BLASTX nr result

ID: Panax21_contig00018143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018143
         (1252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...   111   4e-22
dbj|BAC66625.1| F-box [Prunus mume]                                   100   1e-18
dbj|BAJ52238.1| hypothetical protein [Pyrus pyrifolia]                 94   1e-16
dbj|BAJ11961.1| MdFBX13 [Malus x domestica]                            93   2e-16
dbj|BAJ11957.1| MdFBX9 [Malus x domestica]                             92   2e-16

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
            gi|223533120|gb|EEF34878.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 379

 Score =  111 bits (277), Expect = 4e-22
 Identities = 99/373 (26%), Positives = 157/373 (42%), Gaps = 26/373 (6%)
 Frame = +2

Query: 53   ISDIPAEILSDIFSRLPARSVLSCQCVCKGFDSLIKTPDFIASHVHNXXXXXXXXXXXXX 232
            +  IP E+L  IF RLP + +L C+C+CK + SLI   +FI++H                
Sbjct: 2    LDHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSR-------------- 47

Query: 233  XXFCSIHYRTDDNTTDHILADHTK------------GDNSVFSLKSRNPIVIANG-GMVR 373
                   Y  D N  ++++  H               D+ +FS        + +      
Sbjct: 48   -------YTIDSNNNNYLILRHYSRSNKKERFALHFDDDDMFSEYQELDFPLESSWDYFE 100

Query: 374  LIGSSNGLFC-----AHVCQEEEEGYSILLWNPVTKQNRFLPKPQIDNS-SEVVLAFGFV 535
            ++GS NG+ C     +H+ +       I+LWNP    +  LP  +I    S VVL FGF 
Sbjct: 101  IVGSCNGIICLTDNHSHILKR------IVLWNPSIGLSVTLPLQRISYKVSNVVLGFGFD 154

Query: 536  PETKDYKVVQIASYPLKPPKIQVYKMSTDSWTIIDNTTPTLSGFVPNHVEFKVYSLSCGK 715
              T DYKV++I  Y                      +T   S  VP  VE  ++ LS G 
Sbjct: 155  SRTNDYKVIRIVYY----------------------STNDDSLMVPPEVE--IFELSRGT 190

Query: 716  WTVMETSLNDVYMDVNPISRIHIRGPWYSSPVPLKGAFHFLAVVPLPIYSDYEDQSFIAV 895
            W +  ++    Y DV+           YSS + L+GA H++       Y    + +    
Sbjct: 191  WRINNSASVPAY-DVSK----------YSSQIVLEGAIHWVG------YYSPRELTIAVY 233

Query: 896  VSFDLKDEQLRLIDVLGFDMVPHSLKGITFGLLNESLMLVCTKRH-------TCDIWVMN 1054
            V  D + ++ R+ D +    + H    ++  L  + L ++  K+        +C IWVMN
Sbjct: 234  VVHDEEFKEFRMPDEISGTALQH----LSVMLCCQLLSIIQYKKRGSRLCYESCCIWVMN 289

Query: 1055 EYGIHESWTKQFS 1093
            EYG+H+SWTK F+
Sbjct: 290  EYGVHDSWTKLFN 302


>dbj|BAC66625.1| F-box [Prunus mume]
          Length = 399

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 96/385 (24%), Positives = 168/385 (43%), Gaps = 23/385 (5%)
 Frame = +2

Query: 77   LSDIFSRLPARSVLSCQCVCKGFDSLIKTPDFIASHVHNXXXXXXXXXXXXXXX------ 238
            L  I  RLP++S++  +CV K + ++I  P F+ +H+ N                     
Sbjct: 7    LRHILPRLPSKSLMRFKCVRKSWYTVINNPTFVENHLSNSMHNKLSTCILVSRFVQSDTN 66

Query: 239  -------FCSIHYRTDDNTTDHILADHTKGDNSVFSLKSRNPIVIANGGMVRLIGSSNGL 397
                   F  +H R D +  +H L  +   ++  F L S   I + +     ++G  NG+
Sbjct: 67   SDEKELAFSFLHLRNDYDDAEHNL--NFVVEDIKFPLSSGRFIGLEDVESPSILGHCNGI 124

Query: 398  FCAHVCQEEEEGYSILLWNPVTKQNRFLPKPQIDNSSEVVLAFGFVPETKDYKVVQIASY 577
             C   C +     +++L NP  K+ + LPK  + +     + FG+ P++KDYKV +IASY
Sbjct: 125  VCLSPCSD-----NLVLCNPAIKEIKLLPKSGLPDWWGCAVGFGYDPKSKDYKVSRIASY 179

Query: 578  P------LKPPKIQVYKMSTDSWTIIDNTTPTLSG--FVPNHVEFKVYSLSCGKWTVMET 733
                   + PP++++Y +STDSW  I+N +       F P++  F++Y      W   E 
Sbjct: 180  QAEIDGLIPPPRVEIYTLSTDSWREINNNSLETDSTCFFPDY--FQIYFQGICYWVGYEQ 237

