BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017997
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|2...   471   e-130
ref|XP_002303013.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]     467   e-129
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   466   e-129
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th...   464   e-128

>ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|222861200|gb|EEE98742.1|
            predicted protein [Populus trichocarpa]
          Length = 817

 Score =  471 bits (1213), Expect = e-130
 Identities = 250/361 (69%), Positives = 283/361 (78%)
 Frame = -3

Query: 1084 SISGAATITTKLPPRPGSKSQSQIQREKITEPDGDPISVLNERIRRDLGGKREISNSNRS 905
            S++ A    T +P      S++   + KI E + DPIS+LNERIRR   GKRE S     
Sbjct: 39   SLTNAVRTQTAVP----FSSRTATPKYKI-ETEQDPISILNERIRRQHHGKREGSRP--- 90

Query: 904  KVLDSVEAEKYIQMVXXXXXXXXXXXKSNRDPSADNSNGAAFSYKVDPYALRTGDYVVHK 725
             ++DS EA++YIQMV           K +R        G  FSYKVDPY LR+GDYVVHK
Sbjct: 91   -IMDSEEADQYIQMVKEQQQRGLQKLKGDRVAK----EGDVFSYKVDPYTLRSGDYVVHK 145

Query: 724  KVGIGRFVGIKFDVQSKTDSKTATPMEYVFIEYADGMAKLPVHQASRFLYRYNLPNETKR 545
            KVGIGRF GIKFDV   +       +EYVFIEYADGMAKLPV QASR LYRYNLPNETKR
Sbjct: 146  KVGIGRFFGIKFDVPKGSSEA----IEYVFIEYADGMAKLPVMQASRMLYRYNLPNETKR 201

Query: 544  PRTLSKLSDTSAWEKRRTKGKVAVQKMVVDLMELYLHRLKQRRPPYPRTPAMSEFASHFP 365
            PRTLSKLSDT AWE+R+TKGKVA+QKMVVDLMELYLHRLKQRRPPYP+TP M+EFA+ FP
Sbjct: 202  PRTLSKLSDTGAWERRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKTPFMAEFAAQFP 261

Query: 364  YEPTPDQKQAIIDVGKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMILAP 185
            YEPTPDQK A IDV +DL +RETPMDRLICGDVGFGKTEVALRAIFC+VSAGKQAM+LAP
Sbjct: 262  YEPTPDQKLAFIDVERDLNQRETPMDRLICGDVGFGKTEVALRAIFCIVSAGKQAMVLAP 321

Query: 184  TIVLAKQHFDVISKRFSKYQDVKVGLLSRFQTKSVKEEYLDMIKHGHLNIIVGTHSLLGN 5
            TIVLAKQHFDVIS+RFSKY  +KV LLSRFQ+K+ KE YL+MI+HGHL+IIVGTHSLLGN
Sbjct: 322  TIVLAKQHFDVISERFSKYSHIKVALLSRFQSKAEKEMYLNMIEHGHLDIIVGTHSLLGN 381

Query: 4    R 2
            R
Sbjct: 382  R 382


>ref|XP_002303013.1| predicted protein [Populus trichocarpa] gi|222844739|gb|EEE82286.1|
            predicted protein [Populus trichocarpa]
          Length = 939

 Score =  469 bits (1207), Expect = e-130
 Identities = 254/367 (69%), Positives = 289/367 (78%), Gaps = 6/367 (1%)
 Frame = -3

Query: 1084 SISGAATITTKLPPRPGSKSQSQIQREKITEPDGDPISVLNERIRRDLGGKREISNSNRS 905
            S++ AA   T LP      S++   + KI E + DPIS+LNERIRR   GKRE SNS   
Sbjct: 39   SLTNAAHTQTALP----FSSRTTTPKYKI-ESEQDPISILNERIRRQHHGKREGSNSK-- 91

Query: 904  KVLDSVEAEKYIQMVXXXXXXXXXXXKSNRDPSADNSNGAAFSYKVDPYALRTGDYVVHK 725
             ++DS EA++YIQMV           K +R        G  FSYKVDPY L +GDYVVHK
Sbjct: 92   PIMDSEEADQYIQMVKEQQQRGLQKLKGDRVAK----EGDVFSYKVDPYTLSSGDYVVHK 147

Query: 724  KVGIGRFVGIKFDVQSKTDSKTATPMEYVFIEYADGMAKLPVHQASRFLYRYNLPNETKR 545
            KVGIGRFVGIKFD+ SK  S+    +EYVFIEYADGMAKLPV QASR LYRYNLPN+TK+
Sbjct: 148  KVGIGRFVGIKFDM-SKGSSEA---IEYVFIEYADGMAKLPVKQASRMLYRYNLPNDTKK 203

