BLASTX nr result

ID: Panax21_contig00018102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018102
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520270.1| protein transporter, putative [Ricinus commu...    66   3e-09
ref|XP_002300956.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002285894.1| PREDICTED: TOM1-like protein 2-like [Vitis v...    63   3e-08
gb|AAX96738.1| seed protein B32E [Oryza sativa Japonica Group]         60   2e-07
gb|EEE51810.1| hypothetical protein OsJ_33283 [Oryza sativa Japo...    60   2e-07

>ref|XP_002520270.1| protein transporter, putative [Ricinus communis]
           gi|223540489|gb|EEF42056.1| protein transporter,
           putative [Ricinus communis]
          Length = 520

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 46/135 (34%), Positives = 58/135 (42%)
 Frame = -1

Query: 410 EPEDDFSQLALRSSRDTLQGQGRKPVNGKDXXXXXXXXXXXXXXXXXPNSTEYGMVDYLS 231
           E EDDF+QLA RSSR+  QG+GRKPV+ +                  P S + GM+DYLS
Sbjct: 293 ESEDDFTQLAHRSSRENAQGRGRKPVSVRTEPGRVSPLLPPPPASKRPVSVDSGMIDYLS 352

Query: 230 GDVYSSERTSGASGSTPVXXXXXXXXXXXXXTLPAKLSSPPPSDDFINPTASDEFLNPTA 51
           GD Y S+ +   S  TP                P   +S PPS                +
Sbjct: 353 GDAYKSQGSPEKSDPTPFTVPIHSNKNSSPPYSPTLSASSPPSQAV------------NS 400

Query: 50  SMFSEKQPKDSEPAP 6
           S     QP+  EPAP
Sbjct: 401 SPLFTGQPEYDEPAP 415


>ref|XP_002300956.1| predicted protein [Populus trichocarpa] gi|222842682|gb|EEE80229.1|
           predicted protein [Populus trichocarpa]
          Length = 520

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 41/104 (39%), Positives = 50/104 (48%)
 Frame = -1

Query: 413 EEPEDDFSQLALRSSRDTLQGQGRKPVNGKDXXXXXXXXXXXXXXXXXPNSTEYGMVDYL 234
           +E EDDF+QLA RSSRD  QG G+KPV+ +                  P + E GM+DYL
Sbjct: 291 DESEDDFTQLAHRSSRDNSQGLGQKPVSVRTQPGPVSPFLPPPPLSKNPVNKETGMIDYL 350

Query: 233 SGDVYSSERTSGASGSTPVXXXXXXXXXXXXXTLPAKLSSPPPS 102
           SGDVY SE +   S  TP                P   +S PPS
Sbjct: 351 SGDVYKSEGSPQISEPTPFKVPMHSNVSSSPPYSPTVSASSPPS 394


>ref|XP_002285894.1| PREDICTED: TOM1-like protein 2-like [Vitis vinifera]
          Length = 514

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 50/141 (35%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
 Frame = -1

Query: 413 EEPEDDFSQLALRSSRDTLQGQGRKPVNGKDXXXXXXXXXXXXXXXXXPNSTEYGMVDYL 234
           +E EDDF+QLA RS       QGRK  N K                  P S +  M+DYL
Sbjct: 291 DESEDDFAQLAHRS-------QGRKSANAKPEPLRVSPLIPPPPSSKKPTSADSSMIDYL 343

Query: 233 SGDVYSS--ERTSGASGSTPVXXXXXXXXXXXXXTLPAKLSSPPPSDDFINPTASDEFLN 60
           SGDVY S  ER+   S  TP                   LSS  P   FINPTAS  F  
Sbjct: 344 SGDVYKSKPERSPETSEPTPYAVPSHSNSTNSTSPWTPALSSSSPPSHFINPTASPMF-- 401

Query: 59  PTASMFSEKQP--KDSEPAPT 3
               ++ E  P  K ++P P+
Sbjct: 402 TAHPVYDEPAPMSKSADPLPS 422


>gb|AAX96738.1| seed protein B32E [Oryza sativa Japonica Group]
          Length = 381

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
 Frame = -1

Query: 413 EEPEDDFSQLALRSSRDTLQGQGRKPVNGKDXXXXXXXXXXXXXXXXXPNSTEYGMVDYL 234
           +EPED+FS L+ RS+RD    QG  P   K                  P  TE   VDYL
Sbjct: 107 DEPEDEFSVLSRRSARDGTAAQGNLPSAPKSERPYPSPLLPPPPSSKRPVFTEASSVDYL 166

Query: 233 SGDVYSSERTSG--ASGSTPVXXXXXXXXXXXXXTLPAKLS-SPPPSDDFINPTASDEFL 63
           SGD Y +E+ S    + + P                P+  S S   SDDFINPTA+  F 
Sbjct: 167 SGDSYKTEKVSDDFINPTAPANIPAPSHSKTETNPPPSYDSRSESVSDDFINPTAAPSFS 226

Query: 62  NPTASMFSEKQP 27
            P+  M    +P
Sbjct: 227 MPSRPMSESNRP 238


>gb|EEE51810.1| hypothetical protein OsJ_33283 [Oryza sativa Japonica Group]
          Length = 465

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
 Frame = -1

Query: 413 EEPEDDFSQLALRSSRDTLQGQGRKPVNGKDXXXXXXXXXXXXXXXXXPNSTEYGMVDYL 234
           +EPED+FS L+ RS+RD    QG  P   K                  P  TE   VDYL
Sbjct: 191 DEPEDEFSVLSRRSARDGTAAQGNLPSAPKSERPYPSPLLPPPPSSKRPVFTEASSVDYL 250

Query: 233 SGDVYSSERTSG--ASGSTPVXXXXXXXXXXXXXTLPAKLS-SPPPSDDFINPTASDEFL 63
           SGD Y +E+ S    + + P                P+  S S   SDDFINPTA+  F 
Sbjct: 251 SGDSYKTEKVSDDFINPTAPANIPAPSHSKTETNPPPSYDSRSESVSDDFINPTAAPSFS 310

Query: 62  NPTASMFSEKQP 27
            P+  M    +P
Sbjct: 311 MPSRPMSESNRP 322


Top