BLASTX nr result

ID: Panax21_contig00018007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00018007
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF74982.1|AF082892_1 cystathionine gamma-synthase isoform 2 ...   334   1e-89
ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycope...   327   1e-87
gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 ...   326   4e-87
ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chl...   311   8e-83
ref|XP_002323872.1| predicted protein [Populus trichocarpa] gi|2...   309   5e-82

>gb|AAF74982.1|AF082892_1 cystathionine gamma-synthase isoform 2 [Solanum tuberosum]
          Length = 540

 Score =  334 bits (857), Expect = 1e-89
 Identities = 182/281 (64%), Positives = 211/281 (75%), Gaps = 11/281 (3%)
 Frame = -2

Query: 811 SCARVFPAFDCRSDPEYSSNY-RSEHSNYA-RFTTGKSQLRKPTSASFGGGLSSLILKFP 638
           S AR FP+F CRSDP++S    R +  N   RF+     L + +S     G+SSLIL+FP
Sbjct: 5   SSARAFPSFQCRSDPDFSGGVPRHDLPNAGVRFSVKVKSLSRGSSVH---GMSSLILRFP 61

Query: 637 PNFVRQLSIKSRRNCSNIGVAQVVAASWSTNXXXXXXXXXXXXVDF---------TPTEE 485
           PNFVRQLS+K+RRNCSNIG+AQVVAASWS N            VD          T  EE
Sbjct: 62  PNFVRQLSVKARRNCSNIGLAQVVAASWSNNHASPDFTPAAKAVDAASIAPFDITTGDEE 121

Query: 484 PTVINGDGSSNMNDVQIPTLTNTNVASFCTSDGSVAIHAGERLGRGIVTDAITTPVVNTS 305
             V+     ++ N VQI  LT+   +SF +SDGS+AIHAGERLGRGIVTDAITTPVVNTS
Sbjct: 122 GAVVEDSPRADRN-VQIEDLTDVKYSSFLSSDGSIAIHAGERLGRGIVTDAITTPVVNTS 180

Query: 304 AYFFKKTSELIDFKEGRHSSFEYGRYGNPTTVVAEEKISALEGAESTLFMASGMCASTIL 125
           AYFFKKTS+LIDFKE + +SFEYGRYGNPT++VAEEKISALEGA++TL MASGMCAST+L
Sbjct: 181 AYFFKKTSDLIDFKEKKRASFEYGRYGNPTSIVAEEKISALEGADATLLMASGMCASTVL 240

Query: 124 LMALVPAGGHMVTTTDCYRKTRIFIETILPKMGIKTTVIDP 2
           L+ALVPAGGH+VTTTDCYRKTRIFIETILPKMGI  TVIDP
Sbjct: 241 LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP 281


>ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycopersicum]
           gi|40806079|gb|AAR92031.1| cystathionine gamma synthase
           [Solanum lycopersicum]
          Length = 540

 Score =  327 bits (839), Expect = 1e-87
 Identities = 183/282 (64%), Positives = 204/282 (72%), Gaps = 12/282 (4%)
 Frame = -2

Query: 811 SCARVFPAFDCRSDPEYSSNYRSEHSNYARFTTGKSQLRKPTSASFGGGLSSLILKFPPN 632
           S AR FP+F+CRS+P++S +     +   RF+ GK       S  +G  LSSLI +FPPN
Sbjct: 5   SYARAFPSFECRSEPDFSGSLPHPKAG-VRFS-GKYNSGSNRSQVYG--LSSLIYRFPPN 60

Query: 631 FVRQLSIKSRRNCSNIGVAQVVAASWSTNXXXXXXXXXXXXVDF------------TPTE 488
           FVRQLSIK+RRNCSNIGVAQVVAASWS N            VD             T  E
Sbjct: 61  FVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITTGDE 120

Query: 487 EPTVINGDGSSNMNDVQIPTLTNTNVASFCTSDGSVAIHAGERLGRGIVTDAITTPVVNT 308
           E  V+     S+ N VQI   T    ASF  SDGSVAIHAGERLGRGIVTDAITTPVVNT
Sbjct: 121 EVAVVENADCSDQN-VQIKGSTGVKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNT 179

Query: 307 SAYFFKKTSELIDFKEGRHSSFEYGRYGNPTTVVAEEKISALEGAESTLFMASGMCASTI 128
           SAYFF KTS+LIDFKE R +SFEYGRYGNPTTVV EEKISALEGAESTL +ASGMCAST+
Sbjct: 180 SAYFFNKTSDLIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLIVASGMCASTV 239

Query: 127 LLMALVPAGGHMVTTTDCYRKTRIFIETILPKMGIKTTVIDP 2
           + +ALVPAGGH+VTTTDCYRKTR+FIETILPKMGI  TVIDP
Sbjct: 240 MFLALVPAGGHIVTTTDCYRKTRVFIETILPKMGITATVIDP 281


>gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 [Solanum tuberosum]
          Length = 539

 Score =  326 bits (835), Expect = 4e-87
 Identities = 181/281 (64%), Positives = 204/281 (72%), Gaps = 11/281 (3%)
 Frame = -2

Query: 811 SCARVFPAFDCRSDPEYSSNYRSEHSNYARFTTGKSQLRKPTSASFGGGLSSLILKFPPN 632
           S AR FP+F+CRS+P++S +     +   RF+ GK       S  +G  LSSLI +FPPN
Sbjct: 5   SYARAFPSFECRSEPDFSGSLPHPKAG-VRFS-GKYNSGSNRSQVYG--LSSLIFRFPPN 60

