BLASTX nr result

ID: Panax21_contig00018056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018056
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166452.1| PREDICTED: LOW QUALITY PROTEIN: tubby-like F...   242   1e-61
ref|XP_004134184.1| PREDICTED: tubby-like F-box protein 3-like [...   242   1e-61
ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [...   242   1e-61
ref|XP_004144973.1| PREDICTED: tubby-like F-box protein 6-like [...   240   4e-61
ref|XP_003542914.1| PREDICTED: tubby-like F-box protein 6-like [...   239   6e-61

>ref|XP_004166452.1| PREDICTED: LOW QUALITY PROTEIN: tubby-like F-box protein 6-like
           [Cucumis sativus]
          Length = 386

 Score =  242 bits (617), Expect = 1e-61
 Identities = 120/182 (65%), Positives = 142/182 (78%), Gaps = 2/182 (1%)
 Frame = -2

Query: 542 MGMKLNYGGSRTRSCRGVQEGSSAAMEP--ENCCWADFPQELLREVLVRVEASERDWPLR 369
           M +K  +   R+RS   VQ+ S+ A     +  CWA+ PQELLREVL+R+EASE  WP R
Sbjct: 1   MSLKTIFQDMRSRSRCVVQDASAXAPTDALDQSCWANMPQELLREVLMRIEASETSWPFR 60

Query: 368 KGVVACAGVCRSWRLIMKEIVRLPEMSGILTFPISVKQPGPRESLIRCFIKRNRSTHKYD 189
           K VVACAGVCRSWR I KEIV+ PE+SG LTFPIS+KQPG R+ L++CFIKRNRS   Y 
Sbjct: 61  KSVVACAGVCRSWRAITKEIVKTPELSGRLTFPISIKQPGSRDPLLQCFIKRNRSNQTYY 120

Query: 188 LYLSLTQALADDGKFLLAARKCRRATGTDYIISLHTDDMSKGSSKYIGKLRSNFLGTKYI 9
           L+LSLT AL DDGKFLLAARKC+R T TDYIISLH +D+SKGSS Y+GKLRSNFLGTK+ 
Sbjct: 121 LFLSLTSALTDDGKFLLAARKCKRPTYTDYIISLHAEDLSKGSSTYVGKLRSNFLGTKFT 180

Query: 8   IY 3
           I+
Sbjct: 181 IF 182


>ref|XP_004134184.1| PREDICTED: tubby-like F-box protein 3-like [Cucumis sativus]
           gi|449495398|ref|XP_004159828.1| PREDICTED: tubby-like
           F-box protein 3-like [Cucumis sativus]
          Length = 387

 Score =  242 bits (617), Expect = 1e-61
 Identities = 125/182 (68%), Positives = 140/182 (76%), Gaps = 2/182 (1%)
 Frame = -2

Query: 542 MGMKLNYGGSRTRSCRGVQEGSSAAMEPE--NCCWADFPQELLREVLVRVEASERDWPLR 369
           M +K      R+RS R VQ+GS+  +       CWA  PQELLREVLVR+E+SE  WP R
Sbjct: 1   MSLKSIIQEMRSRSRRVVQDGSTPEVGDALAQSCWAYMPQELLREVLVRIESSENAWPPR 60

Query: 368 KGVVACAGVCRSWRLIMKEIVRLPEMSGILTFPISVKQPGPRESLIRCFIKRNRSTHKYD 189
           K VVACAGVCRSWR I KEIV+ PE+S  LTFPISVKQPGPR+ L+ CFIKRNRS   Y 
Sbjct: 61  KTVVACAGVCRSWRRITKEIVKTPEVSARLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120

Query: 188 LYLSLTQALADDGKFLLAARKCRRATGTDYIISLHTDDMSKGSSKYIGKLRSNFLGTKYI 9
           LYLSLT ALADDGKFLLAARKCRRAT TDYIISLH DDMSK S  ++GKLRSNFLGTK+ 
Sbjct: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFVGKLRSNFLGTKFT 180

Query: 8   IY 3
           I+
Sbjct: 181 IF 182


>ref|XP_002269323.1| PREDICTED: tubby-like F-box protein 3-like [Vitis vinifera]
          Length = 405

 Score =  242 bits (617), Expect = 1e-61
 Identities = 121/178 (67%), Positives = 139/178 (78%)
 Frame = -2

Query: 536 MKLNYGGSRTRSCRGVQEGSSAAMEPENCCWADFPQELLREVLVRVEASERDWPLRKGVV 357
           +K NYG  R+RS R VQ+ S         CWA+ P ELLR+VL+R+EASE  WP RK VV
Sbjct: 24  VKFNYG-LRSRSHRVVQDSSMVVDALRQSCWANMPPELLRDVLMRIEASESTWPPRKNVV 82

