BLASTX nr result
ID: Panax21_contig00018020
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00018020 (995 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527184.1| conserved hypothetical protein [Ricinus comm... 91 3e-19 gb|ABK95736.1| unknown [Populus trichocarpa] 89 6e-19 ref|XP_002324643.1| actin related protein [Populus trichocarpa] ... 89 6e-19 ref|XP_002285295.1| PREDICTED: actin-related protein 6 isoform 1... 88 1e-18 ref|XP_003633077.1| PREDICTED: actin-related protein 6 isoform 2... 88 1e-18 >ref|XP_002527184.1| conserved hypothetical protein [Ricinus communis] gi|223533449|gb|EEF35197.1| conserved hypothetical protein [Ricinus communis] Length = 449 Score = 91.3 bits (225), Expect(2) = 3e-19 Identities = 41/50 (82%), Positives = 46/50 (92%) Frame = +2 Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382 +K+ +L P LGVWRGGSLLASSPDFEAMCVTK++YEELGSARCRRRFFH Sbjct: 400 VKITTLEDPLLGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRRRFFH 449 Score = 30.8 bits (68), Expect(2) = 3e-19 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 118 ELRPLVPDNYQVKI 159 ELRPLVPD+YQVKI Sbjct: 389 ELRPLVPDDYQVKI 402 >gb|ABK95736.1| unknown [Populus trichocarpa] Length = 424 Score = 88.6 bits (218), Expect(2) = 6e-19 Identities = 40/50 (80%), Positives = 44/50 (88%) Frame = +2 Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382 +K+ + P LGVWRGGSLLASSPDFEAMCVTK +YEELGSARCRRRFFH Sbjct: 375 VKITTQEDPILGVWRGGSLLASSPDFEAMCVTKAEYEELGSARCRRRFFH 424 Score = 32.3 bits (72), Expect(2) = 6e-19 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +1 Query: 112 ERELRPLVPDNYQVKI 159 E ELRPLVPD+YQVKI Sbjct: 362 EMELRPLVPDDYQVKI 377 >ref|XP_002324643.1| actin related protein [Populus trichocarpa] gi|222866077|gb|EEF03208.1| actin related protein [Populus trichocarpa] Length = 375 Score = 88.6 bits (218), Expect(2) = 6e-19 Identities = 40/50 (80%), Positives = 44/50 (88%) Frame = +2 Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382 +K+ + P LGVWRGGSLLASSPDFEAMCVTK +YEELGSARCRRRFFH Sbjct: 326 VKITTQEDPILGVWRGGSLLASSPDFEAMCVTKAEYEELGSARCRRRFFH 375 Score = 32.3 bits (72), Expect(2) = 6e-19 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +1 Query: 112 ERELRPLVPDNYQVKI 159 E ELRPLVPD+YQVKI Sbjct: 313 EMELRPLVPDDYQVKI 328 >ref|XP_002285295.1| PREDICTED: actin-related protein 6 isoform 1 [Vitis vinifera] gi|297738970|emb|CBI28215.3| unnamed protein product [Vitis vinifera] Length = 433 Score = 87.8 bits (216), Expect(2) = 1e-18 Identities = 39/50 (78%), Positives = 45/50 (90%) Frame = +2 Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382 +K+ + P LGVWRGGSLLASSPDFEAMCVTK++YEELGSARCR+RFFH Sbjct: 384 VKITTQEDPILGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRKRFFH 433 Score = 32.3 bits (72), Expect(2) = 1e-18 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +1 Query: 112 ERELRPLVPDNYQVKI 159 E ELRPLVPD+YQVKI Sbjct: 371 EMELRPLVPDDYQVKI 386 >ref|XP_003633077.1| PREDICTED: actin-related protein 6 isoform 2 [Vitis vinifera] Length = 385 Score = 87.8 bits (216), Expect(2) = 1e-18 Identities = 39/50 (78%), Positives = 45/50 (90%) Frame = +2 Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382 +K+ + P LGVWRGGSLLASSPDFEAMCVTK++YEELGSARCR+RFFH Sbjct: 336 VKITTQEDPILGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRKRFFH 385 Score = 32.3 bits (72), Expect(2) = 1e-18 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +1 Query: 112 ERELRPLVPDNYQVKI 159 E ELRPLVPD+YQVKI Sbjct: 323 EMELRPLVPDDYQVKI 338