BLASTX nr result

ID: Panax21_contig00017858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017858
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516567.1| myb, putative [Ricinus communis] gi|22354438...   202   3e-50
ref|XP_002309557.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_002324814.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
dbj|BAB70511.1| Myb [Nicotiana tabacum]                               176   1e-42
ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vi...   175   4e-42

>ref|XP_002516567.1| myb, putative [Ricinus communis] gi|223544387|gb|EEF45908.1| myb,
            putative [Ricinus communis]
          Length = 1046

 Score =  202 bits (513), Expect = 3e-50
 Identities = 109/168 (64%), Positives = 122/168 (72%), Gaps = 14/168 (8%)
 Frame = +1

Query: 10   GAENLNIFGETPFKRSIDSPSAWKSPWFINSFVPGPRVXXXXXXXXXXXGYFMSPGDGKS 189
            G ENL+IFGETPFKRSI+SPSAWKSPWFINSF+PGPRV           GYFMSPGD +S
Sbjct: 882  GTENLSIFGETPFKRSIESPSAWKSPWFINSFLPGPRV--DTDISIEDIGYFMSPGD-RS 938

Query: 190  YDAIGLMKQLSEHTAAALADAKEVLGDETPDTILKNRCSSNEKEKAES------------ 333
            YDAI LMKQLSEHTA+A ADA EVLG+ETP+TIL+ R SS +    E+            
Sbjct: 939  YDAIALMKQLSEHTASAFADALEVLGNETPETILEKRRSSIQNMNQENNGATNSEPENHS 998

Query: 334  --TSNVLTERRVLDFSECDTPGKGTESRRFSTAMIFSSPSSYLLKACR 471
               SN+ TE R LDFSEC TPGKGTE  + STA+IFSSPSSYLLK CR
Sbjct: 999  HLASNISTECRTLDFSECGTPGKGTERGKSSTAIIFSSPSSYLLKGCR 1046


>ref|XP_002309557.1| predicted protein [Populus trichocarpa] gi|222855533|gb|EEE93080.1|
            predicted protein [Populus trichocarpa]
          Length = 1027

 Score =  193 bits (491), Expect = 1e-47
 Identities = 102/159 (64%), Positives = 117/159 (73%), Gaps = 5/159 (3%)
 Frame = +1

Query: 10   GAENLNIFGETPFKRSIDSPSAWKSPWFINSFVPGPRVXXXXXXXXXXXGYFMSPGDGKS 189
            G EN  IFG+TPFKRS +SPSAWKSPWFINSFVPGPR+           GYFMSPGD +S
Sbjct: 872  GTENFGIFGDTPFKRSFESPSAWKSPWFINSFVPGPRI--DTEISIEDIGYFMSPGD-RS 928

Query: 190  YDAIGLMKQLSEHTAAALADAKEVLGDETPDTILKNRCSSNEKEK-----AESTSNVLTE 354
            YDAI LMKQLSEHTA A ADA EV+G +TP++ILK R  SN+ +      +   SNV TE
Sbjct: 929  YDAIALMKQLSEHTAPAYADALEVMGKDTPESILKERRRSNDPDGDIENCSHLVSNVSTE 988

Query: 355  RRVLDFSECDTPGKGTESRRFSTAMIFSSPSSYLLKACR 471
             R LDFSEC TPGK TE+ + STA+ FSSPSSYLLK+CR
Sbjct: 989  CRTLDFSECGTPGKKTENGKSSTAISFSSPSSYLLKSCR 1027


>ref|XP_002324814.1| predicted protein [Populus trichocarpa] gi|222866248|gb|EEF03379.1|
            predicted protein [Populus trichocarpa]
          Length = 1027

 Score =  192 bits (489), Expect = 2e-47
 Identities = 101/159 (63%), Positives = 119/159 (74%), Gaps = 5/159 (3%)
 Frame = +1

