BLASTX nr result

ID: Panax21_contig00018115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018115
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301150.1| predicted protein [Populus trichocarpa] gi|2...   249   1e-64
ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   249   2e-64
gb|AAL16172.1|AF428404_1 AT3g01400/T13O15_4 [Arabidopsis thalian...   248   3e-64
ref|NP_566136.1| armadillo/beta-catenin-like repeat-containing p...   248   3e-64
ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4...   247   6e-64

>ref|XP_002301150.1| predicted protein [Populus trichocarpa] gi|222842876|gb|EEE80423.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  249 bits (637), Expect = 1e-64
 Identities = 126/150 (84%), Positives = 141/150 (94%)
 Frame = +2

Query: 5   AFSDCNSDRSGEFPTASSQSRRLILACASENSDELINQLVSGLESCSIDEQKQAAMELRL 184
           AFSDCNSD+SGEFP ++SQSRRL+L+CA++NSD+LI QLVS LESCSIDEQKQAAME+RL
Sbjct: 29  AFSDCNSDKSGEFPASASQSRRLLLSCAADNSDDLIRQLVSDLESCSIDEQKQAAMEIRL 88

Query: 185 LAKNKPENRIKIARAGAIKPLISLITSSDSHLQEYGVTAILNLSLCDENKELIASAGAIK 364
           LAKNKPENR+KIA+AGAIKPLISLI+SSDS LQEYGVTAILNLSLCDENK LIAS+GAIK
Sbjct: 89  LAKNKPENRLKIAKAGAIKPLISLISSSDSQLQEYGVTAILNLSLCDENKGLIASSGAIK 148

Query: 365 PLVKALKIGNPTAKENAACALLRLSQFEDN 454
           PLV+ALK G  TAKENAACALLRLSQ E+N
Sbjct: 149 PLVRALKTGTSTAKENAACALLRLSQMEEN 178


>ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 352

 Score =  249 bits (635), Expect = 2e-64
 Identities = 125/151 (82%), Positives = 140/151 (92%)
 Frame = +2

Query: 2   TAFSDCNSDRSGEFPTASSQSRRLILACASENSDELINQLVSGLESCSIDEQKQAAMELR 181
           +AFSDCNSDRSGEFPTASS+SRRL++ACA+ENSD+ I QLV  LESCSIDEQKQAAME+R
Sbjct: 26  SAFSDCNSDRSGEFPTASSESRRLLIACAAENSDDFIRQLVLDLESCSIDEQKQAAMEIR 85

Query: 182 LLAKNKPENRIKIARAGAIKPLISLITSSDSHLQEYGVTAILNLSLCDENKELIASAGAI 361
           LLAKNKPENR+KI +AGA+KPLISLI+ SDS LQEYGVTAILNLSLCDENKE+IAS+GAI
Sbjct: 86  LLAKNKPENRLKIVKAGALKPLISLISCSDSQLQEYGVTAILNLSLCDENKEVIASSGAI 145

Query: 362 KPLVKALKIGNPTAKENAACALLRLSQFEDN 454
           KPLV+ALK G  TAKENAACALLRLSQ E+N
Sbjct: 146 KPLVRALKTGTSTAKENAACALLRLSQVEEN 176


>gb|AAL16172.1|AF428404_1 AT3g01400/T13O15_4 [Arabidopsis thaliana]
           gi|21928049|gb|AAM78053.1| AT3g01400/T13O15_4
           [Arabidopsis thaliana]
          Length = 355

 Score =  248 bits (634), Expect = 3e-64
 Identities = 129/152 (84%), Positives = 143/152 (94%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   TAFSDCNSDRSGEFPTASSQSRRLILACASENSDELINQLVSGLESC-SIDEQKQAAMEL 178
           +AFSDCNSDRSGEFPTASS+SRRL+L+CASENSD+LIN LVS L+S  SIDEQKQAAME+
Sbjct: 28  SAFSDCNSDRSGEFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEI 87

Query: 179 RLLAKNKPENRIKIARAGAIKPLISLITSSDSHLQEYGVTAILNLSLCDENKELIASAGA 358
           RLL+KNKPENRIKIA+AGAIKPLISLI+SSD  LQEYGVTAILNLSLCDENKE IAS+GA
Sbjct: 88  RLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCDENKESIASSGA 147

Query: 359 IKPLVKALKIGNPTAKENAACALLRLSQFEDN 454
           IKPLV+ALK+G PTAKENAACALLRLSQ E+N
Sbjct: 148 IKPLVRALKMGTPTAKENAACALLRLSQIEEN 179


>ref|NP_566136.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
           thaliana] gi|6692260|gb|AAF24610.1|AC010870_3 unknown
           protein [Arabidopsis thaliana]
           gi|332640140|gb|AEE73661.1| armadillo/beta-catenin-like
           repeat-containing protein [Arabidopsis thaliana]
          Length = 355

 Score =  248 bits (634), Expect = 3e-64
 Identities = 129/152 (84%), Positives = 143/152 (94%), Gaps = 1/152 (0%)
 Frame = +2

Query: 2   TAFSDCNSDRSGEFPTASSQSRRLILACASENSDELINQLVSGLESC-SIDEQKQAAMEL 178
           +AFSDCNSDRSGEFPTASS+SRRL+L+CASENSD+LIN LVS L+S  SIDEQKQAAME+
Sbjct: 28  SAFSDCNSDRSGEFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEI 87

Query: 179 RLLAKNKPENRIKIARAGAIKPLISLITSSDSHLQEYGVTAILNLSLCDENKELIASAGA 358
           RLL+KNKPENRIKIA+AGAIKPLISLI+SSD  LQEYGVTAILNLSLCDENKE IAS+GA
Sbjct: 88  RLLSKNKPENRIKIAKAGAIKPLISLISSSDLQLQEYGVTAILNLSLCDENKESIASSGA 147

Query: 359 IKPLVKALKIGNPTAKENAACALLRLSQFEDN 454
           IKPLV+ALK+G PTAKENAACALLRLSQ E+N
Sbjct: 148 IKPLVRALKMGTPTAKENAACALLRLSQIEEN 179


>ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
           gi|449482708|ref|XP_004156379.1| PREDICTED: U-box
           domain-containing protein 4-like [Cucumis sativus]
          Length = 352

 Score =  247 bits (631), Expect = 6e-64
 Identities = 124/150 (82%), Positives = 139/150 (92%)
 Frame = +2

Query: 5   AFSDCNSDRSGEFPTASSQSRRLILACASENSDELINQLVSGLESCSIDEQKQAAMELRL 184
           AFSDCNSDRSGEFPTASSQSRRL++ACAS+NSDELI  LV  LESCSI+EQKQAAME+RL
Sbjct: 27  AFSDCNSDRSGEFPTASSQSRRLLIACASDNSDELIRHLVLDLESCSIEEQKQAAMEIRL 86

Query: 185 LAKNKPENRIKIARAGAIKPLISLITSSDSHLQEYGVTAILNLSLCDENKELIASAGAIK 364
           LAKNKPENR+KIA+AGA++PLISLI+ +D  LQEYGVTAILNLSLCDENKELIA++GAIK
Sbjct: 87  LAKNKPENRLKIAKAGAVRPLISLISCTDPQLQEYGVTAILNLSLCDENKELIAASGAIK 146

Query: 365 PLVKALKIGNPTAKENAACALLRLSQFEDN 454
           PLV+AL  G PTAKENAACALLRLSQ E+N
Sbjct: 147 PLVRALMSGTPTAKENAACALLRLSQMEEN 176


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