BLASTX nr result
ID: Panax21_contig00017825
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017825
(1237 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin... 265 2e-68
ref|XP_002533810.1| nuclear receptor binding set domain containi... 210 7e-52
ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|2... 166 9e-39
emb|CBI17411.3| unnamed protein product [Vitis vinifera] 106 1e-20
ref|XP_002877789.1| hypothetical protein ARALYDRAFT_906461 [Arab... 72 2e-10
>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis
vinifera]
Length = 1643
Score = 265 bits (676), Expect = 2e-68
Identities = 178/408 (43%), Positives = 225/408 (55%), Gaps = 9/408 (2%)
Frame = +2
Query: 14 QLQKVGGASDSKLYYSDFGRSENVNATRDG-KQTEGHWHGNIATIHSNNNNDLVRSDRWA 190
Q Q+V S + D G + ++NAT G K EG + N ATI SN NN+LV+ D W
Sbjct: 1012 QSQQVRVVSKDRENNWDGGLNGSMNATWIGNKLNEGPGNSNDATI-SNGNNELVKRDGWG 1070
Query: 191 AQSSVWTAPV-ISYKKETTAGSCSQDQDSFKGNSSYYNPLKLRSRLSSSTFSGAEYATHS 367
+ SS W+ P I KE GS SQ DS KGNSS+ + ++ S LSSST SG + T
Sbjct: 1071 SCSSSWSTPADIMNSKEVEIGSFSQGWDSLKGNSSWSDQPQVYSSLSSSTLSGKSFGTGL 1130
Query: 368 HH-EINHEVKRCNSDPYHENLNSHGTTVNKITGGHIFENHSNSRGFSGQSSEENLRH-SP 541
H H V+R + H NLNSH T V ++ GH SGQS +EN R S
Sbjct: 1131 HQGREGHGVERWDPGQNHGNLNSHRTAVVQVNSGH-----------SGQSPKENCRPLSI 1179
Query: 542 VKFXXXXXXXXXXXXVTKSTDSPDQNGEMNTTNLHSPSRKTSNGDWEGEAAENKEXXXXX 721
+ V K + + +Q+ ++N NL SP+ K S+GDW+G+AA
Sbjct: 1180 ISSSSGWDSNFDVVSVAKLSKTLEQDHDINFPNLPSPTPKPSDGDWKGQAA--------- 1230
Query: 722 XXXHDSDMPSPTPNTSNEYQKCQTVENKQYVSSNVPIQDSGPSWSSASSLVVGGAQLADI 901
E+KQ VSS+VP+QDSGPSWS+ASSLV GG +L ++
Sbjct: 1231 -------------------------ESKQSVSSDVPVQDSGPSWSTASSLVGGGTKLPEV 1265
Query: 902 TYEWGGY-SPTPVKRSVEEWDSNLVSFLSLKPPE---GHVPTSTSTSGELSHFSLSQPAS 1069
+WGGY SPTP+K SVEEWDS L S SLKP E H T TS S +L+H S P
Sbjct: 1266 ASDWGGYSSPTPMKPSVEEWDSTLASVSSLKPTEVASDHAATPTSESVQLTHSSPPYPTP 1325
Query: 1070 NISSWQTV-SEPIEFSTLAEESVSDLLAEVDAMESQGGLASPTSVMKC 1210
N SSWQ + + P E S++ E SVSDLLAEV+AMES GL SPTSVMKC
Sbjct: 1326 NASSWQPIDTGPTEISSVTEASVSDLLAEVEAMESLDGLPSPTSVMKC 1373
>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
nuclear receptor binding set domain containing protein 1,
nsd, putative [Ricinus communis]
Length = 1586
Score = 210 bits (534), Expect = 7e-52
Identities = 149/365 (40%), Positives = 187/365 (51%), Gaps = 7/365 (1%)
Frame = +2
Query: 140 TIHSNNNNDLVRSDRWAAQSSVWTAPV-ISYKKETTAGSCSQDQDSFKGNSSYYNPLKLR 316
T++++ ++ VRS+ A S WT PV ++ K+ S SQ + KG Y PL
Sbjct: 948 TVNADGDDKPVRSNSLGAHCSTWTKPVDVAIPKDGQVQSSSQQWELSKGGELYETPLP-- 1005
Query: 317 SRLSSSTFSGAEYATHSHHEINHEVKRCNSDPYHENLNSHGTTVNKITGGHIFENHSNSR 496
AT H + CN+D SH T + G E +S
Sbjct: 1006 ------------QATEGHRDEKWSPHPCNADGI-----SHKATDGQTKIGESDEKQGDSE 1048
Query: 497 GFSGQSSEENLRHSPVKFXXXXXXXXXXXXVTKSTDSPDQNGEMNT--TNLHSPSRKTSN 670
G S QSS +N R PV DS + NT ++ S K+
Sbjct: 1049 GHSSQSSGQNWRPQPV-------------------DSSSSRWDSNTGCVSMAKSSEKSE- 1088
Query: 671 GDWEGEAAENKEXXXXXXXXHDSDMPSPTPNTSNEYQKCQTVENKQYVSSNVPIQDSGPS 850
+N+E SD+PSPTP S+E K Q ENK VSS+ P+QDSGPS
Sbjct: 1089 --------QNQEIVV-------SDLPSPTPKQSHEELKGQA-ENKLSVSSSAPVQDSGPS 1132
Query: 851 WSSASSLVVGGAQLADITYEWGGYSPTPVKRSVEEWDSNLVSFLSLKPPEG---HVPTST 1021
WS+ASSLVVG QL ++ EWGGYSP K SVEEWDSNLVS SLKP EG H T T