Query: 544  PRTLSKLSDTSAWEKRRTKGKVAVQKMVVDLMELYLHRLKQRRPPYPRTPAMSEFASHFP 365
            PRTLSKLSD  AWE+R+TKGKVA+QKMVVDLMELYLHRLKQRRPPYP+TPAM +F++ FP
Sbjct: 204  PRTLSKLSDNGAWERRKTKGKVAIQKMVVDLMELYLHRLKQRRPPYPKTPAMVDFSAQFP 263

Query: 364  YEPTPDQKQAIIDVGKDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMILAP 185
            YEPTPDQKQA IDV +DLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM+LAP
Sbjct: 264  YEPTPDQKQAFIDVMRDLTERETPMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAP 323

Query: 184  TIVLAKQHFDVISKRFSKYQDVKVGLLSRF------QTKSVKEEYLDMIKHGHLNIIVGT 23
            TIVLA+QHFDVIS+RFSKY  +KV LLSRF      Q+K+ KE YL+M KHGHL+IIVGT
Sbjct: 324  TIVLARQHFDVISERFSKYPHIKVALLSRFQAYLLLQSKAEKEMYLEMTKHGHLDIIVGT 383

Query: 22   HSLLGNR 2
            HSLLG+R
Sbjct: 384  HSLLGSR 390


>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
          Length = 823

 Score =  467 bits (1202), Expect = e-129
 Identities = 243/336 (72%), Positives = 273/336 (81%)
 Frame = -3

Query: 1009 REKITEPDGDPISVLNERIRRDLGGKREISNSNRSKVLDSVEAEKYIQMVXXXXXXXXXX 830
            REK    + D IS+LNERIRRDLG KRE S       +DS EA+KYIQMV          
Sbjct: 63   REKQEFAENDSISLLNERIRRDLG-KRETSRP----AMDSEEADKYIQMVKEQQERGLQK 117

Query: 829  XKSNRDPSADNSNGAAFSYKVDPYALRTGDYVVHKKVGIGRFVGIKFDVQSKTDSKTATP 650
             K  R    +  +G  FSYKVDPY+L +GDYVVHKKVGIGRFVGIKFDV   +      P
Sbjct: 118  LKGVRQ-GTETGSGGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSE----P 172

Query: 649  MEYVFIEYADGMAKLPVHQASRFLYRYNLPNETKRPRTLSKLSDTSAWEKRRTKGKVAVQ 470
            +EYVFIEYADGMAKLP+ QASR LYRYNLPNETKRPRTLS+LSDTS WE+R+TKGKVA+Q
Sbjct: 173  LEYVFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQ 232

Query: 469  KMVVDLMELYLHRLKQRRPPYPRTPAMSEFASHFPYEPTPDQKQAIIDVGKDLTERETPM 290
            KMVVDLMELYLHRL+Q+R PYP+ P M++FA+ FPY  TPDQKQA +DV KDLTERETPM
Sbjct: 233  KMVVDLMELYLHRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVDKDLTERETPM 292

Query: 289  DRLICGDVGFGKTEVALRAIFCVVSAGKQAMILAPTIVLAKQHFDVISKRFSKYQDVKVG 110
            DRLICGDVGFGKTEVALRAIFCVVSAGKQAM+LAPTIVLAKQH+DVIS+RFS Y  +KVG
Sbjct: 293  DRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHYDVISERFSLYPQIKVG 352

Query: 109  LLSRFQTKSVKEEYLDMIKHGHLNIIVGTHSLLGNR 2
            LLSRFQTK+ KEEYL+MIK+G LNIIVGTHSLLG+R
Sbjct: 353  LLSRFQTKAEKEEYLEMIKNGDLNIIVGTHSLLGSR 388


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis vinifera]
          Length = 823

 Score =  466 bits (1199), Expect = e-129
 Identities = 242/338 (71%), Positives = 278/338 (82%)
 Frame = -3

Query: 1015 IQREKITEPDGDPISVLNERIRRDLGGKREISNSNRSKVLDSVEAEKYIQMVXXXXXXXX 836
            +QR +  EP+ D I++LNERIRR+   KR++S   R+ V+DS EA+KYIQ+V        
Sbjct: 63   VQRRERMEPESDDITILNERIRREQS-KRDVS---RAPVVDSEEADKYIQLVKEQQRRGL 118

