BLASTX nr result

ID: Panax21_contig00018135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018135
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315962.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002311431.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_003591834.1| Coiled-coil domain-containing protein [Medic...    59   4e-07
gb|AFK38709.1| unknown [Lotus japonicus]                               59   5e-07
gb|AFK39764.1| unknown [Medicago truncatula]                           58   7e-07

>ref|XP_002315962.1| predicted protein [Populus trichocarpa] gi|222865002|gb|EEF02133.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/42 (69%), Positives = 35/42 (83%)
 Frame = -2

Query: 308 KRLELEGKRRKINAATASNLLVGGFKPSSWARSTISSGRHNR 183
           KRLELE KRRKI+A+ ASNLL GGFKPSSW++ T+S  RH +
Sbjct: 264 KRLELESKRRKISASAASNLLTGGFKPSSWSQGTVSGSRHKQ 305


>ref|XP_002311431.1| predicted protein [Populus trichocarpa] gi|222851251|gb|EEE88798.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
 Frame = -2

Query: 365 KRALIKAAXXXXXXXXXXS---KRLELEGKRRKINAATASNLLVGGFKPSSWARSTISSG 195
           KRALI AA              KRLELE KRRKI+AA A+NLL GGFKPSSW++ T+S  
Sbjct: 242 KRALISAASIFPGSSGSSMSNKKRLELESKRRKISAAAATNLLTGGFKPSSWSQGTVSCS 301

Query: 194 RHNR 183
           +  +
Sbjct: 302 KRKQ 305


>ref|XP_003591834.1| Coiled-coil domain-containing protein [Medicago truncatula]
           gi|355480882|gb|AES62085.1| Coiled-coil
           domain-containing protein [Medicago truncatula]
          Length = 312

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
 Frame = -2

Query: 365 KRALIKAAXXXXXXXXXXS---KRLELEGKRRKINAATASNLLVGGFKPSSWARSTISSG 195
           KRALI AA              +RLELE KRRKI+A+TAS+LL GG+KPSSW++  +  G
Sbjct: 242 KRALINAAPIFPGLSVSSMSGKRRLELESKRRKISASTASSLLAGGYKPSSWSQGAVLPG 301

Query: 194 R 192
           R
Sbjct: 302 R 302


>gb|AFK38709.1| unknown [Lotus japonicus]
          Length = 310

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = -2

Query: 365 KRALIKAAXXXXXXXXXXSKR-LELEGKRRKINAATASNLLVGGFKPSSWARSTISSGR 192
           KRALI +A           KR LELE KRRKI+A  AS+LL GG KPSSW++ TI S R
Sbjct: 242 KRALINSASIFPSSSSTSDKRRLELESKRRKISATAASSLLTGGLKPSSWSQGTIPSSR 300


>gb|AFK39764.1| unknown [Medicago truncatula]
          Length = 188

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
 Frame = -2

Query: 365 KRALIKAAXXXXXXXXXXS---KRLELEGKRRKINAATASNLLVGGFKPSSWARSTISSG 195
           KRALI AA              +RLELE KRRKI+A+TAS+LL GG+KPSSW +  +  G
Sbjct: 118 KRALINAAPIFPGLSVSSMSGKRRLELESKRRKISASTASSLLAGGYKPSSWPQGAVLPG 177

Query: 194 R 192
           R
Sbjct: 178 R 178


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