BLASTX nr result
ID: Panax21_contig00018113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00018113
(1250 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282117.1| PREDICTED: protein terminal ear1-like [Vitis... 314 3e-83
ref|XP_002515045.1| arginine/serine-rich splicing factor, putati... 282 1e-73
gb|ABR19818.1| terminal ear1-like 2 protein [Populus tremula x P... 278 2e-72
ref|XP_002314579.1| predicted protein [Populus trichocarpa] gi|2... 276 1e-71
ref|XP_002311749.1| predicted protein [Populus trichocarpa] gi|2... 275 1e-71
>ref|XP_002282117.1| PREDICTED: protein terminal ear1-like [Vitis vinifera]
Length = 658
Score = 314 bits (804), Expect = 3e-83
Identities = 182/348 (52%), Positives = 216/348 (62%), Gaps = 13/348 (3%)
Frame = -1
Query: 1085 MGDTGFVRFPGTLDPRAQEFVPTNHXXXXXXXXXXXXXXXXXXXXPVMPFCDTVLGYPQF 906
MG+TG RF G LDP AQEF P N P+ +PQF
Sbjct: 1 MGETGTSRFLGNLDPSAQEFRPRN-------PYIQNQMSLSVPTQIYYPYTHP---HPQF 50
Query: 905 PAPPAYVRPAGADXXXXXXXXXXSMTPCRTLLLSSVPTDVSESTVRRELEVFGDVRAVQM 726
A AYVRP S TP R LLLSSVPTDVSE TVRRELE FG+VR+VQ+
Sbjct: 51 VASSAYVRPIAGKPPLSPLMSPLSATPTRALLLSSVPTDVSEVTVRRELEAFGEVRSVQI 110
Query: 725 DRVRDGIVTVHFYDLRHAQAALVEIQDQHMQQQCRLKKHFDAVLTHNLYDPA-NFPVPLP 549
+RV DGIV V FYDLRHAQA L E+++QHMQQQ RLKKH+D++LT L + VPLP
Sbjct: 111 ERVCDGIVAVSFYDLRHAQACLTEVREQHMQQQSRLKKHYDSLLTRKLASQVEHLLVPLP 170
Query: 548 PPGRGQISGRAVWAQFTIPVTVGYPEGYNQGTLVLFNVDSQVPTKYLKEIFEAFGSIKEV 369
PP RG I+GRAVWAQF IPV+ + YNQGTLV+FN+DS+V T L++IFE FGSIKE+
Sbjct: 171 PPARGLIAGRAVWAQFMIPVSTCMLDDYNQGTLVIFNLDSEVSTSSLRDIFETFGSIKEL 230
Query: 368 RETPLKRHQRFIEFYDTREAANALAEMDGKEIHGQHVIIEFSRPGGHNKRFSKA------ 207
RETPLKRHQRF+EF+D R+AA AL EM+GK+I G+ V+IEFSRPGGH RF A
Sbjct: 231 RETPLKRHQRFVEFFDIRDAARALREMNGKKIQGKRVVIEFSRPGGHGWRFFNAISTTAL 290
Query: 206 --TPNDNNKFNFMPN---YSARSPRCLVESP-PLSEGRSRSYVHPHCH 81
T + N P+ Y + RC P L E S V PH +
Sbjct: 291 SSTYSTTNSTVISPSRLAYHTVTSRCPPALPCKLPEKSSHFNVPPHSY 338
>ref|XP_002515045.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223546096|gb|EEF47599.1| arginine/serine-rich splicing
factor, putative [Ricinus communis]
Length = 622
Score = 282 bits (721), Expect = 1e-73
Identities = 172/373 (46%), Positives = 216/373 (57%), Gaps = 35/373 (9%)
Frame = -1
Query: 1085 MGDTGFVRFPGTLDPRAQEFVPTN-------------HXXXXXXXXXXXXXXXXXXXXPV 945
M +TG RF G+LDPRAQEF P N H P
Sbjct: 1 MAETGIARFQGSLDPRAQEFRPRNNSLHLNTPTLIHHHHQQQQQQQQQLHIFTPPPPPPP 60
Query: 944 MPFCDTV---------LGYPQF----PAPPAYVRPAGADXXXXXXXXXXSMTPCRTLLLS 804
