BLASTX nr result

ID: Panax21_contig00017815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017815
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin...    84   2e-14
emb|CBI17411.3| unnamed protein product [Vitis vinifera]               62   4e-08

>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis
            vinifera]
          Length = 1643

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 58/138 (42%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
 Frame = -2

Query: 406  QLQEVGGASDSKLYNSDFGRSENVNATRDGKQM-EGHWHGNIATIHSNNNNDLARSDRWG 230
            Q Q+V   S  +  N D G + ++NAT  G ++ EG  + N ATI SN NN+L + D WG
Sbjct: 1012 QSQQVRVVSKDRENNWDGGLNGSMNATWIGNKLNEGPGNSNDATI-SNGNNELVKRDGWG 1070

Query: 229  AQSSVWTAPV-ISYKKETTAGSCSQDQDSFKGNSSYYNLLKLRSPLSSSTLSGAEYATHS 53
            + SS W+ P  I   KE   GS SQ  DS KGNSS+ +  ++ S LSSSTLSG  + T  
Sbjct: 1071 SCSSSWSTPADIMNSKEVEIGSFSQGWDSLKGNSSWSDQPQVYSSLSSSTLSGKSFGTGL 1130

Query: 52   HH-EINHEVKRCNSDPYH 2
            H     H V+R +    H
Sbjct: 1131 HQGREGHGVERWDPGQNH 1148


>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
          Length = 1362

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
 Frame = -2

Query: 406  QLQEVGGASDSKLYNSDFGRSENVNATRDGKQM-EGHWHGNIATIHSNNNNDLARSDRWG 230
            Q Q+V   S  +  N D G + ++NAT  G ++ EG  + N ATI SN NN+L + D WG
Sbjct: 932  QSQQVRVVSKDRENNWDGGLNGSMNATWIGNKLNEGPGNSNDATI-SNGNNELVKRDGWG 990

Query: 229  AQSSVWTAPV-ISYKKETTAGSCSQDQDSFKGNS 131
            + SS W+ P  I   KE   GS SQ  DS KGN+
Sbjct: 991  SCSSSWSTPADIMNSKEVEIGSFSQGWDSLKGNT 1024


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