BLASTX nr result

ID: Panax21_contig00017901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017901
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   197   7e-49
ref|XP_003550222.1| PREDICTED: uncharacterized protein LOC100796...   195   3e-48
ref|XP_003544580.1| PREDICTED: uncharacterized protein LOC100799...   195   4e-48
ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   189   2e-46
emb|CBI20737.3| unnamed protein product [Vitis vinifera]              189   2e-46

>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  197 bits (501), Expect = 7e-49
 Identities = 101/134 (75%), Positives = 111/134 (82%), Gaps = 7/134 (5%)
 Frame = +3

Query: 3   DSGIWKYDRNVSPDASVGSSQSSHVLASSYNGGQGR-------QGRNSARAAPVWVETGE 161
           DSGIWKY+RN S D++VGSS+SSHVLASSY+ G GR       Q R SARAAPVW+ETGE
Sbjct: 357 DSGIWKYERNGSADSAVGSSRSSHVLASSYSSGNGRGIYSERAQNRGSARAAPVWLETGE 416

Query: 162 AVANMYSETREDARDHARLRNAYFEQARQAYFIGNKSLAKELSEKGQLHNMQMKAAHAKA 341
           AVANMYSE RE+ARDHARLRNAYFEQARQAY IGNK+LAKELS KGQLHNM MKAAH KA
Sbjct: 417 AVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKA 476

Query: 342 QESIYRQSSRFCNE 383
           QESIYR  +   +E
Sbjct: 477 QESIYRLRNPISSE 490


>ref|XP_003550222.1| PREDICTED: uncharacterized protein LOC100796128 isoform 1 [Glycine
           max] gi|356563956|ref|XP_003550223.1| PREDICTED:
           uncharacterized protein LOC100796128 isoform 2 [Glycine
           max]
          Length = 573

 Score =  195 bits (496), Expect = 3e-48
 Identities = 99/127 (77%), Positives = 107/127 (84%), Gaps = 7/127 (5%)
 Frame = +3

Query: 3   DSGIWKYDRNVSPDASVGSSQSSHVLASSYNGGQGR-------QGRNSARAAPVWVETGE 161
           DSGIWKYD+N S DAS GSS+  + LAS+YNGGQGR       Q R SARAAPVW+ETG+
Sbjct: 349 DSGIWKYDKNGSGDASTGSSRGLNALASAYNGGQGRVNIGDRLQSRGSARAAPVWLETGD 408

Query: 162 AVANMYSETREDARDHARLRNAYFEQARQAYFIGNKSLAKELSEKGQLHNMQMKAAHAKA 341
           AVANMYSE RE+ARDHARLRNAYFEQARQAY IGNK+LAKELS KGQLHNM MKAAH KA
Sbjct: 409 AVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKA 468

Query: 342 QESIYRQ 362
           QESIYRQ
Sbjct: 469 QESIYRQ 475


>ref|XP_003544580.1| PREDICTED: uncharacterized protein LOC100799961 [Glycine max]
          Length = 572

 Score =  195 bits (495), Expect = 4e-48
 Identities = 98/127 (77%), Positives = 108/127 (85%), Gaps = 7/127 (5%)
 Frame = +3

Query: 3   DSGIWKYDRNVSPDASVGSSQSSHVLASSYNGGQGR-------QGRNSARAAPVWVETGE 161
           DSGIWKYD+N S DAS GSS+S + LAS+YNGGQGR       Q R SARAAPVW+ETG+
Sbjct: 349 DSGIWKYDKNGSGDASTGSSRSLNALASAYNGGQGRVNNGDRLQNRGSARAAPVWLETGD 408

Query: 162 AVANMYSETREDARDHARLRNAYFEQARQAYFIGNKSLAKELSEKGQLHNMQMKAAHAKA 341
           AVANMYSE RE+ARDHARLRNAYFEQARQAY +GNK+LAKELS KGQLHN+ MKAAH KA
Sbjct: 409 AVANMYSELREEARDHARLRNAYFEQARQAYLVGNKALAKELSVKGQLHNVHMKAAHGKA 468

Query: 342 QESIYRQ 362
           QESIYRQ
Sbjct: 469 QESIYRQ 475


>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 1580

 Score =  189 bits (480), Expect = 2e-46
 Identities = 95/127 (74%), Positives = 106/127 (83%), Gaps = 7/127 (5%)
 Frame = +3

Query: 3   DSGIWKYDRNVSPDASVGSSQSSHVLASSYNGGQGR-------QGRNSARAAPVWVETGE 161
           DSGIWK+DRN + D +VGSS+SSHVLASSYN G GR       Q R SAR AP WVETGE
Sbjct: 349 DSGIWKFDRNGTADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGE 408

Query: 162 AVANMYSETREDARDHARLRNAYFEQARQAYFIGNKSLAKELSEKGQLHNMQMKAAHAKA 341
           AVANMYSE RE+ARDHARLRNAYFEQA+QAY IGNK+LAKELS KG+LH++ MKAAH KA
Sbjct: 409 AVANMYSELREEARDHARLRNAYFEQAQQAYLIGNKALAKELSLKGKLHSIHMKAAHGKA 468

Query: 342 QESIYRQ 362
           QE+IYRQ
Sbjct: 469 QEAIYRQ 475


>emb|CBI20737.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  189 bits (480), Expect = 2e-46
 Identities = 95/127 (74%), Positives = 106/127 (83%), Gaps = 7/127 (5%)
 Frame = +3

Query: 3   DSGIWKYDRNVSPDASVGSSQSSHVLASSYNGGQGR-------QGRNSARAAPVWVETGE 161
           DSGIWK+DRN + D +VGSS+SSHVLASSYN G GR       Q R SAR AP WVETGE
Sbjct: 298 DSGIWKFDRNGTADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGE 357

Query: 162 AVANMYSETREDARDHARLRNAYFEQARQAYFIGNKSLAKELSEKGQLHNMQMKAAHAKA 341
           AVANMYSE RE+ARDHARLRNAYFEQA+QAY IGNK+LAKELS KG+LH++ MKAAH KA
Sbjct: 358 AVANMYSELREEARDHARLRNAYFEQAQQAYLIGNKALAKELSLKGKLHSIHMKAAHGKA 417

Query: 342 QESIYRQ 362
           QE+IYRQ
Sbjct: 418 QEAIYRQ 424


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