BLASTX nr result

ID: Panax21_contig00017876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017876
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vi...   342   1e-91
ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus ...   334   2e-89
ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cuc...   333   5e-89
ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|2...   322   1e-85
ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata sub...   320   5e-85

>ref|XP_002282881.1| PREDICTED: F-box protein At5g67140 [Vitis vinifera]
           gi|296082395|emb|CBI21400.3| unnamed protein product
           [Vitis vinifera]
          Length = 232

 Score =  342 bits (876), Expect = 1e-91
 Identities = 168/224 (75%), Positives = 191/224 (85%)
 Frame = +3

Query: 177 EAPEIEGLPIDILAHIFLFLSCFKDLAHASSVCKKWKEGVKQSLGRREALSFAGWKMDDD 356
           E  EIE LP+D+LA+IF+ L+ F DLA ASSVC+KWK+GVKQSLGRRE+LSFAGW+MDDD
Sbjct: 8   EEAEIERLPMDLLANIFVMLTSFTDLAQASSVCRKWKQGVKQSLGRRESLSFAGWQMDDD 67

Query: 357 STARLLVHAYSLKELDISKSRWGCHVTDNGLYQISLAKCVTNLSSISLWGMTGISDEGVV 536
           S ARLL HAY LKELDIS+SRWGC VTDNGLY+ISLAKCV  L+SISLWG+TGI+D GVV
Sbjct: 68  SIARLLRHAYGLKELDISRSRWGCQVTDNGLYKISLAKCVNKLTSISLWGVTGITDSGVV 127

Query: 537 QLVSRATSLQHLNIGGTFITDESLFAIANSCKHLKSINLWCCRHVTESGLLVLVNKCHKL 716
           QL+SRA SLQHLNIGGTFITDESLFAIA SC  LK+I LW CRHVTE+GLLVLV+KC KL
Sbjct: 128 QLISRAISLQHLNIGGTFITDESLFAIAESCPCLKTIVLWSCRHVTENGLLVLVSKCRKL 187

Query: 717 ESINVWGMRVPLNCFIGLVNISPALHIQPEGLLPIVESVSTWPV 848
           +SINVWG RVP++CF  L+ I PAL I+P  LL  VE VS WPV
Sbjct: 188 QSINVWGTRVPVDCFFALLAIRPALQIKPGRLLLNVERVSMWPV 231


>ref|XP_002523621.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223537183|gb|EEF38816.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 227

 Score =  334 bits (857), Expect = 2e-89
 Identities = 160/224 (71%), Positives = 191/224 (85%)
 Frame = +3

Query: 177 EAPEIEGLPIDILAHIFLFLSCFKDLAHASSVCKKWKEGVKQSLGRREALSFAGWKMDDD 356
           E  EI+ LPID+LAHIF+ ++ F DLAHASSVC+KWKEGVK+SLGRR +LSFAG KMDD 
Sbjct: 3   EGTEIDRLPIDLLAHIFVLINSFTDLAHASSVCRKWKEGVKRSLGRRNSLSFAGLKMDDH 62

Query: 357 STARLLVHAYSLKELDISKSRWGCHVTDNGLYQISLAKCVTNLSSISLWGMTGISDEGVV 536
           STAR++ +AYSLKELDIS+SRWGC +TDNGLY+ISLAKC++NL+SISLWGMTGI+D+GVV
Sbjct: 63  STARVVRYAYSLKELDISRSRWGCQITDNGLYEISLAKCISNLTSISLWGMTGITDKGVV 122

Query: 537 QLVSRATSLQHLNIGGTFITDESLFAIANSCKHLKSINLWCCRHVTESGLLVLVNKCHKL 716
           QL+SRA SLQHLN+GGTFITDESL AIA+SC HLKSI LW CRHVTE GL+ LVNKC KL
Sbjct: 123 QLMSRANSLQHLNVGGTFITDESLCAIADSCPHLKSIGLWSCRHVTEIGLIYLVNKCRKL 182

Query: 717 ESINVWGMRVPLNCFIGLVNISPALHIQPEGLLPIVESVSTWPV 848
           ESIN WG RVP++CF+ L+ +SPAL I+  G L  + + S  PV
Sbjct: 183 ESINAWGTRVPIDCFLCLLTVSPALRIKHGGFLLNIGNASMLPV 226


>ref|XP_004149695.1| PREDICTED: F-box protein At5g67140-like [Cucumis sativus]
           gi|449508293|ref|XP_004163274.1| PREDICTED: F-box
           protein At5g67140-like [Cucumis sativus]
          Length = 235

 Score =  333 bits (854), Expect = 5e-89
 Identities = 158/217 (72%), Positives = 190/217 (87%)
 Frame = +3

Query: 183 PEIEGLPIDILAHIFLFLSCFKDLAHASSVCKKWKEGVKQSLGRREALSFAGWKMDDDST 362
           PEI+ LPID+LAHIF  ++ F DLA A  VC+KWKEGVK SLGRR++LSFAGWKMDD+ST
Sbjct: 18  PEIDRLPIDLLAHIFAMITSFTDLAQACGVCRKWKEGVKLSLGRRKSLSFAGWKMDDNST 77