P + LG+PQ+ P P AY+ S P RTL+LS
Sbjct: 61 PPPAQQLYYPYAPPPSLGFPQYQLAPPQPQAYISTT------VPSLPPQSAAPTRTLVLS 114
Query: 803 SVPTDVSESTVRRELEVFGDVRAVQMDRVRDGIVTVHFYDLRHAQAALVEIQDQHMQQQC 624
SVPT+VSES +RRELEVFG+VR VQM+R+ DGIVTVHFYDLRHA+ ALVEI+++HMQQQ
Sbjct: 115 SVPTEVSESVIRRELEVFGEVRGVQMERISDGIVTVHFYDLRHAEIALVEIREKHMQQQS 174
Query: 623 RLKKHFDAVLTHNLYDPANFPVPLPPPG---RGQISGRAVWAQFTIPVTVGYPEGYNQGT 453
RL+ F A+ +N P + P P P RG I+G AVWAQF IP P+G+N GT
Sbjct: 175 RLRNLFAALDQNNFLAPPSLP-PSPAAAAAARGFIAGCAVWAQFVIPSCNAVPDGHNHGT 233
Query: 452 LVLFNVDSQVPTKYLKEIFEAFGSIKEVRETPLKRHQRFIEFYDTREAANALAEMDGKEI 273
+V+FN+D V T LKEIF+AFG++KE+RETPLK+ QRF+EFYD R+AA AL EM+GKEI
Sbjct: 234 IVVFNLDPNVSTSSLKEIFQAFGAVKELRETPLKKQQRFVEFYDIRDAAKALKEMNGKEI 293
Query: 272 HGQHVIIEFSRPGGHNKRF------SKATPNDNNKFNFMPNYSARSPRCLVESPPLSEGR 111
HG+ V+IEFSRPGG ++F SKA+ + +N N P S +P PP+
Sbjct: 294 HGKQVVIEFSRPGGFGRKFFNGSSTSKAS-SFHNAININPKISRYAPPPPPPPPPVRPNI 352
Query: 110 SRSYVHPHCHSNS 72
S HS+S
Sbjct: 353 SPRPFLAQTHSSS 365
>gb|ABR19818.1| terminal ear1-like 2 protein [Populus tremula x Populus alba]
Length = 677
Score = 278 bits (712), Expect = 2e-72
Identities = 165/332 (49%), Positives = 199/332 (59%), Gaps = 29/332 (8%)
Frame = -1
Query: 1085 MGDTGFVRFPGTLDPRAQEFVPTNHXXXXXXXXXXXXXXXXXXXXP-------------- 948
M + G V+FPG LDPRAQEF P P
Sbjct: 1 MEENGSVQFPGNLDPRAQEFRPRRDNLHNFSPKFLPFGPPTPPLPPPPPPPSQLPHQVYY 60
Query: 947 -----VMPFCDTVLGYPQFP--APPAYVR--------PAGADXXXXXXXXXXSMTPCRTL 813
V+PF D V G+ Q+ PPAYVR P GA P RTL
Sbjct: 61 PYTPQVLPFSDFV-GFAQYDHHIPPAYVRVEPSPPLPPTGA--------------PTRTL 105
Query: 812 LLSSVPTDVSESTVRRELEVFGDVRAVQMDRVRDGIVTVHFYDLRHAQAALVEIQDQHMQ 633
+LSSVP++V+ES ++RELEVFG+VR VQM+RV G VTVHFYDLRHA+ AL EI++QHM
Sbjct: 106 VLSSVPSEVNESLIKRELEVFGEVRGVQMERVGYGTVTVHFYDLRHAERALREIREQHML 165
Query: 632 QQCRLKKHFDAVLTHNLYDPANFPVPLPPPGRGQISGRAVWAQFTIPVTVGYPEGYNQGT 453
Q RL+ F ++ A P PPP RG I+G VWAQF IP P+G NQGT
Sbjct: 166 HQARLRNFFIQNSESISFNIAPTP---PPPARGVIAGCVVWAQFIIPSCNEVPDGQNQGT 222
Query: 452 LVLFNVDSQVPTKYLKEIFEAFGSIKEVRETPLKRHQRFIEFYDTREAANALAEMDGKEI 273
LV+FN+D V T+ LKEIF+AFG++KEVRETPLKRHQRF+EFYD R+AA AL EM+GKEI
Sbjct: 223 LVVFNLDPNVSTRSLKEIFQAFGAVKEVRETPLKRHQRFVEFYDVRDAAKALREMNGKEI 282
Query: 272 HGQHVIIEFSRPGGHNKRFSKATPNDNNKFNF 177
+G+ V IEFSRPGGH KRF A P +K +F
Sbjct: 283 YGKQVDIEFSRPGGHGKRFFNARPRTTSKNSF 314
>ref|XP_002314579.1| predicted protein [Populus trichocarpa] gi|222863619|gb|EEF00750.1|
predicted protein [Populus trichocarpa]