Query: 835  XXXKSNRDPSADNSNGAAFSYKVDPYALRTGDYVVHKKVGIGRFVGIKFDVQSKTDSKTA 656
               K  R       NG  FSYKVDPY LR+GDYVVHKKVGIGRFVGIK DV   + +   
Sbjct: 119  QKLKGER---VGKENGQ-FSYKVDPYTLRSGDYVVHKKVGIGRFVGIKLDVPKDSSN--- 171

Query: 655  TPMEYVFIEYADGMAKLPVHQASRFLYRYNLPNETKRPRTLSKLSDTSAWEKRRTKGKVA 476
             P+EYVFIEYADGMAKLPV QASR LYRYNLP+E+KRPRTLSKLSDTS WE+RR KG+VA
Sbjct: 172  -PIEYVFIEYADGMAKLPVKQASRMLYRYNLPSESKRPRTLSKLSDTSIWERRRIKGRVA 230

Query: 475  VQKMVVDLMELYLHRLKQRRPPYPRTPAMSEFASHFPYEPTPDQKQAIIDVGKDLTERET 296
            +QKMVVDLMELYLHRLKQ+RPPYP++P M+EF + F YEPTPDQKQA IDV +DLTERET
Sbjct: 231  IQKMVVDLMELYLHRLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFIDVEEDLTERET 290

Query: 295  PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMILAPTIVLAKQHFDVISKRFSKYQDVK 116
            PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAM+LAPTIVLAKQHFDVI++RFSKY ++K
Sbjct: 291  PMDRLICGDVGFGKTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVITERFSKYPNIK 350

Query: 115  VGLLSRFQTKSVKEEYLDMIKHGHLNIIVGTHSLLGNR 2
            VGLLSRFQT + KE++L MIKHG L+IIVGTHSLLGNR
Sbjct: 351  VGLLSRFQTTAEKEKHLRMIKHGDLDIIVGTHSLLGNR 388


>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
            gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
            helicase [Arabidopsis thaliana]
          Length = 823

 Score =  464 bits (1193), Expect = e-128
 Identities = 243/336 (72%), Positives = 272/336 (80%)
 Frame = -3

Query: 1009 REKITEPDGDPISVLNERIRRDLGGKREISNSNRSKVLDSVEAEKYIQMVXXXXXXXXXX 830
            REK    + D IS+LNERIRRDLG KRE +       +DS EAEKYI MV          
Sbjct: 63   REKPELAESDSISLLNERIRRDLG-KRETARP----AMDSEEAEKYIHMVKEQQERGLQK 117

Query: 829  XKSNRDPSADNSNGAAFSYKVDPYALRTGDYVVHKKVGIGRFVGIKFDVQSKTDSKTATP 650
             K  R  +    +GA FSYKVDPY+L +GDYVVHKKVGIGRFVGIKFDV   +      P
Sbjct: 118  LKGIRQGTKAAGDGA-FSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSE----P 172

Query: 649  MEYVFIEYADGMAKLPVHQASRFLYRYNLPNETKRPRTLSKLSDTSAWEKRRTKGKVAVQ 470
            +EYVFIEYADGMAKLP+ QASR LYRYNLPNETKRPRTLS+LSDTS WE+R+TKGKVA+Q
Sbjct: 173  LEYVFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQ 232

Query: 469  KMVVDLMELYLHRLKQRRPPYPRTPAMSEFASHFPYEPTPDQKQAIIDVGKDLTERETPM 290
            KMVVDLMELYLHRL+Q+R PYP+ P M++FA+ FPY  TPDQKQA +DV KDLTERETPM
Sbjct: 233  KMVVDLMELYLHRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPM 292

Query: 289  DRLICGDVGFGKTEVALRAIFCVVSAGKQAMILAPTIVLAKQHFDVISKRFSKYQDVKVG 110
            DRLICGDVGFGKTEVALRAIFCVVS GKQAM+LAPTIVLAKQH+DVIS+RFS Y  +KVG
Sbjct: 293  DRLICGDVGFGKTEVALRAIFCVVSTGKQAMVLAPTIVLAKQHYDVISERFSLYPHIKVG 352

Query: 109  LLSRFQTKSVKEEYLDMIKHGHLNIIVGTHSLLGNR 2
            LLSRFQTK+ KEEYL+MIK GHLNIIVGTHSLLG+R
Sbjct: 353  LLSRFQTKAEKEEYLEMIKTGHLNIIVGTHSLLGSR 388