Query: 363 ARLLVHAYSLKELDISKSRWGCHVTDNGLYQISLAKCVTNLSSISLWGMTGISDEGVVQL 542
           ARL+ HAYSL+ELDIS+SRWGCH+TD+GLY+ISLAKC+ NL SISLWGM GI+D+GVVQL
Sbjct: 78  ARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKCIPNLKSISLWGMAGITDKGVVQL 137

Query: 543 VSRATSLQHLNIGGTFITDESLFAIANSCKHLKSINLWCCRHVTESGLLVLVNKCHKLES 722
           +SRA SLQ+LNIGGTF+TD SL+AIA+SC +LK+I LW CRHVTE+GLL+LV+KC KLES
Sbjct: 138 ISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLES 197

Query: 723 INVWGMRVPLNCFIGLVNISPALHIQPEGLLPIVESV 833
           INVWGMRVP++CFIGLV ISP+L I+   LL  + SV
Sbjct: 198 INVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWSV 234


>ref|XP_002306478.1| predicted protein [Populus trichocarpa] gi|222855927|gb|EEE93474.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  322 bits (824), Expect = 1e-85
 Identities = 158/226 (69%), Positives = 184/226 (81%)
 Frame = +3

Query: 171 KREAPEIEGLPIDILAHIFLFLSCFKDLAHASSVCKKWKEGVKQSLGRREALSFAGWKMD 350
           +RE  EI+ LPID++A+IF F+  F DLA ASSVC+KWKEGVKQSL +R ++SFAGWKMD
Sbjct: 2   EREEAEIDRLPIDLVAYIFGFIVSFTDLAQASSVCRKWKEGVKQSLAQRNSMSFAGWKMD 61

Query: 351 DDSTARLLVHAYSLKELDISKSRWGCHVTDNGLYQISLAKCVTNLSSISLWGMTGISDEG 530
           D ST RL+  AY+LKELDIS+SRW C +TDNGLYQISLA C+ NL+SISLWGM  I+D G
Sbjct: 62  DVSTTRLVRLAYNLKELDISRSRWDCQITDNGLYQISLANCIGNLTSISLWGMARITDRG 121

Query: 531 VVQLVSRATSLQHLNIGGTFITDESLFAIANSCKHLKSINLWCCRHVTESGLLVLVNKCH 710
           VVQL+SRA SLQHLNIGGTF+TDESLFAIA+SC  LKSI LW CRHVTE GLL L NKC 
Sbjct: 122 VVQLISRANSLQHLNIGGTFVTDESLFAIADSCPRLKSIVLWSCRHVTEIGLLNLANKCR 181

Query: 711 KLESINVWGMRVPLNCFIGLVNISPALHIQPEGLLPIVESVSTWPV 848
           KLESINVWG RVP+NCFI L+ ISP+L I+P G+L  V   +  PV
Sbjct: 182 KLESINVWGTRVPVNCFIDLLTISPSLQIKPPGVLLNVGGAAILPV 227


>ref|XP_002865025.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310860|gb|EFH41284.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  320 bits (819), Expect = 5e-85
 Identities = 150/213 (70%), Positives = 180/213 (84%)
 Frame = +3

Query: 177 EAPEIEGLPIDILAHIFLFLSCFKDLAHASSVCKKWKEGVKQSLGRREALSFAGWKMDDD 356
           E   I+ LP+D+LA+IF  ++ F  L  AS VCKKW++ V QS+ RRE+LSFAGWKMDDD
Sbjct: 3   EEAAIDRLPLDLLAYIFSLVTSFTVLGQASGVCKKWRKAVNQSMARRESLSFAGWKMDDD 62

Query: 357 STARLLVHAYSLKELDISKSRWGCHVTDNGLYQISLAKCVTNLSSISLWGMTGISDEGVV 536
           ST+RL+  AY+LKELDIS+SRWGCH+TDNGLYQI+ A+CV+NL+S+SLWGMT I+D GVV
Sbjct: 63  STSRLVHLAYNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLWGMTAITDSGVV 122

Query: 537 QLVSRATSLQHLNIGGTFITDESLFAIANSCKHLKSINLWCCRHVTESGLLVLVNKCHKL 716
           QL+SR +SLQHLNIGGTFITDESLFAIA  C HLK+I +WCCRHVTE GLLVLVNKC KL
Sbjct: 123 QLISRTSSLQHLNIGGTFITDESLFAIAERCHHLKTIGMWCCRHVTERGLLVLVNKCGKL 182

Query: 717 ESINVWGMRVPLNCFIGLVNISPALHIQPEGLL 815
           ESIN+WG RVP++CFI L+ ISPAL I+P  LL
Sbjct: 183 ESINLWGTRVPVDCFIALLTISPALQIKPMELL 215


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