BLASTX nr result

ID: Panax21_contig00017835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017835
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155336.1| PREDICTED: LOW QUALITY PROTEIN: paired amphi...    47   3e-06
gb|ADL36860.1| WRKY domain class transcription factor [Malus x d...    47   3e-06
ref|XP_004135217.1| PREDICTED: LOW QUALITY PROTEIN: paired amphi...    47   3e-06
ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein ...    46   9e-06

>ref|XP_004155336.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3-like 4-like [Cucumis sativus]
          Length = 1419

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1

Query: 261 THDYQAFLKCLHIYSTEIITRKELQGLL 178
           + DYQ FLKCLHIYS EIITR ELQ L+
Sbjct: 341 SEDYQEFLKCLHIYSKEIITRAELQSLM 368



 Score = 29.3 bits (64), Expect(2) = 3e-06
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 325 ISPVVYKQEFALCEIVK*RLRNT 257
           + P +Y QE+A CE VK +LRN+
Sbjct: 319 LHPGLYSQEYAFCERVKEKLRNS 341


>gb|ADL36860.1| WRKY domain class transcription factor [Malus x domestica]
          Length = 1419

 Score = 46.6 bits (109), Expect(2) = 3e-06
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -1

Query: 255 DYQAFLKCLHIYSTEIITRKELQGLL 178
           DYQ FLKCLHIYS EIITR ELQ L+
Sbjct: 340 DYQEFLKCLHIYSKEIITRSELQSLV 365



 Score = 29.6 bits (65), Expect(2) = 3e-06
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -3

Query: 325 ISPVVYKQEFALCEIVK*RLRN 260
           + P +Y QEFA CE VK +LRN
Sbjct: 316 LQPGMYGQEFAFCEKVKEKLRN 337


>ref|XP_004135217.1| PREDICTED: LOW QUALITY PROTEIN: paired amphipathic helix protein
           Sin3-like 4-like [Cucumis sativus]
          Length = 1397

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = -1

Query: 261 THDYQAFLKCLHIYSTEIITRKELQGLL 178
           + DYQ FLKCLHIYS EIITR ELQ L+
Sbjct: 311 SEDYQEFLKCLHIYSKEIITRAELQSLM 338



 Score = 29.3 bits (64), Expect(2) = 3e-06
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 325 ISPVVYKQEFALCEIVK*RLRNT 257
           + P +Y QE+A CE VK +LRN+
Sbjct: 289 LHPGLYSQEYAFCERVKEKLRNS 311


>ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like
           [Glycine max]
          Length = 1407

 Score = 46.2 bits (108), Expect(2) = 9e-06
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -1

Query: 255 DYQAFLKCLHIYSTEIITRKELQGLL 178
           DYQ FLKCLHIYS EIITR ELQ L+
Sbjct: 334 DYQEFLKCLHIYSREIITRHELQSLV 359



 Score = 28.5 bits (62), Expect(2) = 9e-06
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 331 NCISPVVYKQEFALCEIVK*RLRN 260
           N +   +Y QEFA CE VK +LRN
Sbjct: 308 NFVISGMYSQEFAFCENVKEKLRN 331


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