Sbjct: 1133 WSTASSLVVG-RQLPEVAGEWGGYSPASAKPSVEEWDSNLVSVSSLKPTEGANDHAATPT 1191
Query: 1022 STSGELSHFSLSQPASNISSWQ-TVSEPIEFSTLAEESVSDLLAEVDAMESQGGLASPTS 1198
S + +L++ S QP + S+WQ V EP EF +L +ESVSDLLAEV+AMES GGL SPTS
Sbjct: 1192 SGTDKLTNSSPPQPELDTSTWQPLVPEPNEFCSLVDESVSDLLAEVEAMESLGGLPSPTS 1251
Query: 1199 VMKCG 1213
M CG
Sbjct: 1252 KMSCG 1256
>ref|XP_002310841.1| predicted protein [Populus trichocarpa] gi|222853744|gb|EEE91291.1|
predicted protein [Populus trichocarpa]
Length = 1256
Score = 166 bits (421), Expect = 9e-39
Identities = 91/160 (56%), Positives = 108/160 (67%), Gaps = 4/160 (2%)
Frame = +2
Query: 740 DMPSPTPNTSNEYQKCQTVENKQYVSSNVPIQDSGPSWSSASSLVVGGAQLADITYEWGG 919
D+PSPTP + K T EN +SS +P+ DSG SWS+ASSLVVGGA LA + EWGG
Sbjct: 876 DLPSPTPKQHLKDLKGHTAENNHSISSKLPVLDSGCSWSTASSLVVGGATLARVAGEWGG 935
Query: 920 YSPTPVKRSVEEWDSNLVSFLSLKPPEG---HVPTSTSTSGELSHFSLSQPASNISSWQ- 1087
YSP PVK VEEWDSN VS SLKP +G H T T SG L+H + P + S WQ
Sbjct: 936 YSPAPVK-PVEEWDSNHVSASSLKPTDGGSDHASTQTPDSGPLAHSPSTHPVIDASDWQR 994
Query: 1088 TVSEPIEFSTLAEESVSDLLAEVDAMESQGGLASPTSVMK 1207
+ EP EF +L +ESVSDLLAEV+AMES GGL SPTS ++
Sbjct: 995 IIPEPTEFCSLVDESVSDLLAEVEAMESLGGLPSPTSKLR 1034
>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
Length = 1362
Score = 106 bits (265), Expect = 1e-20
Identities = 60/100 (60%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Frame = +2
Query: 923 SPTPVKRSVEEWDSNLVSFLSLKPPE---GHVPTSTSTSGELSHFSLSQPASNISSWQTV 1093
SPTP+K SVEEWDS L S SLKP E H T TS S +L+H S P N SSWQ +
Sbjct: 1054 SPTPMKPSVEEWDSTLASVSSLKPTEVASDHAATPTSESVQLTHSSPPYPTPNASSWQPI 1113
Query: 1094 SE-PIEFSTLAEESVSDLLAEVDAMESQGGLASPTSVMKC 1210
P E S++ E SVSDLLAEV+AMES GL SPTSVMKC
Sbjct: 1114 DTGPTEISSVTEASVSDLLAEVEAMESLDGLPSPTSVMKC 1153
Score = 58.2 bits (139), Expect = 4e-06
Identities = 41/94 (43%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +2
Query: 14 QLQKVGGASDSKLYYSDFGRSENVNATRDG-KQTEGHWHGNIATIHSNNNNDLVRSDRWA 190
Q Q+V S + D G + ++NAT G K EG + N ATI SN NN+LV+ D W
Sbjct: 932 QSQQVRVVSKDRENNWDGGLNGSMNATWIGNKLNEGPGNSNDATI-SNGNNELVKRDGWG 990
Query: 191 AQSSVWTAPV-ISYKKETTAGSCSQDQDSFKGNS 289
+ SS W+ P I KE GS SQ DS KGN+
Sbjct: 991 SCSSSWSTPADIMNSKEVEIGSFSQGWDSLKGNT 1024
>ref|XP_002877789.1| hypothetical protein ARALYDRAFT_906461 [Arabidopsis lyrata subsp.
lyrata] gi|297323627|gb|EFH54048.1| hypothetical protein
ARALYDRAFT_906461 [Arabidopsis lyrata subsp. lyrata]
Length = 1292
Score = 72.4 bits (176), Expect = 2e-10
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 3/209 (1%)
Frame = +2
Query: 593 KSTDSPDQNGEMNTTNLHSPSRKTSNGDWEGEAAENK-EXXXXXXXXHDSDMPSPTPNTS 769
+ T DQ+ + H+ ++ +G G A + H D PSPTP +S
Sbjct: 878 RQTPGTDQSNAVRADGNHNTTKTLDDGTNGGSAINGSVQAPNLNQESHFLDFPSPTPKSS 937
Query: 770 NEYQKCQTVENKQYVSSNVPIQD-SGPSWSSASSLVVGGAQLADITYEWGGYSPTPVKRS 946
E + Q E Q +SS V ++ SG +WS+ ++ A GG P
Sbjct: 938 PEDLEAQAAETIQSLSSCVLVKGPSGVTWSTTTTATTDAATTTSSVVITGGQLP-----Q 992
Query: 947 VEEWDSNLVSFLSLKPPEGHVPTSTSTSGELSHFSLSQPASNISSWQT-VSEPIEFSTLA 1123
V + ++ +++ S+KP + +T+T S + + S W V++P E
Sbjct: 993 VTQQNAVVLAAPSVKPIDLAADHATATQT-----SDNTQVAQASGWPAIVADPDE----C 1043
Query: 1124 EESVSDLLAEVDAMESQGGLASPTSVMKC 1210
+ESVSDLLAEV+AME G +SPTS C
Sbjct: 1044 DESVSDLLAEVEAMEQNGLPSSPTSTFHC 1072