BLASTX nr result

ID: Panax21_contig00017787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017787
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   213   1e-53
ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   213   1e-53
ref|XP_002530820.1| hect ubiquitin-protein ligase, putative [Ric...   197   7e-49
ref|XP_004147040.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-...   189   3e-46
ref|NP_195572.2| E3 ubiquitin-protein ligase UPL3 [Arabidopsis t...   187   6e-46

>ref|XP_002278452.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 2 [Vitis
            vinifera]
          Length = 1814

 Score =  213 bits (543), Expect = 1e-53
 Identities = 111/141 (78%), Positives = 124/141 (87%)
 Frame = +2

Query: 35   RIADVSASKEENLVEVISEMLAELSKGHGVSTFEFIGSGVVDALLNYFSFGYSSKEKISE 214
            R+ D S +KEENL  V+SEMLAELSKG GVSTFEFIGSGVV ALLNYFS G+ SKE+ISE
Sbjct: 723  RLIDTSTNKEENLTAVLSEMLAELSKGDGVSTFEFIGSGVVAALLNYFSCGHFSKERISE 782

Query: 215  ANLSKLRQQAIRRYKSFVAVALPSGVHERNVAPMSILVQKLQNALSSLERFPVVLSHSAR 394
            ANLSK R QA++R+KSFVA+ALPS +  RN APM++LVQKLQNALSSLERFPVVLSHS+R
Sbjct: 783  ANLSKFRTQALKRFKSFVAIALPSNIDGRNAAPMTVLVQKLQNALSSLERFPVVLSHSSR 842

Query: 395  SSSGNMRLSYGLSALSQPFKL 457
            SSSGN RLS GLSALSQPFKL
Sbjct: 843  SSSGNARLSSGLSALSQPFKL 863


>ref|XP_002278408.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like isoform 1 [Vitis
            vinifera]
          Length = 1896

 Score =  213 bits (543), Expect = 1e-53
 Identities = 111/141 (78%), Positives = 124/141 (87%)
 Frame = +2

Query: 35   RIADVSASKEENLVEVISEMLAELSKGHGVSTFEFIGSGVVDALLNYFSFGYSSKEKISE 214
            R+ D S +KEENL  V+SEMLAELSKG GVSTFEFIGSGVV ALLNYFS G+ SKE+ISE
Sbjct: 784  RLIDTSTNKEENLTAVLSEMLAELSKGDGVSTFEFIGSGVVAALLNYFSCGHFSKERISE 843

Query: 215  ANLSKLRQQAIRRYKSFVAVALPSGVHERNVAPMSILVQKLQNALSSLERFPVVLSHSAR 394
            ANLSK R QA++R+KSFVA+ALPS +  RN APM++LVQKLQNALSSLERFPVVLSHS+R
Sbjct: 844  ANLSKFRTQALKRFKSFVAIALPSNIDGRNAAPMTVLVQKLQNALSSLERFPVVLSHSSR 903

Query: 395  SSSGNMRLSYGLSALSQPFKL 457
            SSSGN RLS GLSALSQPFKL
Sbjct: 904  SSSGNARLSSGLSALSQPFKL 924


>ref|XP_002530820.1| hect ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223529612|gb|EEF31560.1| hect ubiquitin-protein
            ligase, putative [Ricinus communis]
          Length = 1899

 Score =  197 bits (501), Expect = 7e-49
 Identities = 105/138 (76%), Positives = 119/138 (86%)
 Frame = +2

Query: 44   DVSASKEENLVEVISEMLAELSKGHGVSTFEFIGSGVVDALLNYFSFGYSSKEKISEANL 223
            D S +KEE L+ VIS+MLAEL KG GVSTFEFIGSGVV ALLNYFS GY SKE+ISEANL
Sbjct: 793  DGSINKEEYLIGVISDMLAELRKGDGVSTFEFIGSGVVAALLNYFSCGYFSKERISEANL 852

Query: 224  SKLRQQAIRRYKSFVAVALPSGVHERNVAPMSILVQKLQNALSSLERFPVVLSHSARSSS 403
            SKLRQQA+RR+K FVA++LP   +  + APM++LVQKLQNALSSLERFPVVLSHS+RSS 
Sbjct: 853  SKLRQQALRRFKLFVALSLPYSTNAGSAAPMAVLVQKLQNALSSLERFPVVLSHSSRSSG 912

Query: 404  GNMRLSYGLSALSQPFKL 457
            G+ RLS GLSALSQPFKL
Sbjct: 913  GSARLSSGLSALSQPFKL 930


>ref|XP_004147040.1| PREDICTED: E3 ubiquitin-protein ligase UPL3-like [Cucumis sativus]
            gi|449489652|ref|XP_004158376.1| PREDICTED: E3
            ubiquitin-protein ligase UPL3-like [Cucumis sativus]
          Length = 1892

 Score =  189 bits (479), Expect = 3e-46
 Identities = 98/141 (69%), Positives = 115/141 (81%)
 Frame = +2

Query: 35   RIADVSASKEENLVEVISEMLAELSKGHGVSTFEFIGSGVVDALLNYFSFGYSSKEKISE 214
            R+ D+  +KEE L  VISEML EL K  GVSTFEFIGSGVV  LLNYFS GY SK +IS+
Sbjct: 777  RLDDIITNKEEYLTGVISEMLVELGKDDGVSTFEFIGSGVVGVLLNYFSCGYFSKGRISD 836

Query: 215  ANLSKLRQQAIRRYKSFVAVALPSGVHERNVAPMSILVQKLQNALSSLERFPVVLSHSAR 394
              L KLRQQ ++R+KSF++VALP  ++E  VAPM++LVQKLQ+ALSSLERFPVVLSHS+R
Sbjct: 837  VELPKLRQQVLKRFKSFISVALPGSINEGTVAPMTVLVQKLQSALSSLERFPVVLSHSSR 896

Query: 395  SSSGNMRLSYGLSALSQPFKL 457
            SSSG+ RLS GLS LSQPFKL
Sbjct: 897  SSSGSARLSSGLSVLSQPFKL 917


>ref|NP_195572.2| E3 ubiquitin-protein ligase UPL3 [Arabidopsis thaliana]
            gi|332661553|gb|AEE86953.1| E3 ubiquitin-protein ligase
            UPL3 [Arabidopsis thaliana]
          Length = 1794

 Score =  187 bits (476), Expect = 6e-46
 Identities = 99/140 (70%), Positives = 115/140 (82%)
 Frame = +2

Query: 38   IADVSASKEENLVEVISEMLAELSKGHGVSTFEFIGSGVVDALLNYFSFGYSSKEKISEA 217
            + D SASKEE L+ VISE+L E+SKG GVSTFEFIGSGVV ALLNYFS GY SKEKISE 
Sbjct: 714  LGDFSASKEEYLIGVISEILGEISKGDGVSTFEFIGSGVVAALLNYFSCGYFSKEKISEL 773

Query: 218  NLSKLRQQAIRRYKSFVAVALPSGVHERNVAPMSILVQKLQNALSSLERFPVVLSHSARS 397
            NL KLRQ+ +RR+K+F+ VALP   +E  V PM++L+QKLQNALSSLERFPVVLSH +RS
Sbjct: 774  NLPKLRQEGLRRFKAFLEVALPFDGNEGKVPPMTVLIQKLQNALSSLERFPVVLSHPSRS 833

Query: 398  SSGNMRLSYGLSALSQPFKL 457
             SG+ RLS GLSAL+ P KL
Sbjct: 834  LSGSARLSSGLSALAHPLKL 853


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