Query: 734  SLNDVYMDVNPISRIHIRGPWYSSPVPLKGAFHFLAVVPLPIYSDYEDQSFIAVVSFDLK 913
                V  +      + I   ++ +   +   FH L + P   Y   E  S+   +S+ L 
Sbjct: 238  PKQSVEYEDEEQKPMVI---FFDTGDEI---FHNL-LFPDSFYMYEEGSSYAYEMSY-LM 289

Query: 914  DEQLRLIDVLGFDMVPHSLKGITFGLLNESLMLVCTKRHTCDIWVMNEY-GIHESWTKQF 1090
               LR+I           L   +  L   +   VC   +   +WV++++ G   SWTK  
Sbjct: 290  YCDLRII-----------LWDGSIALFGFNRFSVCPDSY--GVWVLDDFDGAKGSWTKHL 336

Query: 1091 SFTEFPKFLWPMEYWK-DNILLMAE 1162
            +F         +E+W+ D IL++ E
Sbjct: 337  NFEPLMGIKRVLEFWRSDEILMVTE 361


>dbj|BAJ52238.1| hypothetical protein [Pyrus pyrifolia]
          Length = 390

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 103/395 (26%), Positives = 161/395 (40%), Gaps = 28/395 (7%)
 Frame = +2

Query: 56   SDIPAEILSDIFSRLPARSVLSCQCVCKGFDSLIKTPDFIASHVHNXXXXXXXXXXXXXX 235
            S+ P E + +I S+LPA+++   +C+ K +  LI +P F+A H++N              
Sbjct: 4    SETPGERVVEILSKLPAKTLTRFKCLRKSWCILINSPSFVAKHLNNSVDNRLSSSTCILV 63

Query: 236  XFCSIHYRTDDNTTDHILAD--HTKGDNSVFSL-----KSRNPIVIANGGMVRLIGSSNG 394
                 H   D N    +     +   D+   SL         P  + +   V++ G  NG
Sbjct: 64   NHSQPHIFPDKNWKQEVFWSKINISIDSDEHSLHYDVVDLNIPFPLEDHDFVQIHGYCNG 123

Query: 395  LFCAHVCQEEEEGYSILLWNPVTKQNRFLP-----------KPQIDNSSEVVLAFGFVPE 541
            + C  V      G + LL NP T++   LP           K ++D + E  L FG+  +
Sbjct: 124  IVCVIV------GKNFLLCNPATREFMQLPDSCLLLPPAEGKFELDTTFE-ALGFGYDCK 176

Query: 542  TKDYKVVQIASYPLKPPKIQVYKMSTDSWTIIDNTTPTLSGFVPNHVEFKVYSLSCGKWT 721
             K+YKVVQI         I+  + S D  T    TT      +P+  E  VY+ +   W 
Sbjct: 177  GKEYKVVQI---------IENCEYSDDEQTFNHCTT------LPHTAE--VYTTAANSWK 219

Query: 722  VMETSLNDVYMDVNPISRIHIRGPWYSSPVPLKGAFHFLAVVPLPIYSDYEDQSFIAVVS 901
             ++  ++                  +S  V LKG  ++ A          +D+ +  V+S
Sbjct: 220  EIKIDISSTTYS-------------WSCSVYLKGFCYWYAT---------DDEEY--VLS 255

Query: 902  FDLKDEQLRLIDVLGFDMVPHSLKGITF---GLLNESLMLVCTK------RHTCDIWVMN 1054
            FDL DE    I             G TF    L NESL   C++        +C+IWVM+
Sbjct: 256  FDLCDETFHRI-----QFPSRGESGFTFFYIFLRNESLTSFCSRYDQSGDSQSCEIWVMD 310

Query: 1055 EY-GIHESWTKQFSFTEFPKFLWPMEYWKDNILLM 1156
             Y G+  SWTK  +         P+ +WK + LLM
Sbjct: 311  HYDGVKSSWTKLLTIGPLQGIEKPLTFWKSDELLM 345


>dbj|BAJ11961.1| MdFBX13 [Malus x domestica]
          Length = 390

 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 102/392 (26%), Positives = 159/392 (40%), Gaps = 28/392 (7%)
 Frame = +2

Query: 65   PAEILSDIFSRLPARSVLSCQCVCKGFDSLIKTPDFIASHVHNXXXXXXXXXXXXXXXFC 244
            P + + +I S+LPA+S+   +C+ K + +LI +P F+A H++N                 
Sbjct: 7    PEDRMIEILSKLPAKSLTRFKCIRKSWCTLINSPSFVAKHLNNSADSKLSSSTCILVNHS 66

Query: 245  SIHYRTDDNTTDHILAD--HTKGDNSVFSL-----KSRNPIVIANGGMVRLIGSSNGLFC 403
              H   D N    +     +   D+   SL         P  + +   V++ G  NG+ C
Sbjct: 67   QPHIFPDKNWKQEVFWSMINISIDSDEHSLHYDVVDLNIPFPLEDHDFVQIHGYCNGIVC 126