Query: 631 FVRQLSIKSRRNCSNIGVAQVVAASWSTNXXXXXXXXXXXXVD-----------FTPTEE 485
           FVRQLSIK+RRNCSNIGVAQVVAASWS N            VD            T  +E
Sbjct: 61  FVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITAGDE 120

Query: 484 PTVINGDGSSNMNDVQIPTLTNTNVASFCTSDGSVAIHAGERLGRGIVTDAITTPVVNTS 305
              +  +   N  +VQI T T    ASF  SDGSVAIHAGERLGRGIVTDAITTPVVNTS
Sbjct: 121 EVAVVENADCNDQNVQI-TGTGVKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTS 179

Query: 304 AYFFKKTSELIDFKEGRHSSFEYGRYGNPTTVVAEEKISALEGAESTLFMASGMCASTIL 125
           AYFF KTS+LIDFKE R +SFEYGRYGNPTTVV EEKISALEGAESTL +ASGMCAST++
Sbjct: 180 AYFFNKTSDLIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLIVASGMCASTVM 239

Query: 124 LMALVPAGGHMVTTTDCYRKTRIFIETILPKMGIKTTVIDP 2
            +ALVPAGGH+VTTTDCYRKTR+FIETILPKMGI  TVIDP
Sbjct: 240 FLALVPAGGHIVTTTDCYRKTRVFIETILPKMGITATVIDP 280


>ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chloroplastic-like [Vitis
           vinifera]
          Length = 531

 Score =  311 bits (798), Expect = 8e-83
 Identities = 173/275 (62%), Positives = 202/275 (73%), Gaps = 5/275 (1%)
 Frame = -2

Query: 811 SCARVFPAFDCRSDPEYSSN-YRSE-HSNYARFTTGKSQLRKPTSASFGGG-LSSLILKF 641
           SC RV  AF+CRS+P++    +R E  ++  RF+   S +  P+   FG   LSSLI +F
Sbjct: 5   SCPRVSAAFECRSEPDFCGGPHRPEAFASGGRFSGKASSV--PSHQIFGASALSSLIFRF 62

Query: 640 PPNFVRQLSIKSRRNCSNIGVAQVVAASWSTNXXXXXXXXXXXXV--DFTPTEEPTVING 467
           PPNFVRQLS K+RRNCSNIGVAQVVAASWS +                   + E +V+  
Sbjct: 63  PPNFVRQLSTKARRNCSNIGVAQVVAASWSADSAAAAAASASAAAAASVEASVEVSVVES 122

Query: 466 DGSSNMNDVQIPTLTNTNVASFCTSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFKK 287
            GS    DVQ   L +   ASF   DG++ IHAGERLGRGIVTDAITTPVVNTSAYFFKK
Sbjct: 123 SGS----DVQYEDLADEK-ASFLGFDGTLTIHAGERLGRGIVTDAITTPVVNTSAYFFKK 177

Query: 286 TSELIDFKEGRHSSFEYGRYGNPTTVVAEEKISALEGAESTLFMASGMCASTILLMALVP 107
           T+ELIDFKE R +SFEYGRYGNPTTVV EEKISALEGAEST+ MASGMCAST++L+ALVP
Sbjct: 178 TAELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTVIMASGMCASTVMLLALVP 237

Query: 106 AGGHMVTTTDCYRKTRIFIETILPKMGIKTTVIDP 2
            GGHMVTTTDCYR+TRIFIET LPK+G++ TVIDP
Sbjct: 238 PGGHMVTTTDCYRRTRIFIETFLPKLGVEVTVIDP 272


>ref|XP_002323872.1| predicted protein [Populus trichocarpa] gi|222866874|gb|EEF04005.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score =  309 bits (791), Expect = 5e-82
 Identities = 171/278 (61%), Positives = 198/278 (71%), Gaps = 9/278 (3%)
 Frame = -2

Query: 808 CARVFPA--FDCRSDPEYSSNYRSE-HSNYARFTTGKSQLRKPTSASFGGGLSSLILKFP 638
           C ++F A  F+CRSD   S++  S+  SN AR  T        T    G G+SSLILKFP
Sbjct: 8   CPKLFVASSFECRSDSSSSADQPSQGRSNSARHGT--------TPFLSGAGMSSLILKFP 59

Query: 637 PNFVRQLSIKSRRNCSNIGVAQVVAASWSTNXXXXXXXXXXXXV-----DFTPTEEPT-V 476
           PNFVRQLS K+RRNCSNIGVAQ+VAASWS N                     P  EP   
Sbjct: 60  PNFVRQLSTKARRNCSNIGVAQIVAASWSNNSAAGAPSAAAAAAAAAAASAIPAAEPAKT 119

Query: 475 INGDGSSNMNDVQIPTLTNTNVASFCTSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYF 296
           + G+   +++       ++    SF +SDGS+A+HAGERLGRGIVTDAITTPVVNTSAYF
Sbjct: 120 LAGNELEDLS-------SDLEYKSFLSSDGSIAVHAGERLGRGIVTDAITTPVVNTSAYF 172

Query: 295 FKKTSELIDFKEGRHSSFEYGRYGNPTTVVAEEKISALEGAESTLFMASGMCASTILLMA 116
           FKKT ELIDFKE RH+S+EYGRYGNPTT V E+KIS LEGAESTL +ASGMCAST+LL+A
Sbjct: 173 FKKTQELIDFKEKRHASYEYGRYGNPTTQVLEDKISELEGAESTLILASGMCASTVLLLA 232

Query: 115 LVPAGGHMVTTTDCYRKTRIFIETILPKMGIKTTVIDP 2
           LVPAGGH+VTTTDCYRKTRIF+ET LPKMGI  TVIDP
Sbjct: 233 LVPAGGHLVTTTDCYRKTRIFMETFLPKMGITVTVIDP 270


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