BLASTX nr result

ID: Panax21_contig00017841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017841
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314922.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002312345.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002512034.1| conserved hypothetical protein [Ricinus comm...   144   7e-33
emb|CBI27324.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_003520133.1| PREDICTED: uncharacterized protein LOC100778...   139   2e-31

>ref|XP_002314922.1| predicted protein [Populus trichocarpa] gi|222863962|gb|EEF01093.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/102 (73%), Positives = 86/102 (84%), Gaps = 2/102 (1%)
 Frame = -3

Query: 487 RETQKKDEENLNLKEQLRAEVRKDLNRLETTCHDMASILRGLGISVNGDSGA--NEVHVA 314
           RETQKKDEENLN+KE+ R EVRK+L RLE TC +MAS+LRGLGI V G      N+VH A
Sbjct: 621 RETQKKDEENLNMKERFRVEVRKELYRLEVTCFNMASLLRGLGIHVEGGLKPLPNQVHAA 680

Query: 313 FKRALLRFHPDRALQSDIRQQVEAEEKFKLISRMKEKYLSTS 188
           +KRALL+ HPDRA ++DIRQQVEAEEKFKLISRMKEK+LSTS
Sbjct: 681 YKRALLKLHPDRASKTDIRQQVEAEEKFKLISRMKEKFLSTS 722


>ref|XP_002312345.1| predicted protein [Populus trichocarpa] gi|222852165|gb|EEE89712.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/102 (73%), Positives = 87/102 (85%), Gaps = 2/102 (1%)
 Frame = -3

Query: 487 RETQKKDEENLNLKEQLRAEVRKDLNRLETTCHDMASILRGLGISVNGDSGA--NEVHVA 314
           RETQKKDEENLN+KE+ R EVRK+L RLE TC +MAS+LRGLGI V G      N+VH A
Sbjct: 13  RETQKKDEENLNIKERFRVEVRKELYRLEVTCINMASLLRGLGIHVEGGFQPLPNQVHAA 72

Query: 313 FKRALLRFHPDRALQSDIRQQVEAEEKFKLISRMKEKYLSTS 188
           +KRALL+FHPDRA ++DIR+QVEAEEKFKLISRMKEK+LSTS
Sbjct: 73  YKRALLKFHPDRASKTDIRRQVEAEEKFKLISRMKEKFLSTS 114


>ref|XP_002512034.1| conserved hypothetical protein [Ricinus communis]
           gi|223549214|gb|EEF50703.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 632

 Score =  144 bits (363), Expect = 7e-33
 Identities = 74/102 (72%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
 Frame = -3

Query: 487 RETQKKDEENLNLKEQLRAEVRKDLNRLETTCHDMASILRGLGISVNGDSG--ANEVHVA 314
           RETQ+KDEENLN+KE LR EVRK+L +LE  C DMAS+LRGLGI V G       EVH A
Sbjct: 529 RETQRKDEENLNMKENLRTEVRKELYQLENACIDMASLLRGLGIQVGGGFHPLTQEVHAA 588

Query: 313 FKRALLRFHPDRALQSDIRQQVEAEEKFKLISRMKEKYLSTS 188
           +KRALL+FHPDRA ++DIRQQVEAEEKFKLISRMK+K+LSTS
Sbjct: 589 YKRALLKFHPDRASRTDIRQQVEAEEKFKLISRMKQKFLSTS 630


>emb|CBI27324.3| unnamed protein product [Vitis vinifera]
          Length = 620

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/102 (69%), Positives = 85/102 (83%), Gaps = 2/102 (1%)
 Frame = -3

Query: 487 RETQKKDEENLNLKEQLRAEVRKDLNRLETTCHDMASILRGLGISVNGD--SGANEVHVA 314
           RETQKKDEEN+N+KE++R EVRK+L++LE TC DMAS+LRGL I V G     +NEVH A
Sbjct: 519 RETQKKDEENMNMKEKIRLEVRKELDKLEMTCSDMASLLRGLEIHVGGGFCPSSNEVHAA 578

Query: 313 FKRALLRFHPDRALQSDIRQQVEAEEKFKLISRMKEKYLSTS 188
           +KRALL+FHPDRA ++DI  QVEAEEKFKLISRMKEK+L  S
Sbjct: 579 YKRALLKFHPDRASRTDIYHQVEAEEKFKLISRMKEKFLLPS 620


>ref|XP_003520133.1| PREDICTED: uncharacterized protein LOC100778452 [Glycine max]
          Length = 555

 Score =  139 bits (351), Expect = 2e-31
 Identities = 71/102 (69%), Positives = 83/102 (81%), Gaps = 2/102 (1%)
 Frame = -3

Query: 487 RETQKKDEENLNLKEQLRAEVRKDLNRLETTCHDMASILRGLGISVNGD--SGANEVHVA 314
           RETQKKDEE +NLKEQLR E++K LN+LE  CHDM S+LRGLGI V G      NEVH A
Sbjct: 452 RETQKKDEEVMNLKEQLRVEIQKGLNQLEMRCHDMPSLLRGLGIQVGGSFIPLPNEVHAA 511

Query: 313 FKRALLRFHPDRALQSDIRQQVEAEEKFKLISRMKEKYLSTS 188
           +KRALL+FHPDRA ++D+R QVEAEEKFKLISR+KEK+  TS
Sbjct: 512 YKRALLKFHPDRASKTDVRAQVEAEEKFKLISRLKEKFGMTS 553


Top