Query: 404  AHVCQEEEEGYSILLWNPVTKQNRFLP-----------KPQIDNSSEVVLAFGFVPETKD 550
              V      G   LL NP T++   LP           K ++D + E  L FG+  + K+
Sbjct: 127  VIV------GKKFLLCNPATREFMQLPNSCLLLPPAEGKFELDTTFE-ALGFGYDCKGKE 179

Query: 551  YKVVQIASYPLKPPKIQVYKMSTDSWTIIDNTTPTLSGFVPNHVEFKVYSLSCGKWTVME 730
            YKVVQI         I+  + S D  T    TT      +P+  E  VY+     W  ++
Sbjct: 180  YKVVQI---------IENCEYSDDEQTFNHCTT------LPHTAE--VYTTVANSWKEIK 222

Query: 731  TSLNDVYMDVNPISRIHIRGPWYSSPVPLKGAFHFLAVVPLPIYSDYEDQSFIAVVSFDL 910
              ++                  +S  V LKG  ++ A          +D+ +  V+SFDL
Sbjct: 223  IDISSTTYS-------------WSCSVYLKGFCYWYAT---------DDEEY--VLSFDL 258

Query: 911  KDEQLRLIDVLGFDMVPHSLKGITF---GLLNESLMLVCTK------RHTCDIWVMNEY- 1060
             DE    I             G TF    L NESL   C++        +C+IWVM++Y 
Sbjct: 259  CDETFHRI-----QFPSRGESGFTFFYIFLRNESLTSFCSRYDRSGDSQSCEIWVMDDYD 313

Query: 1061 GIHESWTKQFSFTEFPKFLWPMEYWKDNILLM 1156
            G+  SWTK  +         P+ +WK + LLM
Sbjct: 314  GVKSSWTKLLTVGPLQAIEKPLTFWKSDELLM 345


>dbj|BAJ11957.1| MdFBX9 [Malus x domestica]
          Length = 400

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 107/426 (25%), Positives = 175/426 (41%), Gaps = 33/426 (7%)
 Frame = +2

Query: 56   SDIPAEILSDIFSRLPARSVLSCQCVCKGFDSLIKTPDFIASHVHNXXXXXXXXXXXXXX 235
            S+ P + + +  SRLP +S++  +C+CK + +LI +  F+A H++N              
Sbjct: 7    SETPEDRVVETLSRLPPKSLMRFKCICKSWCTLINSLSFVAKHLNNSMDNKLSSSTCILL 66

Query: 236  XFCSIHYRTDDNTTDHI------LADHTKGDNSVFSLKSRN-PIVIANGGMVRLIGSSNG 394
                 H   D++    +      L+  +   N  + ++  N P  +     V++ G  NG
Sbjct: 67   SRSQAHVFPDNSWKPEVFWSMINLSIDSDEHNLHYDVEDLNIPFPLEGHDFVQIEGYCNG 126

Query: 395  LFCAHVCQEEEEGYSILLWNPVTKQNRFLP--------KPQIDNSSEVV---LAFGFVPE 541
            + C  +        ++LL NP T + R LP        +PQ     E +   L FG+  +
Sbjct: 127  IVCV-IAGTSLYLINVLLCNPATGKFRQLPPSYLLLPSRPQGKFQLESIFGGLGFGYDCK 185

Query: 542  TKDYKVVQIASYPLKPPKIQVYKMSTDSWTIIDNTTPTLSGFVPNHVEFKVYSLSCGKWT 721
             KDYKVVQI         I+  + S D               +P+  E  VY+++   W 
Sbjct: 186  AKDYKVVQI---------IENCEYSDDQQYYYHRIA------LPHTAE--VYTMAANSWR 228

Query: 722  VMETSLNDVYMDVNPISRIHIRGPWYSSPVPLKGAFHFLAVVPLPIYSDYEDQSFIAVVS 901
            V++  ++            H     YSS V L G F++ A+         + + +I  +S
Sbjct: 229  VIKIDISS--------ETYH-----YSSSVYLNGFFYWFAI---------DGEKYI--LS 264

Query: 902  FDLKDEQLRLIDVLGFDMVPHSLKGITFGLLNESLMLVCT-------KRHTCDIWVMNEY 1060
            FDL DE    I +            I   L N+S+   C+           C+IWVM++Y
Sbjct: 265  FDLGDEIFHRIQLPSRRESDFEFSNIF--LCNKSIASFCSCCDPSDEDSTLCEIWVMDDY 322

Query: 1061 -GIHESWTKQFSFTEFPKFLWPMEYWKDNILLM------AETLHDQ-GRLSILHDFFRPP 1216
              +  SWTK  +F        P  +WK + LLM      A T +   G L+ LH    PP
Sbjct: 323  DAVKRSWTKLLTFGPLKDIENPFTFWKTDELLMVAAGGRATTYNSSTGNLNYLH---IPP 379

Query: 1217 TLHDTR 1234
             L++ R
Sbjct: 380  ILNEVR 385


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