BLASTX nr result

ID: Panax21_contig00017795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017795
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               86   8e-15
gb|ACU18521.1| unknown [Glycine max]                                   77   2e-12
gb|ACU15072.1| unknown [Glycine max]                                   75   1e-11
ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...    74   2e-11
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 47/119 (39%), Positives = 74/119 (62%)
 Frame = -3

Query: 437 DRINNLPISVVGHILSLVSTKDAVQTSILSTKWKQFWKTITSLYFNDGLIFYHQQGISNL 258
           DRI+NLP +V+ HI+S + TK AV TS+LS +W+  W +I +L F+D L+    + I + 
Sbjct: 10  DRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDS 69

Query: 257 GSPLIQSAKFTSFVNRVLLLCTHSRLHRFRLDCG*RYGAALINAWVCAALSRDVLEIVL 81
                +S  F +FV++VLL  + S + +FRL C      + +N+W+C AL R+V E+ L
Sbjct: 70  E----RSICFKNFVDKVLLHGSISCIRKFRLKCSDHELDSAVNSWICTALERNVQELDL 124


>gb|ACU18521.1| unknown [Glycine max]
          Length = 202

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
 Frame = -3

Query: 440 EDRINNLPISVVGHILSLVSTKDAVQTSILSTKWKQFWKTITSLYFNDGLIFYHQQGISN 261
           ED I+ L  S++GHILS + T ++V TS+LS +W   WK+IT L FND L+ + ++    
Sbjct: 26  EDIISKLHESILGHILSFLPTMESVHTSVLSKRWVDAWKSITGLQFNDTLLCFGKK---- 81

Query: 260 LGSPLIQSAKFTSFVNRVLLLCTHSRLHRFRLDCG*R--YGAALINAWVCAALSRDV 96
                +Q  +F  FVN V L   +S +H F L C  R  Y + LI+AW+     R V
Sbjct: 82  -----MQKEQFVCFVNMVFLHLANSSIHNFSL-CLTRYQYDSTLISAWISFIFKRGV 132


>gb|ACU15072.1| unknown [Glycine max]
          Length = 177

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
 Frame = -3

Query: 440 EDRINNLPISVVGHILSLVSTKDAVQTSILSTKWKQFWKTITSLYFNDGLIFYHQQGISN 261
           ED ++ L  S++GHILS + T ++V TS+LS +W   WK+IT L FND L+ + ++    
Sbjct: 26  EDIVSKLHESILGHILSFLPTMESVHTSVLSKRWVDAWKSITGLQFNDTLLCFGKK---- 81

Query: 260 LGSPLIQSAKFTSFVNRVLLLCTHSRLHRFRLDCG*R--YGAALINAWVCAALSRDV 96
                +Q  +F  FVN   L   +S +H F L C  R  Y + LI+AW+     R V
Sbjct: 82  -----MQKEQFVCFVNMEFLHLANSSIHNFSL-CLTRYQYDSTLISAWISFIFKRGV 132


>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/118 (35%), Positives = 62/118 (52%)
 Frame = -3

Query: 440 EDRINNLPISVVGHILSLVSTKDAVQTSILSTKWKQFWKTITSLYFNDGLIFYHQQGISN 261
           +D I+NLP  ++G +LS + TKDAV TS+LS +W   W  IT L F+D         I  
Sbjct: 26  QDLISNLPDHIIGCVLSFLPTKDAVSTSVLSKRWIYLWTFITKLDFDD---------IGY 76

Query: 260 LGSPLIQSAKFTSFVNRVLLLCTHSRLHRFRLDCG*RYGAALINAWVCAALSRDVLEI 87
             S  I+ A F  FV+RVLL      +  F L    +Y ++ IN W+   ++  V ++
Sbjct: 77  CSSNEIRKACFVDFVDRVLLRLNSEHIRSFSLKMSEKYDSSYINKWISIVINLRVRKL 134


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 47/122 (38%), Positives = 70/122 (57%)
 Frame = -3

Query: 452 EESEEDRINNLPISVVGHILSLVSTKDAVQTSILSTKWKQFWKTITSLYFNDGLIFYHQQ 273
           ++S    IN+LP +++ HILS + TKDAV+TSILS KW+  WK++++L F+    F  ++
Sbjct: 33  DDSGGKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFHQ-CYFKAKR 91

Query: 272 GISNLGSPLIQSAKFTSFVNRVLLLCTHSRLHRFRLDCG*RYGAALINAWVCAALSRDVL 93
            I            F + V RVLLL   S + +F L CG    A     WV AA++R+V 
Sbjct: 92  KI------------FMNSVERVLLLRDSSNIEKFTLSCG-IDDATRTRTWVSAAVNRNVK 138

Query: 92  EI 87
           E+
Sbjct: 139 EL 140


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