BLASTX nr result

ID: Panax21_contig00018020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018020
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527184.1| conserved hypothetical protein [Ricinus comm...    91   3e-19
gb|ABK95736.1| unknown [Populus trichocarpa]                           89   6e-19
ref|XP_002324643.1| actin related protein [Populus trichocarpa] ...    89   6e-19
ref|XP_002285295.1| PREDICTED: actin-related protein 6 isoform 1...    88   1e-18
ref|XP_003633077.1| PREDICTED: actin-related protein 6 isoform 2...    88   1e-18

>ref|XP_002527184.1| conserved hypothetical protein [Ricinus communis]
           gi|223533449|gb|EEF35197.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 449

 Score = 91.3 bits (225), Expect(2) = 3e-19
 Identities = 41/50 (82%), Positives = 46/50 (92%)
 Frame = +2

Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382
           +K+ +L  P LGVWRGGSLLASSPDFEAMCVTK++YEELGSARCRRRFFH
Sbjct: 400 VKITTLEDPLLGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRRRFFH 449



 Score = 30.8 bits (68), Expect(2) = 3e-19
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +1

Query: 118 ELRPLVPDNYQVKI 159
           ELRPLVPD+YQVKI
Sbjct: 389 ELRPLVPDDYQVKI 402


>gb|ABK95736.1| unknown [Populus trichocarpa]
          Length = 424

 Score = 88.6 bits (218), Expect(2) = 6e-19
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = +2

Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382
           +K+ +   P LGVWRGGSLLASSPDFEAMCVTK +YEELGSARCRRRFFH
Sbjct: 375 VKITTQEDPILGVWRGGSLLASSPDFEAMCVTKAEYEELGSARCRRRFFH 424



 Score = 32.3 bits (72), Expect(2) = 6e-19
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 112 ERELRPLVPDNYQVKI 159
           E ELRPLVPD+YQVKI
Sbjct: 362 EMELRPLVPDDYQVKI 377


>ref|XP_002324643.1| actin related protein [Populus trichocarpa]
           gi|222866077|gb|EEF03208.1| actin related protein
           [Populus trichocarpa]
          Length = 375

 Score = 88.6 bits (218), Expect(2) = 6e-19
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = +2

Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382
           +K+ +   P LGVWRGGSLLASSPDFEAMCVTK +YEELGSARCRRRFFH
Sbjct: 326 VKITTQEDPILGVWRGGSLLASSPDFEAMCVTKAEYEELGSARCRRRFFH 375



 Score = 32.3 bits (72), Expect(2) = 6e-19
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 112 ERELRPLVPDNYQVKI 159
           E ELRPLVPD+YQVKI
Sbjct: 313 EMELRPLVPDDYQVKI 328


>ref|XP_002285295.1| PREDICTED: actin-related protein 6 isoform 1 [Vitis vinifera]
           gi|297738970|emb|CBI28215.3| unnamed protein product
           [Vitis vinifera]
          Length = 433

 Score = 87.8 bits (216), Expect(2) = 1e-18
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = +2

Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382
           +K+ +   P LGVWRGGSLLASSPDFEAMCVTK++YEELGSARCR+RFFH
Sbjct: 384 VKITTQEDPILGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRKRFFH 433



 Score = 32.3 bits (72), Expect(2) = 1e-18
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 112 ERELRPLVPDNYQVKI 159
           E ELRPLVPD+YQVKI
Sbjct: 371 EMELRPLVPDDYQVKI 386


>ref|XP_003633077.1| PREDICTED: actin-related protein 6 isoform 2 [Vitis vinifera]
          Length = 385

 Score = 87.8 bits (216), Expect(2) = 1e-18
 Identities = 39/50 (78%), Positives = 45/50 (90%)
 Frame = +2

Query: 233 IKLCSLCSPTLGVWRGGSLLASSPDFEAMCVTKTDYEELGSARCRRRFFH 382
           +K+ +   P LGVWRGGSLLASSPDFEAMCVTK++YEELGSARCR+RFFH
Sbjct: 336 VKITTQEDPILGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRKRFFH 385



 Score = 32.3 bits (72), Expect(2) = 1e-18
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +1

Query: 112 ERELRPLVPDNYQVKI 159
           E ELRPLVPD+YQVKI
Sbjct: 323 EMELRPLVPDDYQVKI 338


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