Query: 356 ACAGVCRSWRLIMKEIVRLPEMSGILTFPISVKQPGPRESLIRCFIKRNRSTHKYDLYLS 177
           ACAGVCRSWR I KEIV+ PE+SG LTFPIS+KQPGPR SL++C+IKRNRS   Y LYL 
Sbjct: 83  ACAGVCRSWREITKEIVKTPELSGKLTFPISLKQPGPRGSLLQCYIKRNRSNQTYHLYLG 142

Query: 176 LTQALADDGKFLLAARKCRRATGTDYIISLHTDDMSKGSSKYIGKLRSNFLGTKYIIY 3
           L QA  DDGKFLLAARKCRR T TDYIISL+ DD+SKGS+ YIGKLRSNFLGTK+ +Y
Sbjct: 143 LNQASTDDGKFLLAARKCRRPTCTDYIISLNADDVSKGSTTYIGKLRSNFLGTKFTVY 200


>ref|XP_004144973.1| PREDICTED: tubby-like F-box protein 6-like [Cucumis sativus]
           gi|449470884|ref|XP_004153139.1| PREDICTED: tubby-like
           F-box protein 6-like [Cucumis sativus]
          Length = 386

 Score =  240 bits (612), Expect = 4e-61
 Identities = 119/182 (65%), Positives = 141/182 (77%), Gaps = 2/182 (1%)
 Frame = -2

Query: 542 MGMKLNYGGSRTRSCRGVQEGSSAAMEP--ENCCWADFPQELLREVLVRVEASERDWPLR 369
           M +K  +   R+RS   VQ+ S+       +  CWA+ PQELLREVL+R+EASE  WP R
Sbjct: 1   MSLKTIFQDMRSRSRCVVQDASAPPPTDALDQSCWANMPQELLREVLMRIEASETSWPFR 60

Query: 368 KGVVACAGVCRSWRLIMKEIVRLPEMSGILTFPISVKQPGPRESLIRCFIKRNRSTHKYD 189
           K VVACAGVCRSWR I KEIV+ PE+SG LTFPIS+KQPG R+ L++CFIKRNRS   Y 
Sbjct: 61  KSVVACAGVCRSWRAITKEIVKTPELSGRLTFPISIKQPGSRDPLLQCFIKRNRSNQTYY 120

Query: 188 LYLSLTQALADDGKFLLAARKCRRATGTDYIISLHTDDMSKGSSKYIGKLRSNFLGTKYI 9
           L+LSLT AL DDGKFLLAARKC+R T TDYIISLH +D+SKGSS Y+GKLRSNFLGTK+ 
Sbjct: 121 LFLSLTSALTDDGKFLLAARKCKRPTYTDYIISLHAEDLSKGSSTYVGKLRSNFLGTKFT 180

Query: 8   IY 3
           I+
Sbjct: 181 IF 182


>ref|XP_003542914.1| PREDICTED: tubby-like F-box protein 6-like [Glycine max]
          Length = 389

 Score =  239 bits (610), Expect = 6e-61
 Identities = 121/177 (68%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -2

Query: 512 RTRSCRGVQEGSSAAM-------EPENCCWADFPQELLREVLVRVEASERDWPLRKGVVA 354
           R+RS R VQE  +A              CWA+ PQELLREVL+R+EASE  WP RK VV+
Sbjct: 8   RSRSQRVVQEQEAAECVGVVVGDSMRQSCWANMPQELLREVLLRIEASEDTWPPRKSVVS 67

Query: 353 CAGVCRSWRLIMKEIVRLPEMSGILTFPISVKQPGPRESLIRCFIKRNRSTHKYDLYLSL 174
           CAGVCRSWR I K+IV+ PE+S  +TFPISVKQPGPRE+L+RCFIKRNRST  Y L+LSL
Sbjct: 68  CAGVCRSWRHITKDIVKTPELSSKITFPISVKQPGPRENLLRCFIKRNRSTQTYYLFLSL 127

Query: 173 TQALADDGKFLLAARKCRRATGTDYIISLHTDDMSKGSSKYIGKLRSNFLGTKYIIY 3
           T  LA+DGKFLLAARKCRR T TDYIISL  DDMSKGS+ Y+GKLRSNFLGTK+ IY
Sbjct: 128 TSTLAEDGKFLLAARKCRRPTCTDYIISLDADDMSKGSNSYVGKLRSNFLGTKFTIY 184