BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017916
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37
ref|XP_002516850.1| pentatricopeptide repeat-containing protein,...   157   6e-37
emb|CBI26127.3| unnamed protein product [Vitis vinifera]              153   1e-35
ref|XP_003609573.1| Pentatricopeptide repeat-containing protein ...   152   3e-35
ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34

>ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Vitis vinifera]
          Length = 623

 Score =  157 bits (398), Expect = 6e-37
 Identities = 77/129 (59%), Positives = 94/129 (72%)
 Frame = +3

Query: 3   SLIDMYGKCVSPFSANRVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIA 182
           SLIDMYGKC+S  SA RVFE+M + NEVS CSLLFAY ++   + AR VFD MPK+V IA
Sbjct: 111 SLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIA 170

Query: 183 WNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIV 362
           WN MI+G  + G +ELC  LFKKM E+S  PDQWTFSAL++   E +E  YG ++H  I+
Sbjct: 171 WNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFII 230

Query: 363 KSGWALAVE 389
           KSGW  AVE
Sbjct: 231 KSGWVKAVE 239



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/129 (30%), Positives = 68/129 (52%)
 Frame = +3

Query: 3   SLIDMYGKCVSPFSANRVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIA 182
           S++  Y K        +VFE +G+  +VS  +++ A++   + + A  VF   P++  ++
Sbjct: 243 SILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVS 302

Query: 183 WNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIV 362
           W +MI G AR G+ E   S F KM+EN   PD +TF A++  C       +G ++H  I+
Sbjct: 303 WTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSII 362

Query: 363 KSGWALAVE 389
             G+   V+
Sbjct: 363 HYGFHAYVD 371



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/92 (36%), Positives = 50/92 (54%)
 Frame = +3

Query: 96  SLLFAYVNADEINAARSVFDTMPKRVNIAWNTMIAGSARLGYIELCFSLFKKMLENSCGP 275
           S + A      I +AR +FD MP +  +AWN M+A  ++LG  +    LF  M   +  P
Sbjct: 10  SKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRP 69

Query: 276 DQWTFSALMSGCGEAREFRYGCVVHALIVKSG 371
           D++TF+A +S C    E R G  +HA +V SG
Sbjct: 70  DRFTFTATLSACAGLGELRRGMKIHAQVVVSG 101


>ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543938|gb|EEF45464.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score =  157 bits (398), Expect = 6e-37
 Identities = 72/129 (55%), Positives = 95/129 (73%)
 Frame = +3

Query: 3   SLIDMYGKCVSPFSANRVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIA 182
           SLIDMYGKC   FSA +VF++MG  NEVS CSLLFAY N+   + A  +F+ MP++  IA
Sbjct: 111 SLIDMYGKCFDAFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIA 170

Query: 183 WNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIV 362
           WNTMIAG  R G IELC  +F++M E+   PDQWT+SAL+S C E+ EF  GC++H L++
Sbjct: 171 WNTMIAGLGRYGEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVI 230

Query: 363 KSGWALAVE 389
           +SGW+ A+E
Sbjct: 231 RSGWSSAME 239



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/125 (30%), Positives = 66/125 (52%)
 Frame = +3

Query: 3   SLIDMYGKCVSPFSANRVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIA 182
           S++ +Y K  S   A +V E  G   +VS  +++ AY+    +N A  +F ++P++  ++
Sbjct: 243 SILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVS 302

Query: 183 WNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIV 362
           W +MI G AR GY E     F  M  N   PD +TF A++  C       +G +VH   +
Sbjct: 303 WTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAI 362

Query: 363 KSGWA 377
           ++G++
Sbjct: 363 RNGFS 367



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/79 (39%), Positives = 49/79 (62%)
 Frame = +3

Query: 138 ARSVFDTMPKRVNIAWNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGE 317
           AR +FD MP R  +AWN+MI   ++LG+ +   S+F +M   +  PD +TF+A +S C  
Sbjct: 24  ARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMRNTNTKPDHFTFTATLSACAG 83

Query: 318 AREFRYGCVVHALIVKSGW 374
           A  F +G  +HAL++  G+
Sbjct: 84  AGSFPFGTKIHALVIILGY 102


>emb|CBI26127.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/124 (59%), Positives = 91/124 (73%)
 Frame = +3

Query: 3   SLIDMYGKCVSPFSANRVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIA 182
           SLIDMYGKC+S  SA RVFE+M + NEVS CSLLFAY ++   + AR VFD MPK+V IA
Sbjct: 111 SLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIA 170

Query: 183 WNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIV 362
           WN MI+G  + G +ELC  LFKKM E+S  PDQWTFSAL++   E +E  YG ++H  I+
Sbjct: 171 WNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFII 230

Query: 363 KSGW 374
           KSGW
Sbjct: 231 KSGW 234



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/113 (31%), Positives = 63/113 (55%)
 Frame = +3

Query: 51  RVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIAWNTMIAGSARLGYIEL 230
           +VFE +G+  +VS  +++ A++   + + A  VF   P++  ++W +MI G AR G+ E 
Sbjct: 239 KVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQ 298

