BLASTX nr result

ID: Panax21_contig00017945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017945
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago ...    75   7e-12
gb|AFK43736.1| unknown [Medicago truncatula]                           73   2e-11
gb|AFK48292.1| unknown [Lotus japonicus]                               72   4e-11
dbj|BAF02556.1| hypothetical protein [Nicotiana benthamiana]           72   5e-11

>ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|222869144|gb|EEF06275.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 39/74 (52%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
 Frame = +2

Query: 155 NNSYGTSWADQWD--PLPEYYDXXXXXXXXXXXXXXXXXXVGDGLGKTKSVASNGAKKVR 328
           N+S+ TSWADQWD  P P  YD                  VG+GLGKTK VAS G KKV+
Sbjct: 4   NSSHETSWADQWDYNPDPAVYDHSKDSSSDSTAKYKQK--VGEGLGKTKQVASTGIKKVK 61

Query: 329 EGTSIGLQWLKDKY 370
           EGTS+G +W+KDKY
Sbjct: 62  EGTSVGFRWIKDKY 75


>ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago truncatula]
           gi|355509982|gb|AES91124.1| hypothetical protein
           MTR_4g106500 [Medicago truncatula]
          Length = 82

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/76 (51%), Positives = 45/76 (59%)
 Frame = +2

Query: 143 GNNYNNSYGTSWADQWDPLPEYYDXXXXXXXXXXXXXXXXXXVGDGLGKTKSVASNGAKK 322
           GN YN SYGTSWADQWD  P   D                   G+GLGKTK VAS G KK
Sbjct: 4   GNVYN-SYGTSWADQWDNGP---DPIMADTNNNKSTTKYKEKFGEGLGKTKGVASTGVKK 59

Query: 323 VREGTSIGLQWLKDKY 370
           +++GTS+GL W+K KY
Sbjct: 60  LKDGTSVGLNWIKTKY 75


>gb|AFK43736.1| unknown [Medicago truncatula]
          Length = 82

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/76 (50%), Positives = 45/76 (59%)
 Frame = +2

Query: 143 GNNYNNSYGTSWADQWDPLPEYYDXXXXXXXXXXXXXXXXXXVGDGLGKTKSVASNGAKK 322
           GN YN SYGTSWADQWD  P   D                   G+GLGKTK VAS G KK
Sbjct: 4   GNVYN-SYGTSWADQWDNGP---DPIMADTNNNKSTTKYKEKFGEGLGKTKGVASTGVKK 59

Query: 323 VREGTSIGLQWLKDKY 370
           +++GTS+GL W+K +Y
Sbjct: 60  LKDGTSVGLNWIKTEY 75


>gb|AFK48292.1| unknown [Lotus japonicus]
          Length = 84

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = +2

Query: 140 LGNNYNNSYGTSWADQWDPLPE-YYDXXXXXXXXXXXXXXXXXXVGDGLGKTKSVASNGA 316
           +  NYN SYGTSWADQWD  P+                      +G+GLGKTK+VAS+G 
Sbjct: 1   MNGNYN-SYGTSWADQWDDGPDPIMVGSNNKSNGGGATTKYKEKLGEGLGKTKTVASSGI 59

Query: 317 KKVREGTSIGLQWLKDKY 370
           KK+++GTS+G+ W+K KY
Sbjct: 60  KKLKDGTSVGIHWIKTKY 77


>dbj|BAF02556.1| hypothetical protein [Nicotiana benthamiana]
          Length = 90

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/80 (50%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
 Frame = +2

Query: 146 NNYN--NSYGTSWADQWDPLPEY--YDXXXXXXXXXXXXXXXXXXVGDGLGKTKSVASNG 313
           NNY   NS  TSWADQWDP P    Y                   VGD  GKTKSVAS G
Sbjct: 5   NNYTAYNSQETSWADQWDPAPASXEYKXFNDKKSGTNATSKISSKVGDTFGKTKSVASTG 64

Query: 314 AKKVREGTSIGLQWLKDKYH 373
            KKV+ G + G QW+KDK H
Sbjct: 65  VKKVKSGATAGFQWIKDKCH 84


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