BLASTX nr result

ID: Panax21_contig00018043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018043
         (1687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isofo...   264   5e-68
emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinife...   259   1e-66
ref|XP_002315700.1| predicted protein [Populus trichocarpa] gi|2...   247   8e-63
gb|ABK95405.1| unknown [Populus trichocarpa]                          240   7e-61
ref|XP_002520190.1| transcription factor, putative [Ricinus comm...   233   1e-58

>ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isoform 2 [Vitis vinifera]
          Length = 288

 Score =  264 bits (675), Expect = 5e-68
 Identities = 160/259 (61%), Positives = 183/259 (70%), Gaps = 13/259 (5%)
 Frame = -2

Query: 1425 MSSTSSKCRSDDGPNSGTCTEAXXXXXXXXXXXGIMLFGVRVMEASFRKSASMNNLAQYE 1246
            MS + S+C  ++G NS TCTE+            IMLFGVR+ E +FRKSASM NL+QYE
Sbjct: 1    MSRSCSQC-GNNGHNSRTCTESGGAGAAAND---IMLFGVRITEGAFRKSASMTNLSQYE 56

Query: 1245 QPQDSIPDIGAGYASDDVVHASARSRERKRGVAWTEEEHRQFLMGLQKVGKGDWRGISRN 1066
            QPQDS  D  AGYASDDVVHASARSRERKRGV WTEEEHR FL+GLQKVGKGDWRGISRN
Sbjct: 57   QPQDSNAD--AGYASDDVVHASARSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRN 114

Query: 1065 YVKTRTPTQVASHAQKYFLXXXXXXXXXXRSSLFDITSHDTFTGNTI-EDYQLHQESISQ 889
            +VKTRTPTQVASHAQKYFL          RSSLFDIT+ DTF G+TI E+ Q+HQE++S 
Sbjct: 115  FVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITA-DTFMGSTILEEDQVHQETVSP 173

Query: 888  RSKNTE------GYPMSSSTFP---GPSST---ENFALGQTKLIRPTPILPVPPSSRMAD 745
               ++       G+P+   TFP    P  T    N A G TKLIRP PILPVPPSS+MAD
Sbjct: 174  PQLHSHLNGSAGGFPV--PTFPVTMAPILTLGQSNQAKGPTKLIRPIPILPVPPSSKMAD 231

Query: 744  LNLNKSSTTEEMEAFPLSL 688
            LNLN  ST + +   PLSL
Sbjct: 232  LNLNIPSTADPL---PLSL 247


>emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinifera]
            gi|296086475|emb|CBI32064.3| unnamed protein product
            [Vitis vinifera]
          Length = 300

 Score =  259 bits (663), Expect = 1e-66
 Identities = 160/271 (59%), Positives = 183/271 (67%), Gaps = 25/271 (9%)
 Frame = -2

Query: 1425 MSSTSSKCRSDDGPNSGTCTEAXXXXXXXXXXXGIMLFGVRVMEASFRKSASMNNLAQYE 1246
            MS + S+C  ++G NS TCTE+            IMLFGVR+ E +FRKSASM NL+QYE
Sbjct: 1    MSRSCSQC-GNNGHNSRTCTESGGAGAAAND---IMLFGVRITEGAFRKSASMTNLSQYE 56

Query: 1245 QPQDSIPDIGAGYASDDVVHASARSRERKRGVAWTEEEHRQFLMGLQKVGKGDWRGISRN 1066
            QPQDS  D  AGYASDDVVHASARSRERKRGV WTEEEHR FL+GLQKVGKGDWRGISRN
Sbjct: 57   QPQDSNAD--AGYASDDVVHASARSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGISRN 114

Query: 1065 YVKTRTPTQVASHAQKYFLXXXXXXXXXXRSSLFDITSHDTFTGNTI-EDYQLHQESISQ 889
            +VKTRTPTQVASHAQKYFL          RSSLFDIT+ DTF G+TI E+ Q+HQE++S 
Sbjct: 115  FVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITA-DTFMGSTILEEDQVHQETVSP 173

Query: 888  RSKNTE------GYPMSSSTFP-----------GPSSTENFALGQ-------TKLIRPTP 781
               ++       G+P+   TFP              S E   LGQ       TKLIRP P
Sbjct: 174  PQLHSHLNGSAGGFPV--PTFPVTMAPVVLPVASNGSMEILTLGQSNQAKGPTKLIRPIP 231

Query: 780  ILPVPPSSRMADLNLNKSSTTEEMEAFPLSL 688
            ILPVPPSS+MADLNLN  ST + +   PLSL
Sbjct: 232  ILPVPPSSKMADLNLNIPSTADPL---PLSL 259


>ref|XP_002315700.1| predicted protein [Populus trichocarpa] gi|222864740|gb|EEF01871.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  247 bits (630), Expect = 8e-63
 Identities = 147/277 (53%), Positives = 181/277 (65%), Gaps = 30/277 (10%)
 Frame = -2

Query: 1425 MSSTSSKCRSDDGPNSGTCTEAXXXXXXXXXXXGIMLFGVRVME--ASFRKSASMNNLAQ 1252
            MS + S+C  ++G NS TC E+           GIMLFGVRV E  ASFRKSASM NL+Q
Sbjct: 2    MSRSCSQC-GNNGHNSRTCGESPCCGDQNVTPTGIMLFGVRVAEGAASFRKSASMINLSQ 60

Query: 1251 YEQP-QDSIPDIGAGYASDDVVHASARSRERKRGVAWTEEEHRQFLMGLQKVGKGDWRGI 1075
            YEQP ++   D+ AGY SDDVVHAS RSRERKRGV WTEEEH+ FL+GLQKVGKGDWRGI
Sbjct: 61   YEQPHEEPNADVAAGYESDDVVHASGRSRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGI 120

