BLASTX nr result

ID: Panax21_contig00018127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018127
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515648.1| zinc finger protein, putative [Ricinus commu...    80   2e-13
emb|CBI23042.3| unnamed protein product [Vitis vinifera]               80   3e-13
ref|XP_002317793.1| f-box family protein [Populus trichocarpa] g...    80   3e-13
ref|XP_003556422.1| PREDICTED: dof zinc finger protein DOF4.6-li...    75   9e-12
ref|XP_003556421.1| PREDICTED: dof zinc finger protein DOF4.6-li...    75   9e-12

>ref|XP_002515648.1| zinc finger protein, putative [Ricinus communis]
           gi|223545191|gb|EEF46700.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 298

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 69/207 (33%), Positives = 84/207 (40%), Gaps = 9/207 (4%)
 Frame = -3

Query: 599 CKTCRRYWTEGGSLRNVPVGGGXXXXXXXXXXXXXXXXXKINKSS-------TNSQNPNN 441
           CKTCRRYWTEGGSLRNVPVGGG                  IN           + QNPNN
Sbjct: 70  CKTCRRYWTEGGSLRNVPVGGGSRKNKRSSASSSSSKKLIINPPDLTPQIGFLHHQNPNN 129

Query: 440 NKIVFHEGQDLNLAYPPPTIP--EFVEFPXXXXXXSYHHHIPEIFKXXXXXXXXXXXXXX 267
           N I  H GQDLNLAY PP+    E+              H                    
Sbjct: 130 N-IKIHHGQDLNLAYAPPSTENHEYGNMSEFIDVTRSKTHFLNPSPAAMDQLLKTGMSSR 188

Query: 266 XXMINPPALDSINTTPVVYSSSSTIATSGQLPNFQEFSRPSGLDFSLDHHVLIGNTLQGV 87
             M+ P     ++  P+V S S+T+  S     F        L+F L+      ++  G 
Sbjct: 189 GLMLGP----FMSMQPLV-SDSNTVVFSSSSAGFSLPELKPTLNFCLEG--FNSSSEYGS 241

Query: 86  NHHQESSIISNSHEKLFFPFEDLKQRP 6
           N HQ       +  +L FP EDLKQ P
Sbjct: 242 NAHQ-----GTAGARLLFPVEDLKQVP 263


>emb|CBI23042.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 77/207 (37%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
 Frame = -3

Query: 599 CKTCRRYWTEGGSLRNVPVGGGXXXXXXXXXXXXXXXXXKINKS-----------STNSQ 453
           CKTCRRYWTEGGSLRNVPVGGG                   +K            S+ SQ
Sbjct: 62  CKTCRRYWTEGGSLRNVPVGGGSRKNKRSTSSSSSSSSPASSKKLLPDHLITRFPSSASQ 121

Query: 452 NPNNNKIVFHEGQDLNLAYPPPTIPEFVEFPXXXXXXSYHHHIPEIFKXXXXXXXXXXXX 273
           NP       HEGQDLNLA+PPP  PE            Y++ I E               
Sbjct: 122 NPK-----IHEGQDLNLAFPPP--PE-----------DYNNSISEF-------------- 149

Query: 272 XXXXMINPPALDSINTTPVVYSSSSTIATSGQLPNFQEFSRPSGLDFSLDHHVLIGNTLQ 93
                     L   +  P+  S S++I +SG  P  QEF +P+ L+FSLD       +LQ
Sbjct: 150 --------ADLGLGSFMPMSVSDSNSIYSSG-FP-LQEF-KPT-LNFSLDGFQSGYGSLQ 197

Query: 92  GVNHHQESSIISNSHEKLFFPFEDLKQ 12
           GV   QES        +L FP EDLKQ
Sbjct: 198 GV---QESG------ARLLFPLEDLKQ 215


>ref|XP_002317793.1| f-box family protein [Populus trichocarpa]
           gi|222858466|gb|EEE96013.1| f-box family protein
           [Populus trichocarpa]
          Length = 297

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 71/218 (32%), Positives = 89/218 (40%), Gaps = 21/218 (9%)
 Frame = -3

Query: 599 CKTCRRYWTEGGSLRNVPVGGGXXXXXXXXXXXXXXXXXKI------------NKSSTNS 456
           CKTCRRYWT GGSLRNVPVGGG                               N   + S
Sbjct: 64  CKTCRRYWTAGGSLRNVPVGGGSRKNKRSSSTASTSAAGAAASKKFPLDLTQPNLPHSAS 123

Query: 455 QNPNNNKIVFHEGQDLNLAYPP-----PTIPEFVEFPXXXXXXSYHHHIPEIF----KXX 303
           QNP       HEGQDLNLAYPP       + EFVE P        HH  P          
Sbjct: 124 QNPK-----IHEGQDLNLAYPPSADDYSNLSEFVEIPFDTESNKTHHQNPNPSSTSPSHH 178

Query: 302 XXXXXXXXXXXXXXMINPPALDSINTTPVVYSSSSTIATSGQLPNFQEFSRPSGLDFSLD 123
                          +N     +  + P +  S++T+ ++G  P  QEF   S  +FSL+
Sbjct: 179 HHHHVSPMEFLKSTAMNSRGFSAFMSIPPLSDSNNTMFSTG-FP-LQEFK--STQNFSLE 234

Query: 122 HHVLIGNTLQGVNHHQESSIISNSHEKLFFPFEDLKQR 9
                 +  QGV+    S+       +L FP EDLKQ+
Sbjct: 235 GLESGYSNTQGVHETCGSA-------RLLFPIEDLKQQ 265


>ref|XP_003556422.1| PREDICTED: dof zinc finger protein DOF4.6-like isoform 2 [Glycine
           max]
          Length = 293

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 16/92 (17%)
 Frame = -3

Query: 599 CKTCRRYWTEGGSLRNVPVGGGXXXXXXXXXXXXXXXXXKINKSSTN------------- 459
           CKTCRRYWTEGG+LRN+PVGGG                   N +STN             
Sbjct: 58  CKTCRRYWTEGGTLRNIPVGGGSRKNKRSSASCSTPNNSHNNNNSTNKKLLSDLVITPPT 117

Query: 458 ---SQNPNNNKIVFHEGQDLNLAYPPPTIPEF 372
              +QNPN+N  + H+GQDLNLA+P  T P+F
Sbjct: 118 LSHTQNPNSNNAI-HQGQDLNLAFPSST-PDF 147


>ref|XP_003556421.1| PREDICTED: dof zinc finger protein DOF4.6-like isoform 1 [Glycine
           max]
          Length = 302

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 41/92 (44%), Positives = 50/92 (54%), Gaps = 16/92 (17%)
 Frame = -3

Query: 599 CKTCRRYWTEGGSLRNVPVGGGXXXXXXXXXXXXXXXXXKINKSSTN------------- 459
           CKTCRRYWTEGG+LRN+PVGGG                   N +STN             
Sbjct: 67  CKTCRRYWTEGGTLRNIPVGGGSRKNKRSSASCSTPNNSHNNNNSTNKKLLSDLVITPPT 126

Query: 458 ---SQNPNNNKIVFHEGQDLNLAYPPPTIPEF 372
              +QNPN+N  + H+GQDLNLA+P  T P+F
Sbjct: 127 LSHTQNPNSNNAI-HQGQDLNLAFPSST-PDF 156


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