BLASTX nr result

ID: Panax21_contig00017980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017980
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]         82   5e-14
gb|AAP44391.1| nematode resistance-like protein [Solanum tuberosum]    81   1e-13
gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]    81   1e-13
gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]    81   1e-13
ref|XP_002334314.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13

>gb|AAP44390.1| nematode resistance protein [Solanum tuberosum]
          Length = 1136

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = -2

Query: 476 GQIVLPVFYDVDPLNVRHQTESYAKAFEKHKIRYAE-KVETWRAALTTAANISGYDLKND 300
           GQIV+PVFYDVDP  VR Q   + +AF KH+ R+ E KV+ WRAAL  AANISG+DL N 
Sbjct: 104 GQIVVPVFYDVDPSTVRKQKSIFGEAFSKHEARFQEDKVQKWRAALEEAANISGWDLPNT 163

Query: 299 AN*WTGL*ETNVLERVFED 243
           AN      E  V+E++ ED
Sbjct: 164 ANGH----EARVMEKIAED 178


>gb|AAP44391.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1121

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = -2

Query: 476 GQIVLPVFYDVDPLNVRHQTESYAKAFEKHKIRYAE-KVETWRAALTTAANISGYDLKND 300
           GQIV+PVFYDVDP  VR Q   + +AF KH+ R+ E KV+ WRAAL  AANISG+DL N 
Sbjct: 104 GQIVVPVFYDVDPSTVRRQKNIFGEAFSKHEARFEEDKVKKWRAALEEAANISGWDLPNT 163

Query: 299 AN*WTGL*ETNVLERVFED 243
           +N      E  V+E++ ED
Sbjct: 164 SNGH----EARVIEKITED 178


>gb|AAP44393.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = -2

Query: 476 GQIVLPVFYDVDPLNVRHQTESYAKAFEKHKIRYAE-KVETWRAALTTAANISGYDLKND 300
           GQIV+PVFYDVDP  VR Q   + +AF KH+ R+ E KV+ WRAAL  AANISG+DL N 
Sbjct: 104 GQIVVPVFYDVDPSTVRKQKSIFGEAFSKHEARFQEDKVQKWRAALEEAANISGWDLPNT 163

Query: 299 AN*WTGL*ETNVLERVFED 243
           +N      E  V+E++ ED
Sbjct: 164 SNGH----EARVMEKIAED 178


>gb|AAP44392.1| nematode resistance-like protein [Solanum tuberosum]
          Length = 1136

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/79 (54%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
 Frame = -2

Query: 476 GQIVLPVFYDVDPLNVRHQTESYAKAFEKHKIRYAE-KVETWRAALTTAANISGYDLKND 300
           GQIV+PVFYDVDP  VR Q   + +AF KH+ R+ E KV+ WRAAL  AANISG+DL N 
Sbjct: 104 GQIVVPVFYDVDPSTVRKQKSIFGEAFSKHEARFQEDKVQKWRAALEEAANISGWDLPNT 163

Query: 299 AN*WTGL*ETNVLERVFED 243
           +N      E  V+E++ ED
Sbjct: 164 SNGH----EARVMEKIAED 178


>ref|XP_002334314.1| predicted protein [Populus trichocarpa] gi|222871051|gb|EEF08182.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
 Frame = -2

Query: 476 GQIVLPVFYDVDPLNVRHQTESYAKAFEKHKIRYAEK-VETWRAALTTAANISGYDLKND 300
           GQIVLP+FYD+DP +VR QT S+AKAF+KH+ R+ EK V+ WR AL  AAN+SG  L N 
Sbjct: 102 GQIVLPIFYDIDPSDVRKQTGSFAKAFDKHEKRFEEKLVKEWRKALEDAANLSGRSLNNM 161

Query: 299 AN*WTGL*ETNVLERVFEDPYN 234
           AN      E   ++++ +D  N
Sbjct: 162 ANGH----EAKFIKKIIKDVLN 179


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