BLASTX nr result

ID: Panax21_contig00018119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018119
         (1802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi...   479   e-133
emb|CBI38862.3| unnamed protein product [Vitis vinifera]              477   e-132
ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|2...   463   e-128
ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containi...   451   e-124
ref|XP_003552343.1| PREDICTED: pentatricopeptide repeat-containi...   437   e-120

>ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like
            [Vitis vinifera]
          Length = 352

 Score =  479 bits (1234), Expect = e-133
 Identities = 243/344 (70%), Positives = 283/344 (82%)
 Frame = +1

Query: 304  FRWVEIGPDITEAQKEAISRLPPKMTNRCKTLLKQIICFSPEKTSLSLLLAAWVRSTIPR 483
            ++W+EIGP+ITEAQK  IS++  KMT RCK L+KQIICFSPE+ SLS LLAAWV+   PR
Sbjct: 9    YKWIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERSLSDLLAAWVKIMKPR 68

Query: 484  RADWLSVLKELSILNHPLYFEVAELALLEDSFEPNVRDYTKIIHAYAKQNRLQDAENTLL 663
            RADWLSVLKEL  L+HPL  EVAELALLE+SFE N+RDYTKII  Y KQNRLQDAENTL 
Sbjct: 69   RADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTLS 128

Query: 664  AMKIRGFTSDQVTLTALIHMYSKAGNLKLAEDTFEEMKLLGQPLDKRLYGSMVMAYIRAG 843
            AMK RGF  DQVTLTA+I+MYSKAGNL+LAE TFEE+KLLG PLDKR YGSM+MAYIRAG
Sbjct: 129  AMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRAG 188

Query: 844  MFDQGESLLREMGAQQIYAGREVYKALLRAYSMIGDCEGAQRIFDAIQLAGITPDVKLCG 1023
            M DQGE L++EM A++IYAGREVYKALLRAYS   D EGAQR+FDAIQ AGI+PDVKLC 
Sbjct: 189  MPDQGEILVKEMEAKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCA 248

Query: 1024 LLINAYVVAGLSREAAIAFENLRRAGLKPNDKCVTLILTAYHQENKLNKALDFLIDLERD 1203
            LLINAY VAG +++A +AFEN+RR+GLKPNDK + L+L AY +ENKLNKALDFLIDLERD
Sbjct: 249  LLINAYRVAGQTQKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERD 308

Query: 1204 GIMLEKEASEILAGWFRSXXXXXXXXXXXRDYASNEAKTKAPPA 1335
            GI+L KEASE+LA WF+            R+Y++ EA  +  P+
Sbjct: 309  GIVLGKEASELLAAWFQRLGVVKEVELVLREYSAKEASCEVHPS 352


>emb|CBI38862.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  477 bits (1228), Expect = e-132
 Identities = 242/337 (71%), Positives = 280/337 (83%)
 Frame = +1

Query: 304  FRWVEIGPDITEAQKEAISRLPPKMTNRCKTLLKQIICFSPEKTSLSLLLAAWVRSTIPR 483
            ++W+EIGP+ITEAQK  IS++  KMT RCK L+KQIICFSPE+ SLS LLAAWV+   PR
Sbjct: 9    YKWIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERSLSDLLAAWVKIMKPR 68

Query: 484  RADWLSVLKELSILNHPLYFEVAELALLEDSFEPNVRDYTKIIHAYAKQNRLQDAENTLL 663
            RADWLSVLKEL  L+HPL  EVAELALLE+SFE N+RDYTKII  Y KQNRLQDAENTL 
Sbjct: 69   RADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTLS 128

Query: 664  AMKIRGFTSDQVTLTALIHMYSKAGNLKLAEDTFEEMKLLGQPLDKRLYGSMVMAYIRAG 843
            AMK RGF  DQVTLTA+I+MYSKAGNL+LAE TFEE+KLLG PLDKR YGSM+MAYIRAG
Sbjct: 129  AMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRAG 188

Query: 844  MFDQGESLLREMGAQQIYAGREVYKALLRAYSMIGDCEGAQRIFDAIQLAGITPDVKLCG 1023
            M DQGE L++EM A++IYAGREVYKALLRAYS   D EGAQR+FDAIQ AGI+PDVKLC 
Sbjct: 189  MPDQGEILVKEMEAKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCA 248

Query: 1024 LLINAYVVAGLSREAAIAFENLRRAGLKPNDKCVTLILTAYHQENKLNKALDFLIDLERD 1203
            LLINAY VAG +++A +AFEN+RR+GLKPNDK + L+L AY +ENKLNKALDFLIDLERD
Sbjct: 249  LLINAYRVAGQTQKAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERD 308