Query: 1074 SRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXRSSLFDITSHDTFT---GNTIEDYQLHQ 904
            SRN+VKTRTPTQVASHAQKYFL          RSSLFDIT+ DTF    G+++E+ Q+HQ
Sbjct: 121  SRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITT-DTFMISGGSSMEEDQVHQ 179

Query: 903  ESIS---------QRSKNTEGYPMS--------SSTFPGPSSTENFALGQT-------KL 796
            E+ +           +   EG PM+        +S   G +  E   LGQT       KL
Sbjct: 180  ETPALALPQPQPRLNNNRPEGLPMATFPVISPVTSPLSGDNPMEKLTLGQTNVDKMSPKL 239

Query: 795  IRPTPILPVPPSSRMADLNLNKSSTTEEMEAFPLSLN 685
             RPTPI+P+PPSS++AD+NLN+    +++ A  L L+
Sbjct: 240  FRPTPIIPIPPSSKLADINLNQKGPKDQLTALSLKLS 276


>gb|ABK95405.1| unknown [Populus trichocarpa]
          Length = 312

 Score =  240 bits (613), Expect = 7e-61
 Identities = 145/283 (51%), Positives = 177/283 (62%), Gaps = 36/283 (12%)
 Frame = -2

Query: 1425 MSSTSSKCRSDDGPNSGTCTEAXXXXXXXXXXXGIMLFGVRVME--ASFRKSASMNNLAQ 1252
            M  + S+C  ++G NS TC E+            IMLFGVRV E  ASFRKS SMNNL+Q
Sbjct: 2    MPRSCSQC-GNNGHNSRTCGESPAGGDQSSSTG-IMLFGVRVTEVAASFRKSYSMNNLSQ 59

Query: 1251 YEQPQDSIP--DIGAGYASDDVVHASARSRERKRGVAWTEEEHRQFLMGLQKVGKGDWRG 1078
            Y++     P  D+ AGY SDDVVHAS RSRERKRGV WTEEEH+ FL+GLQK+GKGDWRG
Sbjct: 60   YDEQPHEEPNADVAAGYESDDVVHASGRSRERKRGVPWTEEEHKLFLLGLQKIGKGDWRG 119

Query: 1077 ISRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXRSSLFDITSHDTFTGNTIEDYQLHQES 898
            ISRN+VKTRTPTQVASHAQKYFL          RSSLFDIT+ DTF G+++E+ Q+HQE+
Sbjct: 120  ISRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITT-DTFMGSSMEEDQVHQET 178

Query: 897  ISQ-------------RSKNTEGYPMSSSTFP------------GPSSTENFALGQT--- 802
             +               +    G+PM  STFP            G +  E    GQT   
Sbjct: 179  ATPALPQLQLQPRPCLNNNRPGGFPM--STFPVTAISPVTSPVSGDNPLEKLTSGQTNVN 236

Query: 801  ----KLIRPTPILPVPPSSRMADLNLNKSSTTEEMEAFPLSLN 685
                KL+RP PI+P+PPSS+MADLNLN+ S  ++  A  L L+
Sbjct: 237  KKSSKLVRPVPIVPIPPSSKMADLNLNQKSPEDQFPALSLKLS 279


>ref|XP_002520190.1| transcription factor, putative [Ricinus communis]
            gi|223540682|gb|EEF42245.1| transcription factor,
            putative [Ricinus communis]
          Length = 331

 Score =  233 bits (594), Expect = 1e-58
 Identities = 154/295 (52%), Positives = 181/295 (61%), Gaps = 47/295 (15%)
 Frame = -2

Query: 1425 MSSTSSKCRSDDGPNSGTCTEAXXXXXXXXXXXGIMLFGVRVME--ASFRKSASMNNLAQ 1252
            MS + S+C  ++G NS TC E            GIMLFGVRVM   ASFRKS SMNNL+Q
Sbjct: 1    MSRSCSQC-GNNGHNSRTCGE--NSGGSAAGESGIMLFGVRVMMEGASFRKSVSMNNLSQ 57

Query: 1251 YEQPQDSIPDIGA-GYASDDVVHASARSRERKRGVAWTEEEHRQFLMGLQKVGKGDWRGI 1075
            Y+QPQD   D+ A GY SDDVVHAS RSRERKRGV WTEEEHR FL+GLQKVGKGDWRGI
Sbjct: 58   YDQPQDPNADVAAAGYESDDVVHASGRSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGI 117

Query: 1074 SRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXRSSLFDITSHDTFTGNTIEDYQ--LHQE 901
            SRN+VKTRTPTQVASHAQKYFL          RSSLFDIT+ DTF G+TIE+ Q  +HQE
Sbjct: 118  SRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITT-DTFLGSTIEEEQVVMHQE 176

Query: 900  S-----------ISQRSKNTEGYPMSS---STFPG--------PSSTENFALG------- 808
            +           +S  +    G+P S+   S  P          +S E+ +LG       
Sbjct: 177  TATALPLPPQPHLSNNNLGVGGFPKSTFAVSLSPAVLPVKGDINNSMESLSLGPMISIIS 236

Query: 807  -------------QTKLIRPTPILPVPPSSRMADLNLNKSSTTEEMEAFPLSLNL 682
                           KLIRP PI+PV  SSR+ +LNL+++S T E E  PLSL L
Sbjct: 237  SSSKAKTLSNPLPPPKLIRPIPIIPVAASSRIGELNLDQNSPTTE-ETLPLSLKL 290


Top