BLASTX nr result

ID: Panax21_contig00017760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017760
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278568.2| PREDICTED: AP3-complex subunit beta-A-like [...   277   2e-72
ref|XP_002533153.1| conserved hypothetical protein [Ricinus comm...   256   7e-66
ref|XP_003544215.1| PREDICTED: AP3-complex subunit beta-A-like [...   237   3e-60
ref|XP_003519348.1| PREDICTED: AP3-complex subunit beta-A-like [...   237   3e-60
ref|XP_003616410.1| AP-3 complex subunit beta-2 [Medicago trunca...   237   3e-60

>ref|XP_002278568.2| PREDICTED: AP3-complex subunit beta-A-like [Vitis vinifera]
            gi|296086225|emb|CBI31666.3| unnamed protein product
            [Vitis vinifera]
          Length = 1140

 Score =  277 bits (709), Expect = 2e-72
 Identities = 160/324 (49%), Positives = 203/324 (62%), Gaps = 9/324 (2%)
 Frame = -1

Query: 946  ILNAAVKVVLCAKGDDLCTLKKILSYVLELAQCDLNYDIRDRARVLNKLLSCYIGSHELE 767
            ILN AVKV+LCAKG DL T K +LSYVLELA+CDL+YD+RDRA +L +L+SCY+G  +LE
Sbjct: 588  ILNTAVKVLLCAKGKDLWTFKSVLSYVLELAKCDLSYDVRDRAHILKELMSCYLG-QDLE 646

Query: 766  EESKCQSQNKNLSCLLAERIFGEQQKLMSTEPTNYRFYLPGSLSQIVLHAAPGYDPLPEP 587
            EE+ C  Q K++  +LAE IF  Q+K MS EP N+RFYLPGSLSQIVLHAAPGY+PLP+P
Sbjct: 647  EETDCLPQ-KDIPQILAECIFRGQRKPMSPEPINFRFYLPGSLSQIVLHAAPGYEPLPKP 705

Query: 586  CSLTGDENSFCSNITGGV-------THSDSYEVDDPERALGSLDEENSSSYGSQVXXXXX 428
            CSL  ++     N+  G+       T+SDSYE DDP+    S +EE++S Y SQ      
Sbjct: 706  CSLLCNDLHQRLNVVQGIEGSGEGATNSDSYETDDPDMLSQSANEESTSGYSSQNSISRS 765

Query: 427  XXXXXXXXXXXGNNKTGSFINFSDVGNSAYENHNGNLEVHNAQSSSNDFGELMSKRALES 248
                        ++     I FSDVG S         +   +QS S+   ELMSK+ LES
Sbjct: 766  SGSDEPGSESEDDDNVDPLIQFSDVGIS------NKKQTGVSQSGSDSMEELMSKQTLES 819

Query: 247  WLDENPD-SSQNASRPSSLQXXXXXXXXXXXSERVKPKSHTLLDRANGNGLRVDYIFSSE 71
            WLDE P  S  N S+ S ++             RVKPK + LLD  NGNGLRV+Y FSSE
Sbjct: 820  WLDEQPGLSDPNLSKQSQVRRSSARISIGDIGGRVKPKIYGLLDPTNGNGLRVNYSFSSE 879

Query: 70   ISNKS-HFVCIEVYFTNCSTEPIS 2
            +S+ S   VC+E+ F NCS E +S
Sbjct: 880  VSSMSPQLVCVELIFENCSAESMS 903


>ref|XP_002533153.1| conserved hypothetical protein [Ricinus communis]
            gi|223527048|gb|EEF29234.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1121

 Score =  256 bits (653), Expect = 7e-66
 Identities = 155/320 (48%), Positives = 189/320 (59%), Gaps = 5/320 (1%)
 Frame = -1

Query: 946  ILNAAVKVVLCAKGDDLCTLKKILSYVLELAQCDLNYDIRDRARVLNKLLSCYIGSHELE 767
            ILN  VKV+  AK +DLCTLKK+ SYVLELA+ DLNY++RDRAR+L KLLS  +GS E+E
Sbjct: 588  ILNTIVKVLSGAKEEDLCTLKKLGSYVLELAEFDLNYNVRDRARLLKKLLSSKLGSQEIE 647

Query: 766  EESKCQSQNKNLSCLLAERIFGEQQKLMSTEPTNYRFYLPGSLSQIVLHAAPGYDPLPEP 587
            + +    Q ++LS +LAE  F  + K  S+EP NYR YLPGSLSQIVLH APGY+PLP P
Sbjct: 648  DNTNSPHQVEDLSHVLAECFFRGKTKHSSSEPINYRIYLPGSLSQIVLHGAPGYEPLPNP 707

Query: 586  CSLTGDENSFCSNITGGVTHSDSYEVDDPERALGSLDEENSSSYGSQ---VXXXXXXXXX 416
            CS+  DE S  SN +   T       D      GS D+E +  Y S+             
Sbjct: 708  CSILHDELSHLSN-SMLETDMSGEGTDSSGTISGSSDQETALGYSSEHCNTESSGDDAGD 766