Query: 231 CFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIVKSGWALAVE 389
             S F KM+EN   PD +TF A++  C       +G ++H  I+  G+   V+
Sbjct: 299 ALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVD 351



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/92 (36%), Positives = 50/92 (54%)
 Frame = +3

Query: 96  SLLFAYVNADEINAARSVFDTMPKRVNIAWNTMIAGSARLGYIELCFSLFKKMLENSCGP 275
           S + A      I +AR +FD MP +  +AWN M+A  ++LG  +    LF  M   +  P
Sbjct: 10  SKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRP 69

Query: 276 DQWTFSALMSGCGEAREFRYGCVVHALIVKSG 371
           D++TF+A +S C    E R G  +HA +V SG
Sbjct: 70  DRFTFTATLSACAGLGELRRGMKIHAQVVVSG 101


>ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510628|gb|AES91770.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/129 (53%), Positives = 91/129 (70%)
 Frame = +3

Query: 3   SLIDMYGKCVSPFSANRVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIA 182
           +LIDMYGKC +P  A +VF++M   NEV+ CSLLFAY N    + A  +F +MP++V IA
Sbjct: 112 ALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIA 171

Query: 183 WNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIV 362
           WN +IA  AR G +E C  LFK+M EN   PDQWTFSALMS C E+ E  +GC++H  ++
Sbjct: 172 WNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCFVI 231

Query: 363 KSGWALAVE 389
           KSGW+ A+E
Sbjct: 232 KSGWSTAME 240



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = +3

Query: 96  SLLFAYVNADEINAARSVFDTMPKRVNIAWNTMIAGSARLGYIELCFSLFKKMLE-NSCG 272
           S + +   +  I  AR +FD MP+R  +AWN M+   +RLG  +  F LF  M   +   
Sbjct: 10  SEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSK 69

Query: 273 PDQWTFSALMSGCGEAREFRYGCVVHALIVKSGW 374
           PD +++SA ++ C  A + R+G  +H+L+V SG+
Sbjct: 70  PDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGY 103



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/123 (28%), Positives = 57/123 (46%)
 Frame = +3

Query: 3   SLIDMYGKCVSPFSANRVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIA 182
           S++  Y K      A +VF   G  N+VS  +++ A++   +   A   F   P++  ++
Sbjct: 244 SIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVS 303

Query: 183 WNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIV 362
           W +MI G  R G  +L  SLF  M  NS   D     A++  C       +G +VH+ I+
Sbjct: 304 WTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCII 363

Query: 363 KSG 371
             G
Sbjct: 364 HLG 366


>ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/129 (52%), Positives = 90/129 (69%)
 Frame = +3

Query: 3   SLIDMYGKCVSPFSANRVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIA 182
           SLIDMYGKC+ P  A +VF++    NEV+ CSL+FAY N+  +  A  +F +MP+RV IA
Sbjct: 113 SLIDMYGKCLLPDDARKVFDETSDSNEVTWCSLMFAYANSCRLGVALELFRSMPERVVIA 172

Query: 183 WNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIV 362
           WN MI G AR G +E C  LFK+M  + C PDQWTFSAL++ C  + E  YGC+VH  ++
Sbjct: 173 WNIMIVGHARRGEVEACLHLFKEMCGSLCQPDQWTFSALINACAVSMEMLYGCMVHGFVI 232

Query: 363 KSGWALAVE 389
           KSGW+ A+E
Sbjct: 233 KSGWSSAME 241



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/123 (29%), Positives = 58/123 (47%)
 Frame = +3

Query: 3   SLIDMYGKCVSPFSANRVFEDMGLQNEVSRCSLLFAYVNADEINAARSVFDTMPKRVNIA 182
           S++  Y K      A +VF   G  N+VS  +++ A++   +   A   F   P+R  ++
Sbjct: 245 SMLSFYAKLECQDDAMKVFNSFGCFNQVSWNAIIDAHMKLGDTQKAFLAFQKAPERNIVS 304

Query: 183 WNTMIAGSARLGYIELCFSLFKKMLENSCGPDQWTFSALMSGCGEAREFRYGCVVHALIV 362
           W +MIAG  R G  EL  S+F  +  NS   D     A++  C       +G +VH  I+
Sbjct: 305 WTSMIAGYTRNGNGELALSMFLDLTRNSVQLDDLVAGAVLHACASLAILVHGRMVHGCII 364

Query: 363 KSG 371
           + G
Sbjct: 365 RHG 367



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
 Frame = +3

Query: 102 LFAYVNADEINAARSVFDTMPKRVNIAWNTMIAGSARLGYIELCFSLFKKMLENSCGPDQ 281
           + A   + +I+ AR +FD +P + ++AWN M+   + +G  +   SLF  M  +   PD 
Sbjct: 12  IVALARSGQISDARKLFDEIPHKDSVAWNAMLTAYSHVGLYQQSLSLFGCMRISHSKPDN 71

Query: 282 WTFSALMS--GCGEAREFRYGCVVHALIVKSGW 374
           ++FSA+++   C  A   R+G  +HAL+V SG+
Sbjct: 72  FSFSAVLNACACAGASYVRFGATLHALVVVSGY 104