BLASTX nr result

ID: Panax21_contig00017813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017813
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   180   9e-44
ref|XP_002511228.1| bromodomain-containing protein, putative [Ri...   169   2e-40
ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [V...   167   6e-40
ref|XP_002322229.1| global transcription factor group [Populus t...   164   5e-39
ref|XP_003523135.1| PREDICTED: transcription factor GTE10-like [...   159   2e-37

>ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
           [Vitis vinifera]
          Length = 770

 Score =  180 bits (457), Expect = 9e-44
 Identities = 89/142 (62%), Positives = 111/142 (78%), Gaps = 1/142 (0%)
 Frame = -3

Query: 425 PTSDIYSCSNGQRRPMSETFQRFVGMSASQGKKRDPA-GQNELRTKRPTAVGRFDSAKQS 249
           PTSDI SCSNGQ+RP  +  Q+    S  Q KKR P  G+N  + KR  + GRF+S KQ+
Sbjct: 143 PTSDIRSCSNGQKRPPKDKIQKSSEASTHQRKKRPPPPGRNVPKMKRGLS-GRFESVKQA 201

Query: 248 FLPSSLHAMLMKQCETLLNRLQTHQHGWVFNSPVDVVKLNIPDYYTVIKHPMDLGTVKTK 69
             P + ++MLMKQCETLL+RL THQ GW+FN+PVDVV+L IPDY+TVIKHPMDLGT+K+K
Sbjct: 202 APPGTSNSMLMKQCETLLSRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSK 261

Query: 68  LTSGDYLNPLEFAADVRLTFSN 3
           + SG+YL+P +FAADVRLTFSN
Sbjct: 262 MASGEYLSPFDFAADVRLTFSN 283


>ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
           gi|223550343|gb|EEF51830.1| bromodomain-containing
           protein, putative [Ricinus communis]
          Length = 759

 Score =  169 bits (428), Expect = 2e-40
 Identities = 86/141 (60%), Positives = 107/141 (75%)
 Frame = -3

Query: 425 PTSDIYSCSNGQRRPMSETFQRFVGMSASQGKKRDPAGQNELRTKRPTAVGRFDSAKQSF 246
           P+SDI SCS+G +RP  ET  +   +SA Q KKR P G+N  RTK+ ++  R +  K + 
Sbjct: 140 PSSDIRSCSDGLKRPPLETLHKSYAVSAPQSKKRGPPGRNGARTKK-SSHKRSEPEKLAA 198

Query: 245 LPSSLHAMLMKQCETLLNRLQTHQHGWVFNSPVDVVKLNIPDYYTVIKHPMDLGTVKTKL 66
              + +AMLMKQCETLL+RL  HQ+ WVFN+PVDV KLNIPDY+TVIKHPMDLGTVK+K+
Sbjct: 199 PVITSNAMLMKQCETLLSRLMLHQYAWVFNNPVDVEKLNIPDYFTVIKHPMDLGTVKSKI 258

Query: 65  TSGDYLNPLEFAADVRLTFSN 3
           T+G Y +PL FAADVRLTFSN
Sbjct: 259 TTGAYSSPLAFAADVRLTFSN 279


>ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
          Length = 739

 Score =  167 bits (424), Expect = 6e-40
 Identities = 82/140 (58%), Positives = 105/140 (75%)
 Frame = -3

Query: 422 TSDIYSCSNGQRRPMSETFQRFVGMSASQGKKRDPAGQNELRTKRPTAVGRFDSAKQSFL 243
           +SDI SCSNGQR  + +  ++   +++  GKK +P G       R T+ GRF+SA Q+  
Sbjct: 109 SSDILSCSNGQRGHV-DNGRKSSALTSGPGKKLEPLGNKNRAWNRGTS-GRFESATQASA 166

Query: 242 PSSLHAMLMKQCETLLNRLQTHQHGWVFNSPVDVVKLNIPDYYTVIKHPMDLGTVKTKLT 63
           PS+   +LMKQCETLL +L +HQHGWVFN PVD+VKLNIPDY+T+IKHPMDLGT+K K+ 
Sbjct: 167 PSTASVLLMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIKGKIA 226

Query: 62  SGDYLNPLEFAADVRLTFSN 3
           SG Y +PL+FAADVRLTFSN
Sbjct: 227 SGAYSSPLDFAADVRLTFSN 246


>ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
           gi|222869225|gb|EEF06356.1| global transcription factor
           group [Populus trichocarpa]
          Length = 709

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/141 (59%), Positives = 101/141 (71%)
 Frame = -3

Query: 425 PTSDIYSCSNGQRRPMSETFQRFVGMSASQGKKRDPAGQNELRTKRPTAVGRFDSAKQSF 246
           P+SDI SCS+GQ+RP  E       +SA Q KKR P  +N   TK+ T+  R +  K + 
Sbjct: 98  PSSDIRSCSDGQKRPPLEGLHSSFEVSAPQSKKRAPPDRNRGHTKKGTSA-RSEPVKPAA 156

Query: 245 LPSSLHAMLMKQCETLLNRLQTHQHGWVFNSPVDVVKLNIPDYYTVIKHPMDLGTVKTKL 66
                 AMLMKQCE LLNRL  HQ GW+F +PVDVVKLNIPDY+T+IKHPMDLGTVK+K+
Sbjct: 157 PLGISTAMLMKQCEALLNRLMAHQFGWIFKTPVDVVKLNIPDYFTIIKHPMDLGTVKSKI 216

Query: 65  TSGDYLNPLEFAADVRLTFSN 3
            SG+Y +PL FAADVRLTFSN
Sbjct: 217 VSGEYSSPLGFAADVRLTFSN 237


>ref|XP_003523135.1| PREDICTED: transcription factor GTE10-like [Glycine max]
          Length = 781

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/140 (57%), Positives = 102/140 (72%)
 Frame = -3

Query: 422 TSDIYSCSNGQRRPMSETFQRFVGMSASQGKKRDPAGQNELRTKRPTAVGRFDSAKQSFL 243
           +SDI SCS GQ+RP  E+  R + +S   GKKR   G    + K+  + G  + AK +  
Sbjct: 142 SSDIMSCSAGQKRPKLESQHRTMEVSVPHGKKRPLPGHTGPKLKKSMS-GHLEYAKPA-A 199

Query: 242 PSSLHAMLMKQCETLLNRLQTHQHGWVFNSPVDVVKLNIPDYYTVIKHPMDLGTVKTKLT 63
           P + +A LMK CE +LNRL +HQ GWVFN+PVDVVKLNIPDY+TVIKHPMDLGTVK ++T
Sbjct: 200 PVTSYATLMKLCENVLNRLMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKKRIT 259

Query: 62  SGDYLNPLEFAADVRLTFSN 3
           SG+Y NP++FAADVRLTF N
Sbjct: 260 SGEYSNPMDFAADVRLTFEN 279


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