BLASTX nr result
ID: Panax21_contig00018100
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018100 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein ... 239 2e-61 ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 238 3e-61 ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 229 1e-58 ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|2... 229 1e-58 ref|XP_002326849.1| predicted protein [Populus trichocarpa] gi|2... 225 3e-57 >gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera] Length = 342 Score = 239 bits (610), Expect = 2e-61 Identities = 113/127 (88%), Positives = 124/127 (97%) Frame = -1 Query: 383 GTEEHAELVDAEEQEHHDIYKERRKRKEFEVFVGGLDKDATEDDLREVFSEVGEVTEVRL 204 G +EHAE+VDAE++EHH+++KERRKRKEFEVFVGGLDKDATEDDL++VFS+VGEVTEVRL Sbjct: 3 GLQEHAEMVDAEDEEHHEVFKERRKRKEFEVFVGGLDKDATEDDLKKVFSQVGEVTEVRL 62 Query: 203 MMNPQTKKNKGFAFLRFATVEQAKRACSNLKNPVVNGKQCGVTPSQDSDTLFLGNICKTW 24 MMNPQTKKNKGFAFLRFATVEQAKRA + LKNPVVNGKQCGVTPSQDSDTLFLGNICKTW Sbjct: 63 MMNPQTKKNKGFAFLRFATVEQAKRAVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTW 122 Query: 23 TKEALKE 3 TKEALKE Sbjct: 123 TKEALKE 129 >ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera] gi|297734640|emb|CBI16691.3| unnamed protein product [Vitis vinifera] Length = 812 Score = 238 bits (608), Expect = 3e-61 Identities = 113/125 (90%), Positives = 123/125 (98%) Frame = -1 Query: 377 EEHAELVDAEEQEHHDIYKERRKRKEFEVFVGGLDKDATEDDLREVFSEVGEVTEVRLMM 198 +EHAE+VDAE++EHH+++KERRKRKEFEVFVGGLDKDATEDDLR+VFS+VGEVTEVRLMM Sbjct: 206 QEHAEMVDAEDEEHHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMM 265 Query: 197 NPQTKKNKGFAFLRFATVEQAKRACSNLKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTK 18 NPQTKKNKGFAFLRFATVEQAKRA + LKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTK Sbjct: 266 NPQTKKNKGFAFLRFATVEQAKRAVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTK 325 Query: 17 EALKE 3 EALKE Sbjct: 326 EALKE 330 >ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis] gi|223534154|gb|EEF35870.1| RNA binding protein, putative [Ricinus communis] Length = 784 Score = 229 bits (585), Expect = 1e-58 Identities = 107/124 (86%), Positives = 121/124 (97%) Frame = -1 Query: 374 EHAELVDAEEQEHHDIYKERRKRKEFEVFVGGLDKDATEDDLREVFSEVGEVTEVRLMMN 195 +HA++V+AEE+EHH+++KERRKRKEFEVFVGGLDKDATEDDLR+VF+ VGEVTEVRLMMN Sbjct: 188 DHAQVVNAEEEEHHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMN 247 Query: 194 PQTKKNKGFAFLRFATVEQAKRACSNLKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKE 15 PQTKKNKGFAFLRF+TVEQAK+A + LKNPV+NGKQCGVTPSQDSDTLFLGNICKTWTKE Sbjct: 248 PQTKKNKGFAFLRFSTVEQAKKAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKE 307 Query: 14 ALKE 3 ALKE Sbjct: 308 ALKE 311 >ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|222844227|gb|EEE81774.1| predicted protein [Populus trichocarpa] Length = 341 Score = 229 bits (585), Expect = 1e-58 Identities = 110/125 (88%), Positives = 119/125 (95%), Gaps = 1/125 (0%) Frame = -1 Query: 374 EHAELVDAEEQ-EHHDIYKERRKRKEFEVFVGGLDKDATEDDLREVFSEVGEVTEVRLMM 198 EHAE+ D EE+ EHH+++KERRKRKEFEVFVGGLDKDATEDDLR++FS VGEVTEVRLMM Sbjct: 6 EHAEMADVEEEDEHHEVFKERRKRKEFEVFVGGLDKDATEDDLRKIFSRVGEVTEVRLMM 65 Query: 197 NPQTKKNKGFAFLRFATVEQAKRACSNLKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTK 18 NPQTKKNKGFAFLRFATVEQAKRA + LKNPV+NGKQCGVTPSQDSDTLFLGNICKTWTK Sbjct: 66 NPQTKKNKGFAFLRFATVEQAKRAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTK 125 Query: 17 EALKE 3 EALKE Sbjct: 126 EALKE 130 >ref|XP_002326849.1| predicted protein [Populus trichocarpa] gi|222835164|gb|EEE73599.1| predicted protein [Populus trichocarpa] Length = 343 Score = 225 bits (573), Expect = 3e-57 Identities = 108/125 (86%), Positives = 117/125 (93%), Gaps = 1/125 (0%) Frame = -1 Query: 374 EHAELVDAEEQ-EHHDIYKERRKRKEFEVFVGGLDKDATEDDLREVFSEVGEVTEVRLMM 198 E AE+ D EE+ EHH+++KERRKRKEFE+FVGGLDKDATEDDLR+VFS VGEVTE RLMM Sbjct: 6 ERAEMADVEEEDEHHEVFKERRKRKEFEIFVGGLDKDATEDDLRKVFSRVGEVTEARLMM 65 Query: 197 NPQTKKNKGFAFLRFATVEQAKRACSNLKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTK 18 NPQTKKNKGFAFLRFATVEQAKRA + LKNPV+NGKQCGVTPSQDSDTLFLGNICKTWTK Sbjct: 66 NPQTKKNKGFAFLRFATVEQAKRAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTK 125 Query: 17 EALKE 3 EALKE Sbjct: 126 EALKE 130