSPQYRRNLPVVSSEPVKKENES 675


>dbj|BAJ91601.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1051

 Score = 67.8 bits (164), Expect(2) = 8e-10
 Identities = 33/41 (80%), Positives = 33/41 (80%)
 Frame = +2

Query: 314  YVKTGRTGKSLEGSAVKDPDPLDMSEEAKAERWFRHNANAK 436
            Y   G TGKSLEGSAVKDPDPLDMSEEAKAERWFR  A  K
Sbjct: 951  YGSGGYTGKSLEGSAVKDPDPLDMSEEAKAERWFRRAAQIK 991



 Score = 20.8 bits (42), Expect(2) = 8e-10
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 417  DIMPMRKGI 443
            +IMPMRKG+
Sbjct: 1006 EIMPMRKGV 1014


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