BLASTX nr result

ID: Panax21_contig00017830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017830
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322718.1| predicted protein [Populus trichocarpa] gi|2...    80   5e-13
ref|XP_002517792.1| conserved hypothetical protein [Ricinus comm...    76   6e-12
ref|XP_002876422.1| hypothetical protein ARALYDRAFT_486190 [Arab...    76   8e-12
ref|NP_191304.1| uncharacterized protein [Arabidopsis thaliana] ...    74   4e-11
ref|XP_002308944.1| predicted protein [Populus trichocarpa] gi|1...    72   1e-10

>ref|XP_002322718.1| predicted protein [Populus trichocarpa] gi|222867348|gb|EEF04479.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 40/83 (48%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
 Frame = -3

Query: 579 MAKYMELLDAGVRIVARFHSHCPQTARMNYHPPSEA----HHHENQHXXXXXXXXXXXXX 412
           M KY+ELLDAGVRI  RF+SHCPQTARM YHPPS +    HHH + H             
Sbjct: 1   MGKYVELLDAGVRIAGRFYSHCPQTARMYYHPPSNSEDLHHHHHHGHNGGSGSQATTQDS 60

Query: 411 GQAGQVGFKEWRGVDTTDVILYS 343
            +    G K   G  TTD+  YS
Sbjct: 61  TRVASCGVKAATGFGTTDLAFYS 83


>ref|XP_002517792.1| conserved hypothetical protein [Ricinus communis]
           gi|223543064|gb|EEF44599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 79

 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = -3

Query: 579 MAKYMELLDAGVRIVARFHSHCPQTARMNYHPPSEAHHHENQH 451
           M KYME+LDAGVRIVARFHSHCPQTARM YHPP+ +  H + H
Sbjct: 1   MGKYMEILDAGVRIVARFHSHCPQTARMYYHPPANSDEHHHHH 43


>ref|XP_002876422.1| hypothetical protein ARALYDRAFT_486190 [Arabidopsis lyrata subsp.
           lyrata] gi|297322260|gb|EFH52681.1| hypothetical protein
           ARALYDRAFT_486190 [Arabidopsis lyrata subsp. lyrata]
          Length = 88

 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = -3

Query: 579 MAKYMELLDAGVRIVARFHSHCPQTARMNYHPPSEAHHH 463
           M KY E+LDAGVRI ARFHSHCPQTAR+ YHPPS+ HHH
Sbjct: 1   MGKYTEMLDAGVRIAARFHSHCPQTARLYYHPPSDGHHH 39


>ref|NP_191304.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6706416|emb|CAB66102.1| putative protein [Arabidopsis
           thaliana] gi|21537251|gb|AAM61592.1| unknown
           [Arabidopsis thaliana] gi|98961017|gb|ABF58992.1|
           At3g57450 [Arabidopsis thaliana]
           gi|332646135|gb|AEE79656.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 96

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = -3

Query: 579 MAKYMELLDAGVRIVARFHSHCPQTARMNYHPPSEAHHH 463
           M KY E+LD GVRI ARFHSHCPQTAR+ YHPPS+ HHH
Sbjct: 1   MGKYTEMLDVGVRIAARFHSHCPQTARLYYHPPSDNHHH 39


>ref|XP_002308944.1| predicted protein [Populus trichocarpa] gi|118488733|gb|ABK96177.1|
           unknown [Populus trichocarpa]
           gi|222854920|gb|EEE92467.1| predicted protein [Populus
           trichocarpa]
          Length = 84

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
 Frame = -3

Query: 567 MELLDAGVRIVARFHSHCPQTARMNYHPPS---EAHHHENQ----HXXXXXXXXXXXXXG 409
           M LLD+GVRI  RF+SHCPQTAR+ YHPPS   + HHH+ Q    H              
Sbjct: 1   MGLLDSGVRIAGRFYSHCPQTARLYYHPPSNSDDLHHHQQQQRHGHNGGSESQAPTRGSS 60

Query: 408 QAGQVGFKEWRGVDTTDVILYS 343
           +    G K  +G+DT D++ YS
Sbjct: 61  RGASCGVKAAKGLDTIDIVFYS 82


Top