Length = 557
Score = 276 bits (705), Expect = 1e-71
Identities = 153/294 (52%), Positives = 189/294 (64%)
Frame = -1
Query: 1085 MGDTGFVRFPGTLDPRAQEFVPTNHXXXXXXXXXXXXXXXXXXXXPVMPFCDTVLGYPQF 906
M +TGFV FPG LDPRAQEF P ++ P +P +L
Sbjct: 1 MEETGFVPFPGNLDPRAQEFRPRHNNLQDFTTKFPPFGPPPPPPPPQLP---QLLHQYHH 57
Query: 905 PAPPAYVRPAGADXXXXXXXXXXSMTPCRTLLLSSVPTDVSESTVRRELEVFGDVRAVQM 726
PP Y D + P RTL+LSSVP+DVSE+ +RRELEVFG+VR VQM
Sbjct: 58 HVPPMY------DTVGTPLPLPPTGAPTRTLVLSSVPSDVSETLIRRELEVFGEVRGVQM 111
Query: 725 DRVRDGIVTVHFYDLRHAQAALVEIQDQHMQQQCRLKKHFDAVLTHNLYDPANFPVPLPP 546
+RV DGIVTVHFYDLRHA+ AL EI++QHM Q RL+ F N + + + PP
Sbjct: 112 ERVGDGIVTVHFYDLRHAERALREIREQHMLHQARLRNLF----IQNC-ESLSLNIAPPP 166
Query: 545 PGRGQISGRAVWAQFTIPVTVGYPEGYNQGTLVLFNVDSQVPTKYLKEIFEAFGSIKEVR 366
P RG I+G VWAQF IP P+G NQGTLV+FN+D V T+ LKE F+AFG++KE+R
Sbjct: 167 PARGLIAGCVVWAQFIIPSCKAVPDGQNQGTLVVFNLDPNVSTRCLKETFQAFGAVKELR 226
Query: 365 ETPLKRHQRFIEFYDTREAANALAEMDGKEIHGQHVIIEFSRPGGHNKRFSKAT 204
ETPLKRHQRF+EFYD R+AA AL EM+GKEI+G+ V IEFSRPGG+ K+F A+
Sbjct: 227 ETPLKRHQRFVEFYDVRDAAKALGEMNGKEIYGKQVDIEFSRPGGYGKKFFNAS 280
>ref|XP_002311749.1| predicted protein [Populus trichocarpa] gi|222851569|gb|EEE89116.1|
predicted protein [Populus trichocarpa]
Length = 590
Score = 275 bits (704), Expect = 1e-71
Identities = 164/329 (49%), Positives = 197/329 (59%), Gaps = 26/329 (7%)
Frame = -1
Query: 1085 MGDTGFVRFPGTLDPRAQEFVPTNHXXXXXXXXXXXXXXXXXXXXP-------------- 948
M + G V+FPG LDPRAQEF P P
Sbjct: 1 MEENGSVQFPGNLDPRAQEFRPRRDNLHNFSPKFLPFGPPPPPPPPPPPQLPHQVYYTYT 60
Query: 947 --VMPFCDTVLGYPQFP--APPAYVR--------PAGADXXXXXXXXXXSMTPCRTLLLS 804
+PF D V G+ Q+ PPAYV P GA P RTL+LS
Sbjct: 61 PQALPFSDFV-GFVQYDHHIPPAYVSVEPLPPLPPTGA--------------PTRTLVLS 105
Query: 803 SVPTDVSESTVRRELEVFGDVRAVQMDRVRDGIVTVHFYDLRHAQAALVEIQDQHMQQQC 624
SVP++V+ES +RRELEVFG+VR VQM+RV G VTVHFYDLRHA+ AL EI++QHM Q
Sbjct: 106 SVPSEVNESLIRRELEVFGEVRGVQMERVGYGTVTVHFYDLRHAERALREIREQHMLHQA 165
Query: 623 RLKKHFDAVLTHNLYDPANFPVPLPPPGRGQISGRAVWAQFTIPVTVGYPEGYNQGTLVL 444
RL+ F ++ A P PPP RG I+G VWAQF IP P+G NQGTLV+
Sbjct: 166 RLRNFFIQNSESISFNIAPTP---PPPARGVIAGCVVWAQFIIPSCNEVPDGQNQGTLVV 222
Query: 443 FNVDSQVPTKYLKEIFEAFGSIKEVRETPLKRHQRFIEFYDTREAANALAEMDGKEIHGQ 264
FN+D V T+ LKEIF+AFG++KEVRETPLKRHQRFIEFYD R+AA AL EM+GKEI+G+
Sbjct: 223 FNLDPNVSTRSLKEIFQAFGAVKEVRETPLKRHQRFIEFYDVRDAAKALREMNGKEIYGK 282
Query: 263 HVIIEFSRPGGHNKRFSKATPNDNNKFNF 177
V IEFSRPGGH K+F A P +K +F
Sbjct: 283 QVDIEFSRPGGHGKKFFNARPRATSKNSF 311