BLASTX nr result

ID: Panax21_contig00017943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017943
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534061.1| Eukaryotic initiation factor iso-4F subunit ...   203   1e-50
ref|XP_002324526.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-...   201   7e-50
ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-...   201   7e-50
emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera]   201   7e-50

>ref|XP_002534061.1| Eukaryotic initiation factor iso-4F subunit p82-34, putative
           [Ricinus communis] gi|223525907|gb|EEF28321.1|
           Eukaryotic initiation factor iso-4F subunit p82-34,
           putative [Ricinus communis]
          Length = 587

 Score =  203 bits (516), Expect = 1e-50
 Identities = 98/128 (76%), Positives = 113/128 (88%)
 Frame = -1

Query: 386 SPEELGRKTISLLEEYFSVRMLDEALQCVEELKSPDYHPEFVKQAIALSLEKSPPCVEPV 207
           +P EL RKTISLL+EYFSVR+LDEALQCVEEL SP YHPE VK+ I L LE++PPCVEPV
Sbjct: 419 NPNELRRKTISLLKEYFSVRLLDEALQCVEELNSPVYHPEIVKEVICLGLEENPPCVEPV 478

Query: 206 AKLLDYLYAKKVFTSSDIQSGCLLYGSNLDDVGIDLPKAPNNFGEVIGKLVLAGELNFKV 27
           AKLL+YL++KKV T+ DI +GCLLYGS LDD+GIDLPKAPNNFGE+IG LVLAG ++FKV
Sbjct: 479 AKLLEYLFSKKVLTAKDIGTGCLLYGSMLDDIGIDLPKAPNNFGEIIGLLVLAGGMDFKV 538

Query: 26  VEEVLKKM 3
           V EVLKKM
Sbjct: 539 VREVLKKM 546


>ref|XP_002324526.1| predicted protein [Populus trichocarpa] gi|222865960|gb|EEF03091.1|
            predicted protein [Populus trichocarpa]
          Length = 793

 Score =  202 bits (515), Expect = 2e-50
 Identities = 97/129 (75%), Positives = 116/129 (89%)
 Frame = -1

Query: 389  LSPEELGRKTISLLEEYFSVRMLDEALQCVEELKSPDYHPEFVKQAIALSLEKSPPCVEP 210
            ++P+EL RKT+SLL+EYFSV +LDEALQCVEELKSP YHPE VK+AI ++LE +PPCVEP
Sbjct: 624  VNPDELKRKTVSLLKEYFSVLLLDEALQCVEELKSPGYHPEVVKEAIFIALEANPPCVEP 683

Query: 209  VAKLLDYLYAKKVFTSSDIQSGCLLYGSNLDDVGIDLPKAPNNFGEVIGKLVLAGELNFK 30
            VAKLL+YL++KKV T+ DI +GCLLYGS LDD+GIDLPKAPNNFGE+IGKLVL G L+FK
Sbjct: 684  VAKLLEYLFSKKVLTAKDIGTGCLLYGSMLDDIGIDLPKAPNNFGEIIGKLVLVGGLDFK 743

Query: 29   VVEEVLKKM 3
            +V EVLKKM
Sbjct: 744  MVIEVLKKM 752


>ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
            isoform 2 [Vitis vinifera]
          Length = 795

 Score =  201 bits (510), Expect = 7e-50
 Identities = 95/129 (73%), Positives = 117/129 (90%)
 Frame = -1

Query: 389  LSPEELGRKTISLLEEYFSVRMLDEALQCVEELKSPDYHPEFVKQAIALSLEKSPPCVEP 210
            L+ ++L RKT+SLLEEYF VR+LDEALQCVEELKSP YHPE VK+AI+L+LEKSPPCV+P
Sbjct: 626  LNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKEAISLALEKSPPCVDP 685

Query: 209  VAKLLDYLYAKKVFTSSDIQSGCLLYGSNLDDVGIDLPKAPNNFGEVIGKLVLAGELNFK 30
            VAKLL++L++KKV T+ DI +GCL+YGS LDD+GIDLPKAPN+FGEVIG LVLAG L+FK
Sbjct: 686  VAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGIDLPKAPNSFGEVIGNLVLAGALDFK 745

Query: 29   VVEEVLKKM 3
            VV E++KK+
Sbjct: 746  VVTEIMKKV 754


>ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
            isoform 1 [Vitis vinifera]
          Length = 794

 Score =  201 bits (510), Expect = 7e-50
 Identities = 95/129 (73%), Positives = 117/129 (90%)
 Frame = -1

Query: 389  LSPEELGRKTISLLEEYFSVRMLDEALQCVEELKSPDYHPEFVKQAIALSLEKSPPCVEP 210
            L+ ++L RKT+SLLEEYF VR+LDEALQCVEELKSP YHPE VK+AI+L+LEKSPPCV+P
Sbjct: 625  LNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKEAISLALEKSPPCVDP 684

Query: 209  VAKLLDYLYAKKVFTSSDIQSGCLLYGSNLDDVGIDLPKAPNNFGEVIGKLVLAGELNFK 30
            VAKLL++L++KKV T+ DI +GCL+YGS LDD+GIDLPKAPN+FGEVIG LVLAG L+FK
Sbjct: 685  VAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGIDLPKAPNSFGEVIGNLVLAGALDFK 744

Query: 29   VVEEVLKKM 3
            VV E++KK+
Sbjct: 745  VVTEIMKKV 753


>emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera]
          Length = 794

 Score =  201 bits (510), Expect = 7e-50
 Identities = 95/129 (73%), Positives = 117/129 (90%)
 Frame = -1

Query: 389  LSPEELGRKTISLLEEYFSVRMLDEALQCVEELKSPDYHPEFVKQAIALSLEKSPPCVEP 210
            L+ ++L RKT+SLLEEYF VR+LDEALQCVEELKSP YHPE VK+AI+L+LEKSPPCV+P
Sbjct: 625  LNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKEAISLALEKSPPCVDP 684

Query: 209  VAKLLDYLYAKKVFTSSDIQSGCLLYGSNLDDVGIDLPKAPNNFGEVIGKLVLAGELNFK 30
            VAKLL++L++KKV T+ DI +GCL+YGS LDD+GIDLPKAPN+FGEVIG LVLAG L+FK
Sbjct: 685  VAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGIDLPKAPNSFGEVIGNLVLAGALDFK 744

Query: 29   VVEEVLKKM 3
            VV E++KK+
Sbjct: 745  VVTEIMKKV 753


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