BLASTX nr result

ID: Panax21_contig00017789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017789
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   318   6e-85
ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   318   6e-85
ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   311   6e-83
ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   307   1e-81
ref|XP_002328711.1| predicted protein [Populus trichocarpa] gi|2...   305   4e-81

>ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score =  318 bits (815), Expect = 6e-85
 Identities = 157/179 (87%), Positives = 168/179 (93%)
 Frame = -2

Query: 539 PVAKRRAIEAQKILQRKGKSSAFENELETTKVVEAKPSLLVKASQLKRDQPEISPTEQIV 360
           PVAKRRA+EAQKIL RKGK+SA E ELE +++ EAKPSLLVKASQ+KRDQPE+SPTEQIV
Sbjct: 22  PVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRDQPEVSPTEQIV 81

Query: 359 QQEKEMIEHLSDRKTLMSVRELAKGITYSEPLPTGWKPPLPIRRMSKKACDAIRKQWHII 180
           QQEKEMIEHLSDRKTLMSVRELAKGITY+EPL TGWKPPLPIRRM KKACD IRKQWHII
Sbjct: 82  QQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKACDLIRKQWHII 141

Query: 179 VDGEDTPPPIKNFKDMRFPEPVLKKLTKKGIVQPTPIQVQGLPVILSGRDMIGIAFTGS 3
           VDG++ PPPIKNFKDMR PEPVLKKL +KGIVQPTPIQVQGLPVILSGRDMIGIAFTGS
Sbjct: 142 VDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGS 200


>ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score =  318 bits (815), Expect = 6e-85
 Identities = 157/179 (87%), Positives = 168/179 (93%)
 Frame = -2

Query: 539 PVAKRRAIEAQKILQRKGKSSAFENELETTKVVEAKPSLLVKASQLKRDQPEISPTEQIV 360
           PVAKRRA+EAQKIL RKGK+SA E ELE +++ EAKPSLLVKASQ+KRDQPE+SPTEQIV
Sbjct: 22  PVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRDQPEVSPTEQIV 81

Query: 359 QQEKEMIEHLSDRKTLMSVRELAKGITYSEPLPTGWKPPLPIRRMSKKACDAIRKQWHII 180
           QQEKEMIEHLSDRKTLMSVRELAKGITY+EPL TGWKPPLPIRRM KKACD IRKQWHII
Sbjct: 82  QQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKACDLIRKQWHII 141

Query: 179 VDGEDTPPPIKNFKDMRFPEPVLKKLTKKGIVQPTPIQVQGLPVILSGRDMIGIAFTGS 3
           VDG++ PPPIKNFKDMR PEPVLKKL +KGIVQPTPIQVQGLPVILSGRDMIGIAFTGS
Sbjct: 142 VDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGS 200


>ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform 1 [Vitis
           vinifera] gi|147861063|emb|CAN78736.1| hypothetical
           protein VITISV_003102 [Vitis vinifera]
           gi|297743544|emb|CBI36411.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score =  311 bits (798), Expect = 6e-83
 Identities = 154/179 (86%), Positives = 166/179 (92%)
 Frame = -2

Query: 539 PVAKRRAIEAQKILQRKGKSSAFENELETTKVVEAKPSLLVKASQLKRDQPEISPTEQIV 360
           PV KRRA+EAQ+ILQRKGKSSA E+E E +K+ EAKPSLLVKASQLKRD PEISP EQIV
Sbjct: 12  PVKKRRAMEAQRILQRKGKSSALEDEAEKSKLAEAKPSLLVKASQLKRDLPEISPAEQIV 71

Query: 359 QQEKEMIEHLSDRKTLMSVRELAKGITYSEPLPTGWKPPLPIRRMSKKACDAIRKQWHII 180
           QQEKEMIEHLSDRKTLMSVRELAKGITY+EPL TGWKPPLPIRRMS+K C++IRKQWHII
Sbjct: 72  QQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMSRKECESIRKQWHII 131

Query: 179 VDGEDTPPPIKNFKDMRFPEPVLKKLTKKGIVQPTPIQVQGLPVILSGRDMIGIAFTGS 3
           VDG++ PPPIKNFKDMRFPEP+LK L  KGIVQPTPIQVQGLPVILSGRDMIGIAFTGS
Sbjct: 132 VDGDEIPPPIKNFKDMRFPEPILKNLKAKGIVQPTPIQVQGLPVILSGRDMIGIAFTGS 190


>ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Glycine
           max]
          Length = 587

 Score =  307 bits (787), Expect = 1e-81
 Identities = 156/180 (86%), Positives = 166/180 (92%), Gaps = 1/180 (0%)
 Frame = -2

Query: 539 PVAKRRAIEAQKILQRKGKSSAF-ENELETTKVVEAKPSLLVKASQLKRDQPEISPTEQI 363
           PVAKRRA+EAQKILQRKGK+SA  +++LE  +V E KPSLLVKASQLKR+QPEIS TEQI
Sbjct: 11  PVAKRRALEAQKILQRKGKASAVTDDDLEKQRVAETKPSLLVKASQLKREQPEISVTEQI 70

Query: 362 VQQEKEMIEHLSDRKTLMSVRELAKGITYSEPLPTGWKPPLPIRRMSKKACDAIRKQWHI 183
           VQQEKEMIE+LSDRKTLMSVRELAKGITY+EPLPTGWKPPL +RRMSKK CD IRKQWHI
Sbjct: 71  VQQEKEMIENLSDRKTLMSVRELAKGITYTEPLPTGWKPPLHVRRMSKKECDLIRKQWHI 130

Query: 182 IVDGEDTPPPIKNFKDMRFPEPVLKKLTKKGIVQPTPIQVQGLPVILSGRDMIGIAFTGS 3
           IVDG D PPPIKNFKDMRFPEPVLKKL  KGIVQPTPIQVQGLPVILSGRDMIGIAFTGS
Sbjct: 131 IVDGGDIPPPIKNFKDMRFPEPVLKKLKAKGIVQPTPIQVQGLPVILSGRDMIGIAFTGS 190


>ref|XP_002328711.1| predicted protein [Populus trichocarpa] gi|222839009|gb|EEE77360.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  305 bits (782), Expect = 4e-81
 Identities = 152/179 (84%), Positives = 164/179 (91%)
 Frame = -2

Query: 539 PVAKRRAIEAQKILQRKGKSSAFENELETTKVVEAKPSLLVKASQLKRDQPEISPTEQIV 360
           PVAKRRA+ AQ ILQR+G  SA E+ELE +K+ EAKPSLLVKASQLKRDQPEIS TEQIV
Sbjct: 12  PVAKRRALTAQMILQRRGNISALEDELEKSKLAEAKPSLLVKASQLKRDQPEISQTEQIV 71

Query: 359 QQEKEMIEHLSDRKTLMSVRELAKGITYSEPLPTGWKPPLPIRRMSKKACDAIRKQWHII 180
           QQEKEMIEHLSD+KTLMSVRELAKGITY+EPL TGWKPPLPIR+MS+K CDAIRKQWHII
Sbjct: 72  QQEKEMIEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLPIRKMSRKECDAIRKQWHII 131

Query: 179 VDGEDTPPPIKNFKDMRFPEPVLKKLTKKGIVQPTPIQVQGLPVILSGRDMIGIAFTGS 3
           VDGE  PPPIK+FKDMRFPEP+LK L  KGIVQPTPIQVQGLPVIL+GRDMIGIAFTGS
Sbjct: 132 VDGEKIPPPIKHFKDMRFPEPILKMLKAKGIVQPTPIQVQGLPVILTGRDMIGIAFTGS 190


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