BLASTX nr result

ID: Panax21_contig00018110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018110
         (1676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]       94   1e-16
emb|CBI17535.3| unnamed protein product [Vitis vinifera]               93   2e-16
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...    93   2e-16
ref|XP_002310221.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-16
ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, p...    90   2e-15

>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 44/45 (97%), Positives = 44/45 (97%)
 Frame = -3

Query: 1674 DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVGI 1540
            DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYG IKRVGI
Sbjct: 125  DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGAIKRVGI 169


>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 1674 DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVGIM 1537
            DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRV ++
Sbjct: 125  DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLI 170


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
            vinifera]
          Length = 514

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 1674 DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVGIM 1537
            DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRV ++
Sbjct: 125  DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLI 170


>ref|XP_002310221.1| predicted protein [Populus trichocarpa] gi|222853124|gb|EEE90671.1|
            predicted protein [Populus trichocarpa]
          Length = 179

 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 42/52 (80%), Positives = 46/52 (88%)
 Frame = -3

Query: 1674 DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVGIMRVPNSG 1519
            DP NDPN+SGDPYKTLFVARL+YETTESRIKREFE+YGPIKRVGI     +G
Sbjct: 125  DPTNDPNVSGDPYKTLFVARLSYETTESRIKREFESYGPIKRVGIFEYTQAG 176


>ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
            communis] gi|223539286|gb|EEF40879.1| U1 small nuclear
            ribonucleoprotein 70 kDa, putative [Ricinus communis]
          Length = 506

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 41/46 (89%), Positives = 45/46 (97%)
 Frame = -3

Query: 1674 DPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVGIM 1537
            DPN+DPNISGDPYKTLFVARLNYETTESRIKREFE+YGPIKRV ++
Sbjct: 125  DPNSDPNISGDPYKTLFVARLNYETTESRIKREFESYGPIKRVRLI 170


Top