BLASTX nr result

ID: Panax21_contig00017955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017955
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    94   9e-18
ref|ZP_01682799.1| fatty oxidation complex alpha subunit [Vibrio...    79   3e-13
ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...    76   2e-12
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...    71   1e-10
emb|CAB82966.1| putative protein [Arabidopsis thaliana]                70   1e-10

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/122 (40%), Positives = 79/122 (64%)
 Frame = -3

Query: 494 FYNLTVRISGSSYVTSNNAFLEISETYIILSEWERSNDRELKQMAKAMKRKYDKYWGNVT 315
           F+++T+RISGS + TSN  F ++     ++ ++ +SND  L  MA+ MK KYDKYWGN+ 
Sbjct: 286 FFDVTLRISGSLFTTSNAYFHKLCLIRNLIRKYLKSNDLLLSDMAQNMKAKYDKYWGNLK 345

Query: 314 KMNMLLYLPIVLDLQYKLSFVQFGLERMYGNGEIEVENPLEGLEIDLHFDIDNEYRNLEY 135
           + N+LLY+ +VLD +YKL FVQF  +++Y   + EV   +    +D+   + +EYR L +
Sbjct: 346 RSNLLLYVVVVLDPRYKLKFVQFCFDQLY---DKEVAKDMSTRVVDVLRKLYDEYRLLYF 402

Query: 134 QS 129
            +
Sbjct: 403 HN 404


>ref|ZP_01682799.1| fatty oxidation complex alpha subunit [Vibrio cholerae V52]
           gi|121627762|gb|EAX60388.1| fatty oxidation complex
           alpha subunit [Vibrio cholerae V52]
          Length = 275

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
 Frame = -3

Query: 494 FYNLTVRISGSSYVTSNNAFLEISETYIILSEWERSNDRELKQMAKAMKRKYDKYWGNVT 315
           FY LT+++SGS YVT N  F +I E    L     S++ +L +MA  MK K+ KYWG   
Sbjct: 11  FYELTLKVSGSRYVTCNVHFEDICELDAYLKACMASDEVDLSKMASGMKEKFKKYWGTPE 70

Query: 314 KMNMLLYLPIVLDLQYKLSFVQFGLERMYG--NGEIEVENPLEGLEIDLHFDIDNEYRNL 141
           KMN +L++  VLD + K  +V F LE + G   G+I V N +E     L     ++Y   
Sbjct: 71  KMNKMLFIASVLDPRNKFVYVNFALEELLGEEKGKI-VNNEVEAYLKKLFAIYVSKYAK- 128

Query: 140 EYQSSNKATWMEIAD----GVKRSME--DLFNEYRKKYSTQESGKLSLSN 9
              S N+ +  +++D    G+ ++++   L  ++  K   ++SG L + +
Sbjct: 129 --GSKNQPSSSDLSDSSTCGLSQNVKTNSLRTKFYMKKQKEDSGSLGVKS 176


>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/93 (43%), Positives = 54/93 (58%)
 Frame = -3

Query: 494 FYNLTVRISGSSYVTSNNAFLEISETYIILSEWERSNDRELKQMAKAMKRKYDKYWGNVT 315
           FY+ TVRISGSSY+TSN    EI      + E   S D  L+ MA+ MK KYDKYWGN  
Sbjct: 414 FYDATVRISGSSYLTSNIYMFEILGIGKRIVEMCSSEDVHLRSMAQRMKLKYDKYWGNYK 473

Query: 314 KMNMLLYLPIVLDLQYKLSFVQFGLERMYGNGE 216
            +NM+L + +V D + K+    + + R Y   +
Sbjct: 474 SLNMMLLVALVFDPRRKVRLADWMIRRFYNEDD 506


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
 Frame = -3

Query: 494  FYNLTVRISGSSYVTSNNAFLEISETYIILSEWE--RSNDRELKQMAKAMKRKYDKYWGN 321
            F+ +T ++SGS+YVTS+  F+E  +     + W     +D  L  MA  M  KY KYWG+
Sbjct: 1331 FFEITKKVSGSTYVTSSTYFMEHCKILGGFNAWMGCHKDDPILANMATKMTAKYSKYWGD 1390

Query: 320  VTKMNMLLYLPIVLDLQYKLSFVQFGLERMY 228
            V KMNML+++ ++   + K  F+ +GL + Y
Sbjct: 1391 VAKMNMLVFIAVIFYPRRKFQFINWGLNKYY 1421


>emb|CAB82966.1| putative protein [Arabidopsis thaliana]
          Length = 705

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/92 (39%), Positives = 52/92 (56%)
 Frame = -3

Query: 494 FYNLTVRISGSSYVTSNNAFLEISETYIILSEWERSNDRELKQMAKAMKRKYDKYWGNVT 315
           FY+ T+  S S  VTSN  + EI +    + +   S D +L++MA AM  K+DKYW    
Sbjct: 407 FYDSTLAFSSSIKVTSNGCYNEICKIQSSVQKMAFSQDSDLREMASAMTAKFDKYWEGTE 466

Query: 314 KMNMLLYLPIVLDLQYKLSFVQFGLERMYGNG 219
           K+N +L +  VLD + K+ F  F  E +YG G
Sbjct: 467 KINKILIVAGVLDPRRKMVFTMFSFELIYGKG 498


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