BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017870
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873722.1| U-box domain-containing protein [Arabidopsis...   113   1e-23
gb|ABG89128.1| UFD2 [synthetic construct]                             113   1e-23
ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabi...   113   1e-23
ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation fa...   112   4e-23
ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation fa...   106   2e-21

>ref|XP_002873722.1| U-box domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319559|gb|EFH49981.1| U-box domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1038

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/73 (80%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MATSKPQRSLAEIEDIIIRKIFLVSLVDSMENDSRIVYLEMTAAEILSEGKDLRLSRDLM 42
           MATSKPQRS AEIEDII+RKIF V+L +S ++D RIVYLEMTAAEILSEGK+L LSRDLM
Sbjct: 1   MATSKPQRSPAEIEDIILRKIFYVTLTESADSDPRIVYLEMTAAEILSEGKELLLSRDLM 60

Query: 41  ERVLIDRLSGNFT 3
           ERVLIDRLSG+F+
Sbjct: 61  ERVLIDRLSGDFS 73


>gb|ABG89128.1| UFD2 [synthetic construct]
          Length = 1037

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/73 (80%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MATSKPQRSLAEIEDIIIRKIFLVSLVDSMENDSRIVYLEMTAAEILSEGKDLRLSRDLM 42
           MATSKPQRS AEIEDII+RKIF V+L +S ++D RIVYLEMTAAEILSEGK+L LSRDLM
Sbjct: 1   MATSKPQRSPAEIEDIILRKIFYVTLTESTDSDPRIVYLEMTAAEILSEGKELLLSRDLM 60

Query: 41  ERVLIDRLSGNFT 3
           ERVLIDRLSG+F+
Sbjct: 61  ERVLIDRLSGDFS 73


>ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabidopsis thaliana]
           gi|75174048|sp|Q9LF41.1|UBE4_ARATH RecName:
           Full=Probable ubiquitin conjugation factor E4; AltName:
           Full=Plant U-box protein 1; AltName: Full=U-box
           domain-containing protein 1; AltName:
           Full=Ubiquitin-fusion degradation protein 2-like;
           Short=UB fusion protein 2-like
           gi|9755795|emb|CAC01739.1| ubiquitin-fusion degradation
           protein-like [Arabidopsis thaliana]
           gi|332004773|gb|AED92156.1| putative ubiquitin
           conjugation factor E4 [Arabidopsis thaliana]
          Length = 1038

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/73 (80%), Positives = 67/73 (91%)
 Frame = -2

Query: 221 MATSKPQRSLAEIEDIIIRKIFLVSLVDSMENDSRIVYLEMTAAEILSEGKDLRLSRDLM 42
           MATSKPQRS AEIEDII+RKIF V+L +S ++D RIVYLEMTAAEILSEGK+L LSRDLM
Sbjct: 1   MATSKPQRSPAEIEDIILRKIFYVTLTESTDSDPRIVYLEMTAAEILSEGKELLLSRDLM 60

Query: 41  ERVLIDRLSGNFT 3
           ERVLIDRLSG+F+
Sbjct: 61  ERVLIDRLSGDFS 73


>ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Vitis
           vinifera] gi|296082973|emb|CBI22274.3| unnamed protein
           product [Vitis vinifera]
          Length = 1037

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/72 (83%), Positives = 65/72 (90%)
 Frame = -2

Query: 221 MATSKPQRSLAEIEDIIIRKIFLVSLVDSMENDSRIVYLEMTAAEILSEGKDLRLSRDLM 42
           MAT KPQ S  EIEDII+ KIFLVSL DSME+DSRIVYLEMTAAEILSEG+ L+LSRDLM
Sbjct: 1   MATKKPQLSPDEIEDIILGKIFLVSLNDSMESDSRIVYLEMTAAEILSEGRPLKLSRDLM 60

Query: 41  ERVLIDRLSGNF 6
           ERVLIDRLSG+F
Sbjct: 61  ERVLIDRLSGHF 72


>ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Cucumis
           sativus] gi|449494681|ref|XP_004159617.1| PREDICTED:
           probable ubiquitin conjugation factor E4-like [Cucumis
           sativus]
          Length = 1043

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/71 (71%), Positives = 64/71 (90%)
 Frame = -2

Query: 221 MATSKPQRSLAEIEDIIIRKIFLVSLVDSMENDSRIVYLEMTAAEILSEGKDLRLSRDLM 42
           MATSKPQRS  E+EDII+RK+FL+SL D+ ++DSRIVYLE TAAE+LSEGK LR+SRD+M
Sbjct: 1   MATSKPQRSPEEVEDIILRKVFLISLTDTSDSDSRIVYLEQTAAELLSEGKPLRISRDVM 60

Query: 41  ERVLIDRLSGN 9
           ER++IDRLS +
Sbjct: 61  ERIIIDRLSAH 71