BLASTX nr result

ID: Panax21_contig00017922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017922
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285107.1| PREDICTED: ethylene-responsive transcription...   190   3e-46
ref|XP_003522617.1| PREDICTED: ethylene-responsive transcription...   188   2e-45
ref|XP_002515519.1| DNA binding protein, putative [Ricinus commu...   182   8e-44
ref|XP_002324859.1| AP2/ERF domain-containing transcription fact...   177   3e-42
ref|NP_197921.1| ethylene-responsive transcription factor SHINE ...   176   8e-42

>ref|XP_002285107.1| PREDICTED: ethylene-responsive transcription factor SHINE 3-like
           [Vitis vinifera]
          Length = 194

 Score =  190 bits (483), Expect = 3e-46
 Identities = 107/208 (51%), Positives = 126/208 (60%), Gaps = 8/208 (3%)
 Frame = -1

Query: 804 SKKFRGVRQRQWGSWVSEVRHPLLKRRIWLGTFXXXXXXXXXXXXXAVLMNGQNAKTNFP 625
           +KKFRGVRQRQWGSWVSE+RHPLLKRR+WLGTF             A+LMNGQNAKTNFP
Sbjct: 5   TKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFESAEAAARAYDQAAILMNGQNAKTNFP 64

Query: 624 IITKSDNSDLKTXXXXXXXXXXXXXXSA-------KLRKCCKGTAPSLTCLRLDTDNSHI 466
           ++ K+D  ++K+               A       KLRKCCK  +PSLTCLRLDTDNSH+
Sbjct: 65  VV-KNDQGEVKSSAGTDHEDESPLSRKALSEILTTKLRKCCKDPSPSLTCLRLDTDNSHL 123

Query: 465 GVWQKRAGQQSGSNWVMRVELGKKNKAQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 286
           GVWQKRAG +SGS+WVMRVELGKK+  Q+                               
Sbjct: 124 GVWQKRAGTRSGSSWVMRVELGKKD-GQVSDENSSSFLRSPRGGA--------------- 167

Query: 285 XSYPVGEQMD-EENRNAMQMIEELLNWN 205
                G+ +D EE+R AMQMIEELLNWN
Sbjct: 168 ---EAGDGVDGEEDRMAMQMIEELLNWN 192


>ref|XP_003522617.1| PREDICTED: ethylene-responsive transcription factor SHINE 3-like
           [Glycine max]
          Length = 192

 Score =  188 bits (477), Expect = 2e-45
 Identities = 107/203 (52%), Positives = 116/203 (57%)
 Frame = -1

Query: 813 MVQSKKFRGVRQRQWGSWVSEVRHPLLKRRIWLGTFXXXXXXXXXXXXXAVLMNGQNAKT 634
           MVQ+KKFRGVRQRQWGSWVSE+RHPLLKRR+WLGTF             A+LMNGQNAKT
Sbjct: 1   MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT 60

Query: 633 NFPIITKSDNSDLKTXXXXXXXXXXXXXXSAKLRKCCKGTAPSLTCLRLDTDNSHIGVWQ 454
           NFP       +D                 S KLRK CK  APSLTCLRLD DNSHIGVWQ
Sbjct: 61  NFPTSKNQAEADHDNNNTFLSPKALSELLSTKLRKYCKDPAPSLTCLRLDADNSHIGVWQ 120

Query: 453 KRAGQQSGSNWVMRVELGKKNKAQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYP 274
           K AG  SGSNWVMRVELGKK   QI                                   
Sbjct: 121 KGAGPHSGSNWVMRVELGKK---QIITEGESTGSPQSTNIGAVENNEVEVEVEV------ 171

Query: 273 VGEQMDEENRNAMQMIEELLNWN 205
             E+ +EE+R A+QMIEELLNWN
Sbjct: 172 --EEEEEEDRVALQMIEELLNWN 192


>ref|XP_002515519.1| DNA binding protein, putative [Ricinus communis]
           gi|223545463|gb|EEF46968.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 192

 Score =  182 bits (462), Expect = 8e-44
 Identities = 106/204 (51%), Positives = 119/204 (58%), Gaps = 1/204 (0%)
 Frame = -1

Query: 813 MVQSKKFRGVRQRQWGSWVSEVRHPLLKRRIWLGTFXXXXXXXXXXXXXAVLMNGQNAKT 634
           MVQSKK+RGVRQRQWGSWVSE+RHPLLKRRIWLGTF             A+LMNGQNAKT
Sbjct: 1   MVQSKKYRGVRQRQWGSWVSEIRHPLLKRRIWLGTFETAEAAARAYDQAAILMNGQNAKT 60

