BLASTX nr result

ID: Panax21_contig00017857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017857
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272180.1| PREDICTED: mitochondrial outer membrane prot...    69   6e-23
emb|CAN64922.1| hypothetical protein VITISV_017201 [Vitis vinifera]    69   6e-23
ref|XP_004146313.1| PREDICTED: mitochondrial outer membrane prot...    67   2e-21
ref|XP_004172904.1| PREDICTED: mitochondrial outer membrane prot...    67   4e-21
ref|XP_002325061.1| porin/voltage-dependent anion-selective chan...    65   3e-20

>ref|XP_002272180.1| PREDICTED: mitochondrial outer membrane protein porin of 36 kDa
           [Vitis vinifera] gi|297735387|emb|CBI17827.3| unnamed
           protein product [Vitis vinifera]
          Length = 277

 Score = 68.9 bits (167), Expect(2) = 6e-23
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = -1

Query: 381 GKVAMLCQREWRPKSLVTVSAECDTKAVNAAPKLGIALALKP 256
           GK AMLCQREWRPKSL+TVS E D KA N A KLG+ALALKP
Sbjct: 236 GKFAMLCQREWRPKSLITVSGEYDPKANNGATKLGLALALKP 277



 Score = 65.1 bits (157), Expect(2) = 6e-23
 Identities = 31/43 (72%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
 Frame = -3

Query: 604 TDRGQTLKASYVQSVNPS-SGTEVAAEMIHKFSTYENSFSIGS 479
           TD+G+TLKASY+ SVNP   GT VAAE+ HKF+TYENSF+IGS
Sbjct: 176 TDKGETLKASYIHSVNPPYGGTTVAAELTHKFNTYENSFTIGS 218


>emb|CAN64922.1| hypothetical protein VITISV_017201 [Vitis vinifera]
          Length = 277

 Score = 68.9 bits (167), Expect(2) = 6e-23
 Identities = 33/42 (78%), Positives = 35/42 (83%)
 Frame = -1

Query: 381 GKVAMLCQREWRPKSLVTVSAECDTKAVNAAPKLGIALALKP 256
           GK AMLCQREWRPKSL+TVS E D KA N A KLG+ALALKP
Sbjct: 236 GKFAMLCQREWRPKSLITVSGEYDPKANNGATKLGLALALKP 277



 Score = 65.1 bits (157), Expect(2) = 6e-23
 Identities = 31/43 (72%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
 Frame = -3

Query: 604 TDRGQTLKASYVQSVNPS-SGTEVAAEMIHKFSTYENSFSIGS 479
           TD+G+TLKASY+ SVNP   GT VAAE+ HKF+TYENSF+IGS
Sbjct: 176 TDKGETLKASYIHSVNPPYGGTTVAAELTHKFNTYENSFTIGS 218


>ref|XP_004146313.1| PREDICTED: mitochondrial outer membrane protein porin 4-like
           [Cucumis sativus]
          Length = 276

 Score = 66.6 bits (161), Expect(2) = 2e-21
 Identities = 29/42 (69%), Positives = 39/42 (92%)
 Frame = -1

Query: 381 GKVAMLCQREWRPKSLVTVSAECDTKAVNAAPKLGIALALKP 256
           GK AML QR+WRPKSLVT+SAE D+KA++++PK+G+A+ALKP
Sbjct: 235 GKAAMLFQRQWRPKSLVTLSAEYDSKAIDSSPKIGLAIALKP 276



 Score = 62.0 bits (149), Expect(2) = 2e-21
 Identities = 42/108 (38%), Positives = 50/108 (46%)
 Frame = -3

Query: 802 NAGISFNRPDFTAALILYVSASLFVFDN*SRRTFYFPSVLLIHVPLLQSFSTDWYK*KNT 623
           NAGIS N+ DF+AAL+L                                           
Sbjct: 159 NAGISLNKSDFSAALML------------------------------------------- 175

Query: 622 RLICCXTDRGQTLKASYVQSVNPSSGTEVAAEMIHKFSTYENSFSIGS 479
                 TD+GQ LKASYV S++P + T VAAEM HKFST ENSF+IGS
Sbjct: 176 ------TDKGQALKASYVHSLDPLNETMVAAEMTHKFSTSENSFTIGS 217


>ref|XP_004172904.1| PREDICTED: mitochondrial outer membrane protein porin 4-like,
           partial [Cucumis sativus]
          Length = 248

 Score = 66.6 bits (161), Expect(2) = 4e-21
 Identities = 29/42 (69%), Positives = 39/42 (92%)
 Frame = -1

Query: 381 GKVAMLCQREWRPKSLVTVSAECDTKAVNAAPKLGIALALKP 256
           GK AML QR+WRPKSLVT+SAE D+KA++++PK+G+A+ALKP
Sbjct: 207 GKAAMLFQRQWRPKSLVTLSAEYDSKAIDSSPKIGLAIALKP 248



 Score = 61.2 bits (147), Expect(2) = 4e-21
 Identities = 42/108 (38%), Positives = 50/108 (46%)
 Frame = -3

Query: 802 NAGISFNRPDFTAALILYVSASLFVFDN*SRRTFYFPSVLLIHVPLLQSFSTDWYK*KNT 623
           NAGIS N+ DF+AAL+L                                           
Sbjct: 131 NAGISLNKSDFSAALML------------------------------------------- 147

Query: 622 RLICCXTDRGQTLKASYVQSVNPSSGTEVAAEMIHKFSTYENSFSIGS 479
                 TD+GQ LKASYV S++P + T VAAEM HKFST ENSF+IGS
Sbjct: 148 ------TDKGQGLKASYVHSLDPLNETMVAAEMTHKFSTSENSFTIGS 189


>ref|XP_002325061.1| porin/voltage-dependent anion-selective channel protein [Populus
           trichocarpa] gi|118489666|gb|ABK96634.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|222866495|gb|EEF03626.1| porin/voltage-dependent
           anion-selective channel protein [Populus trichocarpa]
          Length = 275

 Score = 65.5 bits (158), Expect(2) = 3e-20
 Identities = 32/43 (74%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = -1

Query: 381 GKVAMLCQREWRPKSLVTVSAECDTKAVN-AAPKLGIALALKP 256
           GK AMLCQ EWRPKSL+T SAE D+KA + AAPK G+ALALKP
Sbjct: 233 GKAAMLCQHEWRPKSLITFSAEYDSKATHAAAPKFGLALALKP 275



 Score = 59.3 bits (142), Expect(2) = 3e-20
 Identities = 41/108 (37%), Positives = 48/108 (44%)
 Frame = -3

Query: 802 NAGISFNRPDFTAALILYVSASLFVFDN*SRRTFYFPSVLLIHVPLLQSFSTDWYK*KNT 623
           NAGI  N+PDF+AA +L                                           
Sbjct: 159 NAGIGLNKPDFSAAFLL------------------------------------------- 175

Query: 622 RLICCXTDRGQTLKASYVQSVNPSSGTEVAAEMIHKFSTYENSFSIGS 479
                 TD+GQTLKASYV SVNP     VAAEM HK S++ENSF+IGS
Sbjct: 176 ------TDKGQTLKASYVHSVNPLH--SVAAEMTHKLSSFENSFTIGS 215


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