BLASTX nr result

ID: Panax21_contig00017885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017885
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523648.1| steroid binding protein, putative [Ricinus c...   207   1e-51
ref|XP_002321821.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|XP_003548200.1| PREDICTED: membrane steroid-binding protein ...   182   3e-44
ref|XP_002510808.1| steroid binding protein, putative [Ricinus c...   181   1e-43
ref|XP_003553837.1| PREDICTED: membrane steroid-binding protein ...   180   2e-43

>ref|XP_002523648.1| steroid binding protein, putative [Ricinus communis]
           gi|223537100|gb|EEF38734.1| steroid binding protein,
           putative [Ricinus communis]
          Length = 197

 Score =  207 bits (526), Expect = 1e-51
 Identities = 108/152 (71%), Positives = 122/152 (80%), Gaps = 8/152 (5%)
 Frame = -2

Query: 434 IGALTVVVYKVVCGMFVAADDYMAVKRSNDFV-------IREPVQLGE-VTEEELRVYDG 279
           I AL VVVYK+VC MFV  ++    K SN+ +       I EPVQLG+ VTE+ELR YDG
Sbjct: 25  IAALMVVVYKMVCSMFVDPEELHNHKLSNNHINDQTTPRILEPVQLGDYVTEQELRAYDG 84

Query: 278 SDPNKPLLMAIKGQIYDVSRSRMFYGTGGPYALFAGRDASQALALMSFDPQDLTGNIDGL 99
           SDP+KPLLMAIKGQIYDVS SRMFYG GGPYA FAGRDAS+ALAL+SFDP+DLTGN++GL
Sbjct: 85  SDPSKPLLMAIKGQIYDVSSSRMFYGPGGPYAKFAGRDASRALALLSFDPKDLTGNLEGL 144

Query: 98  SSSELEALQDWEYKFTEKYVKVGQLVKEKLKT 3
           S SELE LQDWEYKF EKYVKVGQLV E  +T
Sbjct: 145 SESELEVLQDWEYKFMEKYVKVGQLVSEHTRT 176


>ref|XP_002321821.1| predicted protein [Populus trichocarpa] gi|222868817|gb|EEF05948.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  204 bits (519), Expect = 8e-51
 Identities = 103/144 (71%), Positives = 116/144 (80%), Gaps = 6/144 (4%)
 Frame = -2

Query: 434 IGALTVVVYKVVCGMFVAADDYMAVK------RSNDFVIREPVQLGEVTEEELRVYDGSD 273
           I A+ VVVYK+VC MFV  +D    +      +     I+EPVQLG+VTEEELR YDGSD
Sbjct: 18  IAAVMVVVYKIVCSMFVDPEDIATNQPPPPQPQPQPPTIQEPVQLGDVTEEELRAYDGSD 77

Query: 272 PNKPLLMAIKGQIYDVSRSRMFYGTGGPYALFAGRDASQALALMSFDPQDLTGNIDGLSS 93
           PNKPLLMAIKG+IYDVSRSRMFYG GGPYA FAGR+AS+ALALMSFDP+DL GN++GLS 
Sbjct: 78  PNKPLLMAIKGKIYDVSRSRMFYGPGGPYAFFAGREASRALALMSFDPRDLNGNLEGLSE 137

Query: 92  SELEALQDWEYKFTEKYVKVGQLV 21
            ELE LQDWEYKF EKYVKVGQLV
Sbjct: 138 PELEVLQDWEYKFMEKYVKVGQLV 161


>ref|XP_003548200.1| PREDICTED: membrane steroid-binding protein 2-like [Glycine max]
          Length = 222

 Score =  182 bits (463), Expect = 3e-44
 Identities = 93/142 (65%), Positives = 110/142 (77%), Gaps = 5/142 (3%)
 Frame = -2

Query: 428 ALTVVVYKVVCGMFVAADDYMAVKRSNDFV-----IREPVQLGEVTEEELRVYDGSDPNK 264
           AL + +Y VV G+F ++ D+     S DF      +R PVQ+GEVTEEEL+ YDGSDP K
Sbjct: 29  ALILALYYVVSGLFPSSSDHRHNTASRDFEPQMEPLRPPVQIGEVTEEELKAYDGSDPEK 88

Query: 263 PLLMAIKGQIYDVSRSRMFYGTGGPYALFAGRDASQALALMSFDPQDLTGNIDGLSSSEL 84
           PLLMAIKGQIYDVS+SRMFYG GGPYALFAG+DAS+ALA MSF+ +DLTG+I GL   E+
Sbjct: 89  PLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFEV 148

Query: 83  EALQDWEYKFTEKYVKVGQLVK 18
           EALQDWEYKF  KYVKVG + K
Sbjct: 149 EALQDWEYKFMGKYVKVGTVKK 170


>ref|XP_002510808.1| steroid binding protein, putative [Ricinus communis]
           gi|223549923|gb|EEF51410.1| steroid binding protein,
           putative [Ricinus communis]
          Length = 242

 Score =  181 bits (458), Expect = 1e-43
 Identities = 94/140 (67%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
 Frame = -2

Query: 428 ALTVVVYKVVCGMFVAADDYMAVKRSNDFVIRE---PVQLGEVTEEELRVYDGSDPNKPL 258
           AL + VY V+ GMF ++D +    RS +  ++    PVQLGEVTEEEL+ YDGSDP KPL
Sbjct: 31  ALGLAVYYVISGMFGSSDTHHQRPRSFEEQMQPLPPPVQLGEVTEEELKQYDGSDPKKPL 90

Query: 257 LMAIKGQIYDVSRSRMFYGTGGPYALFAGRDASQALALMSFDPQDLTGNIDGLSSSELEA 78
           LMAIKGQIYDVS+SRMFYG GGPYALFAG+DAS+ALA MSF+ +DLTG+I GL   ELEA
Sbjct: 91  LMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDKDLTGDISGLGPFELEA 150

Query: 77  LQDWEYKFTEKYVKVGQLVK 18
           LQDWEYKF  KYVKVG + K
Sbjct: 151 LQDWEYKFMSKYVKVGTIKK 170


>ref|XP_003553837.1| PREDICTED: membrane steroid-binding protein 2-like [Glycine max]
          Length = 200

 Score =  180 bits (456), Expect = 2e-43
 Identities = 89/148 (60%), Positives = 111/148 (75%), Gaps = 9/148 (6%)
 Frame = -2

Query: 428 ALTVVVYKVVCGMFVAADDY----MAVKRSNDFVI-----REPVQLGEVTEEELRVYDGS 276
           A+ VVVY+ V GMFV+ +DY    +   R+N  +      REPVQLGE+T+ ELR YDGS
Sbjct: 27  AMMVVVYRTVSGMFVSPEDYNKPPVVSARANSRLDESEPPREPVQLGEITDRELRAYDGS 86

Query: 275 DPNKPLLMAIKGQIYDVSRSRMFYGTGGPYALFAGRDASQALALMSFDPQDLTGNIDGLS 96
           DP+KPLLMAIKGQIYDVS  R FYG GGPYA+FAG++ S+ALAL+SF P D+ GN++GL 
Sbjct: 87  DPSKPLLMAIKGQIYDVSNGRNFYGPGGPYAMFAGKECSRALALLSFKPDDINGNLEGLG 146

Query: 95  SSELEALQDWEYKFTEKYVKVGQLVKEK 12
             EL  L+DWE+KF EKY KVGQL+ E+
Sbjct: 147 EEELTILEDWEFKFIEKYPKVGQLIAEQ 174


Top