Query: 633 NFPIITKSDNSDLKTXXXXXXXXXXXXXXSAKLRKCCKGTAP-SLTCLRLDTDNSHIGVW 457
           NFP     + SD                 + KLRKCCK  +P SLTCLRLD DNSHIGVW
Sbjct: 61  NFPRSDAEETSD-DNDSPLPSSKALSELLNTKLRKCCKDPSPASLTCLRLDNDNSHIGVW 119

Query: 456 QKRAGQQSGSNWVMRVELGKKNKAQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSY 277
           QK +G +S SNWVM+VELG K K Q+                                + 
Sbjct: 120 QKHSGSRSSSNWVMKVELGNK-KTQV---------IEEERSSQSSTSSLTSISSPTVENQ 169

Query: 276 PVGEQMDEENRNAMQMIEELLNWN 205
           P+    DEE+R AMQMIEELLNWN
Sbjct: 170 PI-NGTDEEDRIAMQMIEELLNWN 192


>ref|XP_002324859.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|118486668|gb|ABK95171.1| unknown
           [Populus trichocarpa] gi|222866293|gb|EEF03424.1|
           AP2/ERF domain-containing transcription factor [Populus
           trichocarpa]
          Length = 178

 Score =  177 bits (449), Expect = 3e-42
 Identities = 103/205 (50%), Positives = 117/205 (57%), Gaps = 2/205 (0%)
 Frame = -1

Query: 813 MVQSKKFRGVRQRQWGSWVSEVRHPLLKRRIWLGTFXXXXXXXXXXXXXAVLMNGQNAKT 634
           MVQSKKFRGVRQRQWGSWVSE+RHPLLKRR+WLGTF             A+LMNGQNAKT
Sbjct: 1   MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMNGQNAKT 60

Query: 633 NFPIITKSDNSDL-KTXXXXXXXXXXXXXXSAKLRKCC-KGTAPSLTCLRLDTDNSHIGV 460
           NFP      +++L K               ++KLRKCC K  +PSLTCLRLD DNSHIGV
Sbjct: 61  NFPTSHLDQDTNLGKDNNSPLPAKALAELLNSKLRKCCGKDPSPSLTCLRLDNDNSHIGV 120

Query: 459 WQKRAGQQSGSNWVMRVELGKKNKAQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 280
           WQK+AG +S SNWVM+VELG  NK                                    
Sbjct: 121 WQKKAGSRSSSNWVMKVELGNYNK---------------------------KTESSPTVE 153

Query: 279 YPVGEQMDEENRNAMQMIEELLNWN 205
                  +EE+R AMQMIEELLN N
Sbjct: 154 IEPENGTEEEDRIAMQMIEELLNRN 178


>ref|NP_197921.1| ethylene-responsive transcription factor SHINE 3 [Arabidopsis
           thaliana] gi|122214280|sp|Q3E958.1|SHN3_ARATH RecName:
           Full=Ethylene-responsive transcription factor SHINE 3
           gi|332006052|gb|AED93435.1| ethylene-responsive
           transcription factor SHINE 3 [Arabidopsis thaliana]
          Length = 189

 Score =  176 bits (445), Expect = 8e-42
 Identities = 97/202 (48%), Positives = 114/202 (56%)
 Frame = -1

Query: 813 MVQSKKFRGVRQRQWGSWVSEVRHPLLKRRIWLGTFXXXXXXXXXXXXXAVLMNGQNAKT 634
           MV SKKFRGVRQRQWGSWVSE+RHPLLKRR+WLGTF             AVLMNGQ+AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 633 NFPIITKSDNSDLKTXXXXXXXXXXXXXXSAKLRKCCKGTAPSLTCLRLDTDNSHIGVWQ 454
           NFP+I  + ++ L+               +AKLRK CK   P LTCLRLD D+SHIGVWQ
Sbjct: 61  NFPVIKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQ 120

Query: 453 KRAGQQSGSNWVMRVELGKKNKAQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYP 274
           KRAG ++  NWV  VELG K  A+                                    
Sbjct: 121 KRAGSKTSPNWVKLVELGDKVNARPGGDIETNKMKVR----------------------- 157

Query: 273 VGEQMDEENRNAMQMIEELLNW 208
             E + E+++ AMQMIEELLNW
Sbjct: 158 -NEDVQEDDQMAMQMIEELLNW 178


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