BLASTX nr result

ID: Panax21_contig00017855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017855
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]   281   9e-74
ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   278   6e-73
ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   278   6e-73
ref|XP_003607389.1| U4/U6.U5 tri-snRNP-associated protein [Medic...   278   8e-73
ref|XP_003541464.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   276   4e-72

>emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]
          Length = 566

 Score =  281 bits (719), Expect = 9e-74
 Identities = 137/144 (95%), Positives = 139/144 (96%)
 Frame = -1

Query: 707 VPLFNILKKFDGESITEVVRPHIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF 528
           VPLFNILKKFDGE +TEVVRP IARMRYRVTRLPQYLILHMRRFTKNNFF+EKNPTLVNF
Sbjct: 422 VPLFNILKKFDGELVTEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFIEKNPTLVNF 481

Query: 527 PVKNLELKDYIPLPAPKGNEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQD 348
           PVKNLELKDYIPLPAPK NEKLRSKYDLIANIVHDGKPGEG YRVFVQRKSEELWYEMQD
Sbjct: 482 PVKNLELKDYIPLPAPKENEKLRSKYDLIANIVHDGKPGEGFYRVFVQRKSEELWYEMQD 541

Query: 347 LHVSETLPQMVALSEAYMQIYEQQ 276
           LHVSETLPQMVALSE YMQIYEQQ
Sbjct: 542 LHVSETLPQMVALSETYMQIYEQQ 565


>ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
           sativus]
          Length = 550

 Score =  278 bits (712), Expect = 6e-73
 Identities = 136/144 (94%), Positives = 139/144 (96%)
 Frame = -1

Query: 707 VPLFNILKKFDGESITEVVRPHIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF 528
           VPLFNILKKFDGE+ITEVVRP IARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF
Sbjct: 406 VPLFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF 465

Query: 527 PVKNLELKDYIPLPAPKGNEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQD 348
           PVKNLELKDYIPLP PK N+KLRSKYDLIANIVHDGKP EG YRVFVQRKSEELWYEMQD
Sbjct: 466 PVKNLELKDYIPLPTPKDNDKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQD 525

Query: 347 LHVSETLPQMVALSEAYMQIYEQQ 276
           LHVSETLPQMVALSEAYMQIYE+Q
Sbjct: 526 LHVSETLPQMVALSEAYMQIYERQ 549


>ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
           sativus]
          Length = 550

 Score =  278 bits (712), Expect = 6e-73
 Identities = 136/144 (94%), Positives = 139/144 (96%)
 Frame = -1

Query: 707 VPLFNILKKFDGESITEVVRPHIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF 528
           VPLFNILKKFDGE+ITEVVRP IARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF
Sbjct: 406 VPLFNILKKFDGETITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF 465

Query: 527 PVKNLELKDYIPLPAPKGNEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQD 348
           PVKNLELKDYIPLP PK N+KLRSKYDLIANIVHDGKP EG YRVFVQRKSEELWYEMQD
Sbjct: 466 PVKNLELKDYIPLPTPKDNDKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQD 525

Query: 347 LHVSETLPQMVALSEAYMQIYEQQ 276
           LHVSETLPQMVALSEAYMQIYE+Q
Sbjct: 526 LHVSETLPQMVALSEAYMQIYERQ 549


>ref|XP_003607389.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
           gi|355508444|gb|AES89586.1| U4/U6.U5
           tri-snRNP-associated protein [Medicago truncatula]
          Length = 544

 Score =  278 bits (711), Expect = 8e-73
 Identities = 133/144 (92%), Positives = 139/144 (96%)
 Frame = -1

Query: 707 VPLFNILKKFDGESITEVVRPHIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF 528
           VPLFNILKKFDGE+ITEVVRPHIARM+YRVTRLP+Y+ILHMRRFTKNNFFVEKNPTLVNF
Sbjct: 400 VPLFNILKKFDGETITEVVRPHIARMQYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNF 459

Query: 527 PVKNLELKDYIPLPAPKGNEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQD 348
           PVKNLELKDYIPLP PK NEKLR+KYDLIANIVHDGKPGEGSYR FVQRKSEELWYEMQD
Sbjct: 460 PVKNLELKDYIPLPTPKANEKLRTKYDLIANIVHDGKPGEGSYRAFVQRKSEELWYEMQD 519

Query: 347 LHVSETLPQMVALSEAYMQIYEQQ 276
           LHVSETLP +VALSE YMQIYEQQ
Sbjct: 520 LHVSETLPHLVALSETYMQIYEQQ 543


>ref|XP_003541464.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine
           max]
          Length = 563

 Score =  276 bits (705), Expect = 4e-72
 Identities = 131/144 (90%), Positives = 139/144 (96%)
 Frame = -1

Query: 707 VPLFNILKKFDGESITEVVRPHIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNF 528
           VPLFNILKKFDGE++TEVVRPHIARM+YRVTRLP+Y+ILHMRRFTKNNFFVEKNPTLVNF
Sbjct: 419 VPLFNILKKFDGETVTEVVRPHIARMQYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNF 478

Query: 527 PVKNLELKDYIPLPAPKGNEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQD 348
           PVKNLELKDYIPLP PK NEKLR+KYDLIAN+VHDGKPGEG YRVFVQRKSEELWYEMQD
Sbjct: 479 PVKNLELKDYIPLPTPKENEKLRTKYDLIANVVHDGKPGEGFYRVFVQRKSEELWYEMQD 538

Query: 347 LHVSETLPQMVALSEAYMQIYEQQ 276
           LHVSETLP +VALSE YMQIYEQQ
Sbjct: 539 LHVSETLPHLVALSETYMQIYEQQ 562


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