Query: 1204 GIMLEKEASEILAGWFRSXXXXXXXXXXXRDYASNEA 1314
            GI+L KEASE+LA WF+            R+Y++ EA
Sbjct: 309  GIVLGKEASELLAAWFQRLGVVKEVELVLREYSAKEA 345


>ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|222861503|gb|EEE99045.1|
            predicted protein [Populus trichocarpa]
          Length = 407

 Score =  463 bits (1192), Expect = e-128
 Identities = 234/401 (58%), Positives = 293/401 (73%)
 Frame = +1

Query: 103  NMFALSNCVCPVSYSSKRKQQYQLWGNTFMKNPMNFGNCKLQLRPALVGSNVXXXXXXXX 282
            N+   S+  CP+    K+       GN+  + P+   +CK Q++P L   NV        
Sbjct: 7    NILPFSSPTCPLHSEPKKTSNLHFLGNSLCQQPVTLTSCKSQIQPVLAAINVEEKVEGEI 66

Query: 283  XXXXXPWFRWVEIGPDITEAQKEAISRLPPKMTNRCKTLLKQIICFSPEKTSLSLLLAAW 462
                 P FRWVEIGP+I E QK+AIS+LP KMT RCK L++QIICF+ +K SL  LL+AW
Sbjct: 67   GKEK-PKFRWVEIGPNIPEEQKQAISQLPFKMTKRCKALMRQIICFNDKKGSLRGLLSAW 125

Query: 463  VRSTIPRRADWLSVLKELSILNHPLYFEVAELALLEDSFEPNVRDYTKIIHAYAKQNRLQ 642
            V+   PRR DWLS+LKEL+ + HPLY EV E+ALLE+SFE NVRDYTKIIH Y   N+L+
Sbjct: 126  VKIMKPRRKDWLSILKELNKMEHPLYLEVVEIALLEESFEANVRDYTKIIHFYGMNNQLE 185

Query: 643  DAENTLLAMKIRGFTSDQVTLTALIHMYSKAGNLKLAEDTFEEMKLLGQPLDKRLYGSMV 822
            +AE T LAM+ RGF SDQVTLTA+IHMYSK GNL LAE+TFEE+KLLGQPLD+R YGSM+
Sbjct: 186  EAERTRLAMEERGFVSDQVTLTAMIHMYSKGGNLTLAEETFEELKLLGQPLDRRSYGSMI 245

Query: 823  MAYIRAGMFDQGESLLREMGAQQIYAGREVYKALLRAYSMIGDCEGAQRIFDAIQLAGIT 1002
            MAYIRAGM ++GE +LREM AQ+I AG EVYKALLRAYS+IGD +GAQR+FDAIQLAGI 
Sbjct: 246  MAYIRAGMPEKGEMILREMDAQEIRAGSEVYKALLRAYSIIGDADGAQRVFDAIQLAGIP 305

Query: 1003 PDVKLCGLLINAYVVAGLSREAAIAFENLRRAGLKPNDKCVTLILTAYHQENKLNKALDF 1182
            PD + C +L+NAY +AG S+ A   FEN+ RAG++P D+CV L+L AY +ENKLN+ALDF
Sbjct: 306  PDDRTCAVLLNAYGMAGQSQNAYATFENMWRAGIEPTDRCVALVLAAYEKENKLNQALDF 365

Query: 1183 LIDLERDGIMLEKEASEILAGWFRSXXXXXXXXXXXRDYAS 1305
            LI LER+ +++ KEASE+LA WF             R+YA+
Sbjct: 366  LIGLEREKLIIGKEASEVLAEWFGRLGVVKEVELVLREYAA 406


>ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like
            [Cucumis sativus] gi|449480346|ref|XP_004155867.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g01970-like [Cucumis sativus]
          Length = 404

 Score =  451 bits (1160), Expect = e-124
 Identities = 220/338 (65%), Positives = 268/338 (79%)
 Frame = +1

Query: 298  PWFRWVEIGPDITEAQKEAISRLPPKMTNRCKTLLKQIICFSPEKTSLSLLLAAWVRSTI 477
            P FRWVE+G DITE QK+AIS+LPPKMT RCK ++KQIICFSP+K  LS +LAAWVR   
Sbjct: 64   PRFRWVEVGYDITETQKQAISQLPPKMTKRCKAVMKQIICFSPQKGELSDMLAAWVRIMK 123

Query: 478  PRRADWLSVLKELSILNHPLYFEVAELALLEDSFEPNVRDYTKIIHAYAKQNRLQDAENT 657
            P RADWL VLK L ILNHPLY +VAE AL E +FE N RDYTKIIH Y KQN+L+DAE  
Sbjct: 124  PERADWLLVLKHLRILNHPLYIQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDAEKV 183

