BLASTX nr result

ID: Panax21_contig00018061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018061
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278915.1| PREDICTED: E3 ubiquitin-protein ligase XBAT3...   155   2e-36
ref|NP_196344.2| E3 ubiquitin-protein ligase XBAT33 [Arabidopsis...   148   5e-34
emb|CAB87283.1| putative protein [Arabidopsis thaliana]               148   5e-34
ref|XP_002322458.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002318233.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31

>ref|XP_002278915.1| PREDICTED: E3 ubiquitin-protein ligase XBAT33 [Vitis vinifera]
           gi|297741088|emb|CBI31819.3| unnamed protein product
           [Vitis vinifera]
          Length = 512

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/84 (88%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
 Frame = -1

Query: 434 LNCNGWLPLDVARMWGRHWLEPLLAPNSELIIPVFPPSNYLSLPLMSVLNIAREFGLQSS 255
           LNCNGWLPLDVARMWGRHWLEPLLAPNS+ IIPVFPPSN LSLPLMSVLNIARE GLQSS
Sbjct: 250 LNCNGWLPLDVARMWGRHWLEPLLAPNSDSIIPVFPPSNCLSLPLMSVLNIARECGLQSS 309

Query: 254 AT-SDDTDLCVVCLERACTIAAEG 186
            T SD+TD+C VCLERACT+AAEG
Sbjct: 310 TTSSDETDICAVCLERACTVAAEG 333


>ref|NP_196344.2| E3 ubiquitin-protein ligase XBAT33 [Arabidopsis thaliana]
           gi|122239678|sp|Q4FE45.1|XB33_ARATH RecName: Full=E3
           ubiquitin-protein ligase XBAT33; AltName: Full=Ankyrin
           repeat domain and RING finger-containing protein XBAT33;
           AltName: Full=Protein XB3 homolog 3
           gi|70905089|gb|AAZ14070.1| At5g07270 [Arabidopsis
           thaliana] gi|117168057|gb|ABK32111.1| At5g07270
           [Arabidopsis thaliana] gi|332003748|gb|AED91131.1| E3
           ubiquitin-protein ligase XBAT33 [Arabidopsis thaliana]
          Length = 513

 Score =  148 bits (373), Expect = 5e-34
 Identities = 62/83 (74%), Positives = 74/83 (89%)
 Frame = -1

Query: 434 LNCNGWLPLDVARMWGRHWLEPLLAPNSELIIPVFPPSNYLSLPLMSVLNIAREFGLQSS 255
           LNCNGWLP+D+ARMW RHWLEPLL+PNS+++IP FP SNYLSLPL+S+LNIAREFGLQS+
Sbjct: 244 LNCNGWLPIDIARMWSRHWLEPLLSPNSDVVIPAFPHSNYLSLPLLSILNIAREFGLQSA 303

Query: 254 ATSDDTDLCVVCLERACTIAAEG 186
              D+ D+C VCLER CT+AAEG
Sbjct: 304 TIGDEVDICAVCLERTCTVAAEG 326


>emb|CAB87283.1| putative protein [Arabidopsis thaliana]
          Length = 519

 Score =  148 bits (373), Expect = 5e-34
 Identities = 62/83 (74%), Positives = 74/83 (89%)
 Frame = -1

Query: 434 LNCNGWLPLDVARMWGRHWLEPLLAPNSELIIPVFPPSNYLSLPLMSVLNIAREFGLQSS 255
           LNCNGWLP+D+ARMW RHWLEPLL+PNS+++IP FP SNYLSLPL+S+LNIAREFGLQS+
Sbjct: 250 LNCNGWLPIDIARMWSRHWLEPLLSPNSDVVIPAFPHSNYLSLPLLSILNIAREFGLQSA 309

Query: 254 ATSDDTDLCVVCLERACTIAAEG 186
              D+ D+C VCLER CT+AAEG
Sbjct: 310 TIGDEVDICAVCLERTCTVAAEG 332


>ref|XP_002322458.1| predicted protein [Populus trichocarpa] gi|222869454|gb|EEF06585.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/84 (77%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
 Frame = -1

Query: 434 LNCNGWLPLDVARMWGRHWLEPLLAPNSELIIPVFPPSNYLSLPLMSVLNIAREFGLQSS 255
           LNCNGWLP+DVARMWGRHWLEPLLAPNS+  IP FP SNYLSLPL+SVLNIARE G+  S
Sbjct: 250 LNCNGWLPVDVARMWGRHWLEPLLAPNSDSAIPRFPHSNYLSLPLLSVLNIARESGMHCS 309

Query: 254 -ATSDDTDLCVVCLERACTIAAEG 186
            + SDD D+C VCLERAC +AAEG
Sbjct: 310 VSASDDPDICAVCLERACNVAAEG 333


>ref|XP_002318233.1| predicted protein [Populus trichocarpa] gi|222858906|gb|EEE96453.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/84 (78%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
 Frame = -1

Query: 434 LNCNGWLPLDVARMWGRHWLEPLLAPNSELIIPVFPPSNYLSLPLMSVLNIAREFGLQ-S 258
           LNCNGWLP+DVARMWGRHWLEPLLA NSE  IP FP SNYL+LPL+SVLNIARE GLQ S
Sbjct: 250 LNCNGWLPVDVARMWGRHWLEPLLATNSESTIPRFPHSNYLALPLLSVLNIARESGLQCS 309

Query: 257 SATSDDTDLCVVCLERACTIAAEG 186
           + +SDD D+C VCLERAC +AAEG
Sbjct: 310 TRSSDDPDICAVCLERACNVAAEG 333