Query: 10   GAENLNIFGETPFKRSIDSPSAWKSPWFINSFVPGPRVXXXXXXXXXXXGYFMSPGDGKS 189
            G  N  IFG+TPFKRSI+SPSAWKSPWFINSFVPGPR+           GYFMSPGD +S
Sbjct: 872  GTGNFGIFGDTPFKRSIESPSAWKSPWFINSFVPGPRI--DTEISIEDIGYFMSPGD-RS 928

Query: 190  YDAIGLMKQLSEHTAAALADAKEVLGDETPDTILKNRCSSN-----EKEKAESTSNVLTE 354
            YDAI LMKQLSEHTA+A ADA EVLG +TP+++LK R  SN     ++ ++   SNVLTE
Sbjct: 929  YDAIALMKQLSEHTASAYADALEVLGKDTPESMLKERRHSNDQNGDQENRSHLASNVLTE 988

Query: 355  RRVLDFSECDTPGKGTESRRFSTAMIFSSPSSYLLKACR 471
             R LDFSEC TPGK TE+ + S+A+ FSSPS+YLLK CR
Sbjct: 989  CRTLDFSECGTPGKLTENGKSSSAISFSSPSAYLLKGCR 1027


>dbj|BAB70511.1| Myb [Nicotiana tabacum]
          Length = 1042

 Score =  176 bits (447), Expect = 1e-42
 Identities = 95/158 (60%), Positives = 114/158 (72%), Gaps = 4/158 (2%)
 Frame = +1

Query: 10   GAENLNIFGETPFKRSIDSPSAWKSPWFINSFVPGPRVXXXXXXXXXXXGYFMSPGDGKS 189
            GAE ++I GETP+KRSI+SPSAWKSPWFINS +  PR+             FMSPGD +S
Sbjct: 888  GAETVSISGETPYKRSIESPSAWKSPWFINSLLSSPRLDNELNFEDL--ALFMSPGD-RS 944

Query: 190  YDAIGLMKQLSEHTAAALADAKEVLGDETPDTILKNRCSSNEKEKAES---TSNVLTERR 360
            YDAIGLMKQLSE TA A ADA+EVLG ETP++IL+ R S N+K        ++NV++ERR
Sbjct: 945  YDAIGLMKQLSEQTAGAFADAQEVLGGETPESILRGRNSKNQKADENHSLLSANVMSERR 1004

Query: 361  VLDFSECDTPGKGTESRRFSTA-MIFSSPSSYLLKACR 471
             LDFSEC +PGKG E+  F T+   FSSPSSYLLK CR
Sbjct: 1005 TLDFSECGSPGKGKETENFCTSNNSFSSPSSYLLKGCR 1042


>ref|XP_002281528.2| PREDICTED: myb-related protein 3R-1-like [Vitis vinifera]
          Length = 1051

 Score =  175 bits (443), Expect = 4e-42
 Identities = 99/163 (60%), Positives = 108/163 (66%), Gaps = 8/163 (4%)
 Frame = +1

Query: 7    DGAENLNIFGETPFKRSIDSPSAWKSPWFINSFVPGPRVXXXXXXXXXXXGYFMSPGDGK 186
            D     ++FGETPFKRSIDSPSAWKSPWFINSFVPGPRV            YFMSPGD +
Sbjct: 893  DDVGTFSLFGETPFKRSIDSPSAWKSPWFINSFVPGPRVDTEISVEDIE--YFMSPGD-R 949

Query: 187  SYDAIGLMKQLSEHTAAALADAKEVLGDETPDTILKNRCSSNE--------KEKAESTSN 342
            SYDAIGLMKQLSEHTA   ADAKEVL     + + K RCSSN         +  +   S 
Sbjct: 950  SYDAIGLMKQLSEHTAETFADAKEVLRIGASEVMSKERCSSNNNHDPDHQLENHSHLASE 1009

Query: 343  VLTERRVLDFSECDTPGKGTESRRFSTAMIFSSPSSYLLKACR 471
            VLTE RVLDFS+C TPGK T   + S A  FSSPSSYLLK CR
Sbjct: 1010 VLTE-RVLDFSDCGTPGKETTKGKSSAAPGFSSPSSYLLKGCR 1051


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