BLASTX nr result

ID: Panax21_contig00017946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017946
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago ...    76   3e-12
gb|AFK43736.1| unknown [Medicago truncatula]                           74   9e-12
gb|AFK48292.1| unknown [Lotus japonicus]                               74   1e-11
dbj|BAF02556.1| hypothetical protein [Nicotiana benthamiana]           72   5e-11

>ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|222869144|gb|EEF06275.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = -1

Query: 344 NNSYGTSWADQWD--PLPEYYDXXXXXXXXXXXXXXXXXKVGDGLGKTKSVASNGAKKVR 171
           N+S+ TSWADQWD  P P  YD                  VG+GLGKTK VAS G KKV+
Sbjct: 4   NSSHETSWADQWDYNPDPAVYDHSKDSSSDSTAKYKQK--VGEGLGKTKQVASTGIKKVK 61

Query: 170 EGTSIGLQWLKDKYHNKKTT 111
           EGTS+G +W+KDKY  +KTT
Sbjct: 62  EGTSVGFRWIKDKY--QKTT 79


>ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago truncatula]
           gi|355509982|gb|AES91124.1| hypothetical protein
           MTR_4g106500 [Medicago truncatula]
          Length = 82

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/84 (51%), Positives = 50/84 (59%)
 Frame = -1

Query: 356 GNNYNNSYGTSWADQWDPLPEYYDXXXXXXXXXXXXXXXXXKVGDGLGKTKSVASNGAKK 177
           GN YN SYGTSWADQWD  P   D                 K G+GLGKTK VAS G KK
Sbjct: 4   GNVYN-SYGTSWADQWDNGP---DPIMADTNNNKSTTKYKEKFGEGLGKTKGVASTGVKK 59

Query: 176 VREGTSIGLQWLKDKYHNKKTTAH 105
           +++GTS+GL W+K KY +K T  H
Sbjct: 60  LKDGTSVGLNWIKTKY-SKATHKH 82


>gb|AFK43736.1| unknown [Medicago truncatula]
          Length = 82

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/84 (50%), Positives = 50/84 (59%)
 Frame = -1

Query: 356 GNNYNNSYGTSWADQWDPLPEYYDXXXXXXXXXXXXXXXXXKVGDGLGKTKSVASNGAKK 177
           GN YN SYGTSWADQWD  P   D                 K G+GLGKTK VAS G KK
Sbjct: 4   GNVYN-SYGTSWADQWDNGP---DPIMADTNNNKSTTKYKEKFGEGLGKTKGVASTGVKK 59

Query: 176 VREGTSIGLQWLKDKYHNKKTTAH 105
           +++GTS+GL W+K +Y +K T  H
Sbjct: 60  LKDGTSVGLNWIKTEY-SKATHKH 82


>gb|AFK48292.1| unknown [Lotus japonicus]
          Length = 84

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = -1

Query: 359 LGNNYNNSYGTSWADQWDPLPE-YYDXXXXXXXXXXXXXXXXXKVGDGLGKTKSVASNGA 183
           +  NYN SYGTSWADQWD  P+                     K+G+GLGKTK+VAS+G 
Sbjct: 1   MNGNYN-SYGTSWADQWDDGPDPIMVGSNNKSNGGGATTKYKEKLGEGLGKTKTVASSGI 59

Query: 182 KKVREGTSIGLQWLKDKYHNKKTTAH 105
           KK+++GTS+G+ W+K KY +K T  H
Sbjct: 60  KKLKDGTSVGIHWIKTKY-SKATQKH 84


>dbj|BAF02556.1| hypothetical protein [Nicotiana benthamiana]
          Length = 90

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/80 (51%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
 Frame = -1

Query: 353 NNYN--NSYGTSWADQWDPLPEY--YDXXXXXXXXXXXXXXXXXKVGDGLGKTKSVASNG 186
           NNY   NS  TSWADQWDP P    Y                  KVGD  GKTKSVAS G
Sbjct: 5   NNYTAYNSQETSWADQWDPAPASXEYKXFNDKKSGTNATSKISSKVGDTFGKTKSVASTG 64

Query: 185 AKKVREGTSIGLQWLKDKYH 126
            KKV+ G + G QW+KDK H
Sbjct: 65  VKKVKSGATAGFQWIKDKCH 84


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