BLASTX nr result

ID: Panax21_contig00017960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017960
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509832.1| protein binding protein, putative [Ricinus c...   125   4e-27
ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   112   4e-23
ref|XP_004143894.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   110   2e-22
ref|XP_002298023.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002304508.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21

>ref|XP_002509832.1| protein binding protein, putative [Ricinus communis]
           gi|223549731|gb|EEF51219.1| protein binding protein,
           putative [Ricinus communis]
          Length = 212

 Score =  125 bits (314), Expect = 4e-27
 Identities = 69/133 (51%), Positives = 89/133 (66%), Gaps = 5/133 (3%)
 Frame = +2

Query: 137 SSKGVELHSSPPFYHYPRVSEEHEPLSSPLGTASALSTGLLVDTNLETSILDTYRPPPAP 316
           SSKG E++S+P +Y+YPR SEEH PLSS  G+ + LSTGLLVDTNL+TS+ D YRPPP P
Sbjct: 8   SSKGAEINSAPAYYYYPRASEEHVPLSSRHGSVATLSTGLLVDTNLDTSVPDAYRPPPPP 67

Query: 317 IPYDANLGRPLL--GNQEISGNKSEGAVRTTGTEPVEATNTVITHE-STKMPNKSEGE-- 481
           IP++  +G P    G QE S +K +G V+TT +  V+ T    T E S K  +  E +  
Sbjct: 68  IPFEMAIGCPQTPQGAQETSSDKDDGTVQTTNSGSVQETTYTNTRETSIKCEDVKEPDCK 127

Query: 482 VQTNIELASLKEL 520
            QTN+EL S KEL
Sbjct: 128 AQTNLELDSAKEL 140


>ref|XP_002280000.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Vitis
           vinifera]
          Length = 213

 Score =  112 bits (279), Expect = 4e-23
 Identities = 68/133 (51%), Positives = 84/133 (63%), Gaps = 6/133 (4%)
 Frame = +2

Query: 137 SSKGVELHSSPPFYHYPRVSEEHEPLSSPLGTASALSTGLLVDTNLETSILDTYRPPPAP 316
           SSKG EL+ +P +Y+ PR SEEHEPLSS  G AS LSTGLLVDTNL TS  DTYRPPPAP
Sbjct: 8   SSKGTELNGTPAYYYCPRASEEHEPLSSHHGAASTLSTGLLVDTNLGTSPPDTYRPPPAP 67

Query: 317 IPYDANLGRPLLG--NQEISGNKSEGAVRTTGT----EPVEATNTVITHESTKMPNKSEG 478
           IPYD +LG P      +E   NK++  V+TT +    E VE  N + T    +   +S+ 
Sbjct: 68  IPYDVDLGHPQTPPVAEESCVNKNDTVVQTTNSGSLGEAVEG-NMLETLAKCEDLKQSDC 126

Query: 479 EVQTNIELASLKE 517
           ++    EL S KE
Sbjct: 127 KMLAQSELTSSKE 139


>ref|XP_004143894.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis
           sativus]
          Length = 211

 Score =  110 bits (274), Expect = 2e-22
 Identities = 64/132 (48%), Positives = 86/132 (65%), Gaps = 5/132 (3%)
 Frame = +2

Query: 137 SSKGVELHSSPPFYHYPRVSEEHEPLSSPLGTASALSTGLLVDTNLETSILDTYRPPPAP 316
           SSKG E + +P +Y+YPR SEEH PLS PL T    STGLLVDTNL+TSI DTYR PP P
Sbjct: 8   SSKGTESNIAPGYYYYPRASEEHVPLS-PLRTPREFSTGLLVDTNLDTSIPDTYRSPPLP 66

Query: 317 IPYDANLGRPLLGN--QEISGNKSEGAVRTTGTEPVEATNTVITHEST---KMPNKSEGE 481
           +PYD  L  PL     QEIS  K+E A +TT +  ++ T  + T E++   +  ++S+ +
Sbjct: 67  MPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEGVDESDCK 126

Query: 482 VQTNIELASLKE 517
             T+ E+ +LKE
Sbjct: 127 KHTDFEVDALKE 138


>ref|XP_002298023.1| predicted protein [Populus trichocarpa] gi|222845281|gb|EEE82828.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  107 bits (267), Expect = 1e-21
 Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 6/134 (4%)
 Frame = +2

Query: 137 SSKGV-ELHSSPPFYHYPRVSEEHEPLSSPLGTASALSTGLLVDTNLETSILDTYRPPPA 313
           SSKG  + +S+PP+Y+YPR   EH PLSS     SALSTGLLVDTNL+TS+ D YRPPPA
Sbjct: 8   SSKGAAQSNSAPPYYYYPRAPAEHVPLSSHHAAGSALSTGLLVDTNLDTSVPDAYRPPPA 67

Query: 314 PIPYDANLG--RPLLGNQEISGNKSEGAVRTTGTEPVEATNTVITHEST---KMPNKSEG 478
           P+P+D  +G  + L  ++E  G+K++GA++TT +   +    + T E++   +   + + 
Sbjct: 68  PMPFDVAVGHLQTLHRSRETCGDKNDGALQTTNSASGQENTGLNTRETSAECEDVKELDC 127

Query: 479 EVQTNIELASLKEL 520
           + Q N EL + KEL
Sbjct: 128 KAQINSELDAAKEL 141


>ref|XP_002304508.1| predicted protein [Populus trichocarpa] gi|222841940|gb|EEE79487.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  104 bits (260), Expect = 7e-21
 Identities = 59/129 (45%), Positives = 81/129 (62%), Gaps = 6/129 (4%)
 Frame = +2

Query: 152 ELHSSPPFYHYPRVSEEHEPLSSPLGTASAL-STGLLVDTNLETSILDTYRPPPAPIPYD 328
           + +++PPF++YPR SEEH  LSS     S L STGLLVDTNL+TS+ D YRPPPAPIP+D
Sbjct: 53  QFNNAPPFFYYPRTSEEHVSLSSHQAPGSVLQSTGLLVDTNLDTSVPDAYRPPPAPIPFD 112

Query: 329 ANLGRPLLGN--QEISGNKSEGAVRTTGTEPVEATNTVITHESTKMPNKSEG---EVQTN 493
           A +GRP      +E+ G+K+ GA++TT +   +    + T E       ++    +VQ N
Sbjct: 113 AAVGRPQTPGRLREVRGDKNHGALQTTTSASGQENTALNTREPLAKCEDAKDLDCKVQIN 172

Query: 494 IELASLKEL 520
            E  S KEL
Sbjct: 173 SEPGSAKEL 181


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