BLASTX nr result

ID: Panax21_contig00017869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017869
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containi...   178   4e-43
ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ...   178   5e-43
emb|CBI30135.3| unnamed protein product [Vitis vinifera]              177   6e-43

>ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|222854864|gb|EEE92411.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/135 (64%), Positives = 111/135 (82%)
 Frame = +1

Query: 1   AIMASPALSVRSVLEKWVEEGNDVSKTQIFMVIVNLRKRRMYGRGLQVSEWLESSKRLDF 180
           AI+++  +SV+SVL+KWV EG D+ + +I   ++NLRKRRM+GR LQ+SEW E++K  +F
Sbjct: 94  AIVSASDVSVQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQLSEWFEANKPQEF 153

Query: 181 SEREYASRLDLIAKVWGLQKAESYIKMIPQSYRGEIIYRTFLANCVASLNVKKAEEVFNK 360
            ER+YASRLDLIAKV GL KAE YI  IP+S++GE+IYRT LANCV   NVKKAEEVFNK
Sbjct: 154 VERDYASRLDLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNK 213

Query: 361 MKDLQFPVTAFACNQ 405
           M+DL+FP+T FACNQ
Sbjct: 214 MRDLEFPITPFACNQ 228


>ref|XP_002322619.1| predicted protein [Populus trichocarpa] gi|222867249|gb|EEF04380.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/135 (63%), Positives = 111/135 (82%)
 Frame = +1

Query: 1   AIMASPALSVRSVLEKWVEEGNDVSKTQIFMVIVNLRKRRMYGRGLQVSEWLESSKRLDF 180
           AI+++P +SV SVL+KWV EG D+ + +I   + NLRKRR++GR LQ+SEW+E++KR DF
Sbjct: 11  AIISAPGVSVHSVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWVEANKRKDF 70

Query: 181 SEREYASRLDLIAKVWGLQKAESYIKMIPQSYRGEIIYRTFLANCVASLNVKKAEEVFNK 360
            ER+YASRLDLIAKV GLQKAE YI+ IP+S +GE+IYRT LANCV++ N KKA EVFNK
Sbjct: 71  DERDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNK 130

Query: 361 MKDLQFPVTAFACNQ 405
           MKDL+ P+T F+ NQ
Sbjct: 131 MKDLELPITLFSYNQ 145


>ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
           mitochondrial-like [Cucumis sativus]
          Length = 613

 Score =  178 bits (452), Expect = 4e-43
 Identities = 83/134 (61%), Positives = 109/134 (81%)
 Frame = +1

Query: 4   IMASPALSVRSVLEKWVEEGNDVSKTQIFMVIVNLRKRRMYGRGLQVSEWLESSKRLDFS 183
           I  +P L+V S L+KWV EG ++S+  I   ++NLRK RMYG+ LQ SEWLE++ +LDF 
Sbjct: 152 IWKAPGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFV 211

Query: 184 EREYASRLDLIAKVWGLQKAESYIKMIPQSYRGEIIYRTFLANCVASLNVKKAEEVFNKM 363
           E++YASRLDLI K+ GL+ AE+YI  IP+S++GE++YRT LANCV + NV+KAEEVFNKM
Sbjct: 212 EKDYASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKM 271

Query: 364 KDLQFPVTAFACNQ 405
           KDL+FP+TAFACNQ
Sbjct: 272 KDLEFPITAFACNQ 285


>ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500005|gb|AES81208.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  178 bits (451), Expect = 5e-43
 Identities = 83/135 (61%), Positives = 110/135 (81%)
 Frame = +1

Query: 1   AIMASPALSVRSVLEKWVEEGNDVSKTQIFMVIVNLRKRRMYGRGLQVSEWLESSKRLDF 180
           AIM     ++ + LEKWVE+G ++S+ +I + ++NLR+R++Y + LQ+SEWLES K L+F
Sbjct: 163 AIMNGTGPTIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEF 222

Query: 181 SEREYASRLDLIAKVWGLQKAESYIKMIPQSYRGEIIYRTFLANCVASLNVKKAEEVFNK 360
            ER+YAS+LDLIAK+ GL KAE YI+ IP+S+RGEIIYRT LANCV   N+KKAEE+FNK
Sbjct: 223 VERDYASQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNK 282

Query: 361 MKDLQFPVTAFACNQ 405
           MKDL+FP+T FACNQ
Sbjct: 283 MKDLEFPLTPFACNQ 297


>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  177 bits (450), Expect = 6e-43
 Identities = 85/135 (62%), Positives = 107/135 (79%)
 Frame = +1

Query: 1   AIMASPALSVRSVLEKWVEEGNDVSKTQIFMVIVNLRKRRMYGRGLQVSEWLESSKRLDF 180
           AIMA+    + SVL KW +EG D+S+ +I   ++NLRK RM+ + LQ SEW+E  K+LD 
Sbjct: 163 AIMAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDM 222

Query: 181 SEREYASRLDLIAKVWGLQKAESYIKMIPQSYRGEIIYRTFLANCVASLNVKKAEEVFNK 360
            ER+YASR+DLIAKV GLQKAE YI+ IP+S+RGE++YRT LANCV++ N KKAEEVFNK
Sbjct: 223 VERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNK 282

Query: 361 MKDLQFPVTAFACNQ 405
           MKDL FP+T FACNQ
Sbjct: 283 MKDLGFPITTFACNQ 297


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