Query: 658  LLAMKIRGFTSDQVTLTALIHMYSKAGNLKLAEDTFEEMKLLGQPLDKRLYGSMVMAYIR 837
            LL+M+ RGF  DQ+TLT +IH+YSKA  L LA+ TFEE+KLL QPLDKR +G+M+MAY+R
Sbjct: 184  LLSMRERGFVCDQITLTTMIHIYSKADKLNLAKQTFEELKLLEQPLDKRSFGAMIMAYVR 243

Query: 838  AGMFDQGESLLREMGAQQIYAGREVYKALLRAYSMIGDCEGAQRIFDAIQLAGITPDVKL 1017
            AG  ++GE +L+EM A+ IYAG EVYKALLRAYSM+G+ EGAQR+FDAIQLA ITPD KL
Sbjct: 244  AGFPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQLAAITPDEKL 303

Query: 1018 CGLLINAYVVAGLSREAAIAFENLRRAGLKPNDKCVTLILTAYHQENKLNKALDFLIDLE 1197
            CGLLINAY++AG SREA IAF+N+RRAG++P+DKC+ L L+AY +EN+LN AL+ LIDLE
Sbjct: 304  CGLLINAYLMAGQSREAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNSALELLIDLE 363

Query: 1198 RDGIMLEKEASEILAGWFRSXXXXXXXXXXXRDYASNE 1311
            +D +M+ KEAS+ILA W +            R+Y   E
Sbjct: 364  KDNVMVGKEASKILAAWLKRLGVVEEVEIVLREYTEKE 401


>ref|XP_003552343.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like
            [Glycine max]
          Length = 414

 Score =  437 bits (1125), Expect = e-120
 Identities = 218/377 (57%), Positives = 282/377 (74%)
 Frame = +1

Query: 178  GNTFMKNPMNFGNCKLQLRPALVGSNVXXXXXXXXXXXXXPWFRWVEIGPDITEAQKEAI 357
            GN+  +NP+ FG  K +    LV   +               +RW+E+G ++ + Q++AI
Sbjct: 34   GNSLCQNPVYFGLRKHRFDSVLVSVGLEEVVKEEGKEDNDRRYRWIEVGKNVPKEQQQAI 93

Query: 358  SRLPPKMTNRCKTLLKQIICFSPEKTSLSLLLAAWVRSTIPRRADWLSVLKELSILNHPL 537
            S+LP +M +RCK L++QIIC+S EK S+S LL +WV+   P RADWLSVLKEL I  HP+
Sbjct: 94   SKLPFRMADRCKALMRQIICYSAEKGSMSDLLRSWVKLMKPTRADWLSVLKELKIREHPV 153

Query: 538  YFEVAELALLEDSFEPNVRDYTKIIHAYAKQNRLQDAENTLLAMKIRGFTSDQVTLTALI 717
            Y EVA+ AL+E+SFE N+RDYTKIIH Y + N L+DAE  L  MK RGF  DQV LT ++
Sbjct: 154  YLEVAKHALMEESFEVNIRDYTKIIHYYGEHNLLEDAEKFLTLMKQRGFIYDQVILTTMV 213

Query: 718  HMYSKAGNLKLAEDTFEEMKLLGQPLDKRLYGSMVMAYIRAGMFDQGESLLREMGAQQIY 897
            HMYSKAGN   A++ FEE+KLLG+PLDKR YGSM+MAYIRAGM ++GE+LL+EM AQ+I 
Sbjct: 214  HMYSKAGNHDRAKEYFEEIKLLGKPLDKRSYGSMIMAYIRAGMPEEGENLLQEMEAQEIL 273

Query: 898  AGREVYKALLRAYSMIGDCEGAQRIFDAIQLAGITPDVKLCGLLINAYVVAGLSREAAIA 1077
            AG EVYKALLRAYSMIG+ EGAQR+FDAIQLAGITPD K+C L++NAYV+AG S++A IA
Sbjct: 274  AGSEVYKALLRAYSMIGNAEGAQRVFDAIQLAGITPDDKICSLVVNAYVMAGQSQKALIA 333

Query: 1078 FENLRRAGLKPNDKCVTLILTAYHQENKLNKALDFLIDLERDGIMLEKEASEILAGWFRS 1257
            FEN+RRAG+KP+DKC+  +L AY +E+K+N AL+FLIDLERDGIM+E+EAS +LA WFR 
Sbjct: 334  FENMRRAGIKPSDKCIASVLVAYEKESKINTALEFLIDLERDGIMVEEEASAVLAKWFRK 393

Query: 1258 XXXXXXXXXXXRDYASN 1308
                       RD+ ++
Sbjct: 394  LGVVEEVELVLRDFVTS 410


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