BLASTX nr result

ID: Panax21_contig00017909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017909
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285894.1| PREDICTED: TOM1-like protein 2-like [Vitis v...   107   3e-21
ref|XP_002520270.1| protein transporter, putative [Ricinus commu...    89   1e-15
ref|XP_002307466.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-14
gb|AFK38881.1| unknown [Lotus japonicus]                               82   9e-14
ref|XP_003541937.1| PREDICTED: TOM1-like protein 2-like [Glycine...    82   1e-13

>ref|XP_002285894.1| PREDICTED: TOM1-like protein 2-like [Vitis vinifera]
          Length = 514

 Score =  107 bits (267), Expect = 3e-21
 Identities = 73/168 (43%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
 Frame = +1

Query: 4   AATTHINNTNSTATLPAKLSSPPPSDEFINPTASDEFLNPTASDEFLNPTASMFSEKQPK 183
           A  +H N+TNST+     LSS  P   FINPTAS  F                     P 
Sbjct: 365 AVPSHSNSTNSTSPWTPALSSSSPPSHFINPTASPMFT------------------AHPV 406

Query: 184 YSEPAPTTKSIDRLXXXXXXXXXXXXXXX--SKHSQRTQFFKQNHVGAPNSTSGPGSSYD 357
           Y EPAP +KS D L                 SK++QR QFF+Q H    +  S  GSS D
Sbjct: 407 YDEPAPMSKSADPLPSAPWDAPSPNSIPPPPSKYNQRQQFFEQQHASLGSPYSSSGSSSD 466

Query: 358 SLVRQXXXXXXXXXXXKKQEKSEDALFRDLVDFAKAKSSSSN-PNRSF 498
           SLV Q            KQ K EDALF+DLVDFAKAKSSSS+ PNRSF
Sbjct: 467 SLVGQTQNLSINSSSTTKQVKQEDALFKDLVDFAKAKSSSSSKPNRSF 514


>ref|XP_002520270.1| protein transporter, putative [Ricinus communis]
           gi|223540489|gb|EEF42056.1| protein transporter,
           putative [Ricinus communis]
          Length = 520

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 64/156 (41%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
 Frame = +1

Query: 49  PAKLSSPPPSDEFINPTASDEFLNPTASDEFLNPTASMFSEKQPKYSEPAPTTKSIDRLX 228
           P   + P  S++  +P  S      +   + +N  +S     QP+Y EPAP  KS D L 
Sbjct: 367 PTPFTVPIHSNKNSSPPYSPTLSASSPPSQAVN--SSPLFTGQPEYDEPAPLRKSADGLP 424

Query: 229 XXXXXXXXXXXXXX--SKHSQRTQFFKQNH---VGAPNSTSGPGSSYDSLVRQXXXXXXX 393
                           S+++QR QFF+Q H    GA +S+SG  SSYDSLV Q       
Sbjct: 425 PAPWDTPSSVSLPPPPSRYNQRQQFFEQQHGFTPGASHSSSGSSSSYDSLVGQTQNLSLN 484

Query: 394 XXXXKKQEKSEDALFRDLVDFAKAKSSS-SNPNRSF 498
                KQ K EDALF+DLVDFAKAKSSS S  NRSF
Sbjct: 485 SSTPTKQTKPEDALFKDLVDFAKAKSSSPSKSNRSF 520


>ref|XP_002307466.1| predicted protein [Populus trichocarpa] gi|222856915|gb|EEE94462.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 56/114 (49%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
 Frame = +1

Query: 178 PKYSEPAPTTKSIDRLXXXXXXXXXXXXXXX--SKHSQRTQFFKQNHV---GAPNSTSGP 342
           P Y EPAP ++S DRL                 S+++QR QFF Q+H    GA NS+SG 
Sbjct: 380 PVYDEPAPLSQSGDRLPPAPWDVQSPGFLPPPPSRYNQRQQFFGQHHSVPGGASNSSSGS 439

Query: 343 GSSYDSLVRQXXXXXXXXXXXKKQEKSEDALFRDLVDFAKAKSSS-SNP-NRSF 498
           GSSYDSLV Q            KQ + EDALF+DLVDFA++KSSS S P NRSF
Sbjct: 440 GSSYDSLVGQTQSLSLNPSTPPKQARKEDALFKDLVDFARSKSSSPSKPNNRSF 493


>gb|AFK38881.1| unknown [Lotus japonicus]
          Length = 293

 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 53/125 (42%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
 Frame = +1

Query: 133 DEFLNPTASMFSEKQPKYSEPAPTTKSIDRLXXXXXXXXXXXXXXX--SKHSQRTQFFKQ 306
           D  LNPTAS+   KQP Y EP P  K  + L                 SKH+QR QFF+Q
Sbjct: 171 DSSLNPTASLIFNKQPVYDEPFPMNKFSEHLPPAPWDTPSPVVIPPPPSKHNQRQQFFEQ 230

Query: 307 NHVGAPNSTSGPGSSYDSLVRQXXXXXXXXXXXKKQEKSEDALFRDLVDFAKAKS-SSSN 483
           +  G  + ++G  SS D LV Q            KQ+K EDALF+D VDFAK+K+ S S 
Sbjct: 231 H--GGFHFSNGSSSSSDGLVGQTQNLFLNSSTPPKQQKPEDALFKDFVDFAKSKTFSFSR 288

Query: 484 PNRSF 498
           PN S+
Sbjct: 289 PNSSY 293


>ref|XP_003541937.1| PREDICTED: TOM1-like protein 2-like [Glycine max]
          Length = 508

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 62/168 (36%), Positives = 76/168 (45%), Gaps = 3/168 (1%)
 Frame = +1

Query: 4   AATTHINNTNSTATLPAKLSSPPPSDEFINPTASDEFLNPTASDEFLNPTASMFSEKQPK 183
           A   H + TN  +T     SSPP S                        T S    KQP 
Sbjct: 365 AVPLHSSPTNPASTAATLSSSPPYSPS----------------------TPSRILSKQPV 402

Query: 184 YSEPAPTTKSIDRLXXXXXXXXXXXXXXX--SKHSQRTQFFKQNHVGAPNSTSGPGSSYD 357
           Y EP P  KS + L                 S ++QR QFF+Q   G P+S+SG  S+ D
Sbjct: 403 YDEPPPINKSSESLPLSPLETQSPGFLLPPPSSYNQRQQFFEQQ--GVPHSSSGFSSADD 460

Query: 358 SLVRQXXXXXXXXXXXKKQEKSEDALFRDLVDFAKAK-SSSSNPNRSF 498
           SL+ Q            KQEK+ED LF+DLVDFAK+K SSSS P+R F
Sbjct: 461 SLLAQTQNLSLNSSTPTKQEKTEDVLFKDLVDFAKSKTSSSSKPSRPF 508


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