BLASTX nr result

ID: Panax21_contig00017836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017836
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32284.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated...    74   1e-11
ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, p...    72   5e-11
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>emb|CBI32284.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -1

Query: 423 DELKGHIRNLKRSVEEEIRIQQAMQEIQGIISPLLRIAGR 304
           D LKGHIRNLKRSVEEE+RIQQ++QEIQGIISPLLRIAGR
Sbjct: 420 DVLKGHIRNLKRSVEEEVRIQQSLQEIQGIISPLLRIAGR 459


>ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Vitis vinifera]
          Length = 528

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = -1

Query: 423 DELKGHIRNLKRSVEEEIRIQQAMQEIQGIISPLLRIAGR 304
           D LKGHIRNLKRSVEEE+RIQQ++QEIQGIISPLLRIAGR
Sbjct: 488 DVLKGHIRNLKRSVEEEVRIQQSLQEIQGIISPLLRIAGR 527


>ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|222861816|gb|EEE99358.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = -1

Query: 423 DELKGHIRNLKRSVEEEIRIQQAMQEIQGIISPLLRIAGR 304
           D LKGHIRNLKRSVEEEIRIQ ++QEIQG+ISPLLRIAGR
Sbjct: 494 DALKGHIRNLKRSVEEEIRIQHSLQEIQGVISPLLRIAGR 533


>ref|XP_002524308.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223536399|gb|EEF38048.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 525

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/40 (90%), Positives = 37/40 (92%)
 Frame = -1

Query: 423 DELKGHIRNLKRSVEEEIRIQQAMQEIQGIISPLLRIAGR 304
           D LKGHIRNLKRSVEEEIRI  A+QEIQGIISPLLRIAGR
Sbjct: 485 DALKGHIRNLKRSVEEEIRIHHALQEIQGIISPLLRIAGR 524


>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = -1

Query: 423 DELKGHIRNLKRSVEEEIRIQQAMQEIQGIISPLLRIAGR 304
           D LK HIRNLKRSVEEEIRIQ ++QEIQGIISPLLRIAGR
Sbjct: 494 DALKSHIRNLKRSVEEEIRIQHSLQEIQGIISPLLRIAGR 533


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