BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018024
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-20
gb|ACU21279.1| unknown [Glycine max]                                   65   1e-18
ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-18
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-17
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...    60   1e-14

>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Glycine max]
          Length = 577

 Score = 66.6 bits (161), Expect(3) = 3e-20
 Identities = 26/44 (59%), Positives = 40/44 (90%)
 Frame = +1

Query: 262 KGYNPDIITYTQLIKGYCLRGKIQDAEKLFDKI*RSGLVIDHVP 393
           +GY PD+ITYT+L++G+C+RGK+++AE+L+ KI +SGL+ DHVP
Sbjct: 501 RGYEPDLITYTELVRGFCIRGKMKEAEELYAKILKSGLLNDHVP 544



 Score = 53.1 bits (126), Expect(3) = 3e-20
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +2

Query: 77  KCFFPDVVTYNLLIGAACNXXXXXXXXXXXDEMLRKGYNP 196
           KC FPDVVTYNLLIGAACN           D+M+++GY P
Sbjct: 466 KCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEP 505



 Score = 23.1 bits (48), Expect(3) = 3e-20
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +3

Query: 3   NALIYALTKDGKLVEANFLKTEMVLNVFF 89
           NALI A  K G    A  LK EM+    F
Sbjct: 441 NALILAQVKSGNFHGACSLKEEMISKCLF 469


>gb|ACU21279.1| unknown [Glycine max]
          Length = 112

 Score = 65.5 bits (158), Expect(2) = 1e-18
 Identities = 26/44 (59%), Positives = 39/44 (88%)
 Frame = +1

Query: 262 KGYNPDIITYTQLIKGYCLRGKIQDAEKLFDKI*RSGLVIDHVP 393
           +GY PD+ITYT+L++G+C RGK+++AE+L+ KI +SGL+ DHVP
Sbjct: 39  RGYEPDLITYTELVRGFCTRGKMKEAEELYAKILKSGLLNDHVP 82



 Score = 52.4 bits (124), Expect(2) = 1e-18
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +2

Query: 77  KCFFPDVVTYNLLIGAACNXXXXXXXXXXXDEMLRKGYNP 196
           KC FPDVVTYNLLIGAACN           +EM+++GY P
Sbjct: 4   KCLFPDVVTYNLLIGAACNIGRPDFALQLHNEMVQRGYEP 43


>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score = 65.1 bits (157), Expect(2) = 4e-18
 Identities = 27/44 (61%), Positives = 36/44 (81%)
 Frame = +1

Query: 262 KGYNPDIITYTQLIKGYCLRGKIQDAEKLFDKI*RSGLVIDHVP 393
           +GY PDIITYT+LI+G+C+RG + +AE+L  K+ RSGL IDH P
Sbjct: 513 RGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAP 556



 Score = 50.8 bits (120), Expect(2) = 4e-18
 Identities = 24/41 (58%), Positives = 26/41 (63%)
 Frame = +2

Query: 74  LKCFFPDVVTYNLLIGAACNXXXXXXXXXXXDEMLRKGYNP 196
           L   +PDVVTYNLLIGAACN           DEMLR+GY P
Sbjct: 477 LNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEP 517


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 59.3 bits (142), Expect(3) = 2e-17
 Identities = 25/43 (58%), Positives = 36/43 (83%)
 Frame = +1

Query: 265 GYNPDIITYTQLIKGYCLRGKIQDAEKLFDKI*RSGLVIDHVP 393
           G NPD+ITYT+LI+GYC++   ++AE+L  K+ +SGL+IDHVP
Sbjct: 433 GCNPDMITYTELIRGYCVKYNTKEAEELLAKLLKSGLLIDHVP 475



 Score = 45.8 bits (107), Expect(3) = 2e-17
 Identities = 24/41 (58%), Positives = 25/41 (60%)
 Frame = +2

Query: 74  LKCFFPDVVTYNLLIGAACNXXXXXXXXXXXDEMLRKGYNP 196
           LK  FPDVVTYNLLIGAA +           DEMLR G NP
Sbjct: 396 LKGLFPDVVTYNLLIGAAAHAGHIHYALQLYDEMLRGGCNP 436



 Score = 28.5 bits (62), Expect(3) = 2e-17
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 3   NALIYALTKDGKLVEANFLKTEMVLNVFF 89
           NALI+A  K G ++ A FLK +M+L   F
Sbjct: 372 NALIHAQVKIGNILYAYFLKKDMLLKGLF 400


>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score = 60.5 bits (145), Expect(2) = 1e-14
 Identities = 24/43 (55%), Positives = 36/43 (83%)
 Frame = +1

Query: 265 GYNPDIITYTQLIKGYCLRGKIQDAEKLFDKI*RSGLVIDHVP 393
           G+ PDIITYT+LI+G C+RG +++A++LF K+  +GL +DHVP
Sbjct: 507 GHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLTVDHVP 549



 Score = 43.5 bits (101), Expect(2) = 1e-14
 Identities = 20/37 (54%), Positives = 22/37 (59%)
 Frame = +2

Query: 86  FPDVVTYNLLIGAACNXXXXXXXXXXXDEMLRKGYNP 196
           FPDV+TYNLLIG ACN            EMLR G+ P
Sbjct: 474 FPDVITYNLLIGTACNAGRISIAVQLYYEMLRSGHEP 510