Query: 415  XXXXXXXGNNKTGSFINFSDVGNSAYENHNGNLEVHNAQSSSNDFGELMSKRALESWLDE 236
                     N     I  SDVG       +G++     Q +S+D GELMSKR+LESWLDE
Sbjct: 767  ETGSVSGSGNDADPLIQVSDVG-------DGHINQTGVQPASSDLGELMSKRSLESWLDE 819

Query: 235  NPD-SSQNASRPSSLQXXXXXXXXXXXSERVKPKSHTLLDRANGNGLRVDYIFSSEISNK 59
             PD S+   S  S +              RVKP S+ LLD ANGNGL+VDY FSSEIS+ 
Sbjct: 820  QPDLSNPGTSERSQVYRSSARISIRDIGSRVKPNSYGLLDPANGNGLKVDYSFSSEISSI 879

Query: 58   SH-FVCIEVYFTNCSTEPIS 2
            SH  VC+EV F NCSTE IS
Sbjct: 880  SHLLVCVEVSFENCSTETIS 899


>ref|XP_003544215.1| PREDICTED: AP3-complex subunit beta-A-like [Glycine max]
          Length = 1129

 Score =  237 bits (604), Expect = 3e-60
 Identities = 147/320 (45%), Positives = 191/320 (59%), Gaps = 7/320 (2%)
 Frame = -1

Query: 943  LNAAVKVVLCAKGDDLCTLKKILSYVLELAQCDLNYDIRDRARVLNKLLSCYIGSHELEE 764
            LN   KV+LC KG+D+ T++K+ SYV+ELA+ DLNYDIRDR+R L KLLS  + S   EE
Sbjct: 586  LNTTAKVLLCIKGEDILTVRKVWSYVIELAERDLNYDIRDRSRFLKKLLSSNLESQHGEE 645

Query: 763  ESKCQSQNKNLSCLLAERIFGEQQKLMS--TEPTNYRFYLPGSLSQIVLHAAPGYDPLPE 590
            E+  +SQ ++ S +LAE IFG Q K M+  +EP +YRFYLPGSLSQ+V HAAPGY+PLP+
Sbjct: 646  ENS-ESQKRDQSYILAECIFGGQTKAMTVPSEPIDYRFYLPGSLSQLVFHAAPGYEPLPK 704

Query: 589  PCSLTGDENSFCSNITGGVTHSDSYEVDDPERALGSLDEENSSSYGSQVXXXXXXXXXXX 410
            PCSL   +     +   G   SDS E DD   + GSLDE ++S Y S+            
Sbjct: 705  PCSLPYTD----LDQYDGAAKSDSDEEDDTGTS-GSLDEGSASDYSSEQSITASGEASGS 759

Query: 409  XXXXXGN---NKTGSFINFSDVGNSAYENHNGNLEVHNAQSSSNDFGELMSKRALESWLD 239
                 GN   +     I  SD GN     ++G      A S +  F +LMS ++LESWLD
Sbjct: 760  DESVSGNEGEDNADPLIQISDTGNVCEYQNSG------APSGTAGFRDLMSTKSLESWLD 813

Query: 238  ENPDSSQNAS-RPSSLQXXXXXXXXXXXSERVKPKSHTLLDRANGNGLRVDYIFSSEISN 62
            E   SS+ +    S ++             RVKPK +TLLD  NGNGL+V+Y FSSE S+
Sbjct: 814  EPARSSKGSEIEQSQVRRSSARITIGNIGNRVKPKCYTLLDPVNGNGLKVNYSFSSETSS 873

Query: 61   -KSHFVCIEVYFTNCSTEPI 5
              SH VC+EV F NCS EP+
Sbjct: 874  ISSHLVCLEVLFENCSLEPM 893


>ref|XP_003519348.1| PREDICTED: AP3-complex subunit beta-A-like [Glycine max]
          Length = 1129

 Score =  237 bits (604), Expect = 3e-60
 Identities = 147/321 (45%), Positives = 195/321 (60%), Gaps = 7/321 (2%)
 Frame = -1

Query: 946  ILNAAVKVVLCAKGDDLCTLKKILSYVLELAQCDLNYDIRDRARVLNKLLSCYIGSHELE 767
            ILN   KV+LC KG+D+ T++KI +Y++ELA+CDLNYDIRDR+R L KLLS  + S   E
Sbjct: 585  ILNTTAKVLLCIKGEDILTVRKIWTYIIELAECDLNYDIRDRSRFLKKLLSSNLESQHGE 644

Query: 766  EESKCQSQNKNLSCLLAERIFGEQQKLMS--TEPTNYRFYLPGSLSQIVLHAAPGYDPLP 593
            EE+  +SQ ++ S +L+E IFG Q K ++  +EP +YRFYLPGSLSQ+V HAAPGY+PLP
Sbjct: 645  EENS-ESQKRDQSHILSECIFGGQTKAVTVPSEPIDYRFYLPGSLSQLVFHAAPGYEPLP 703

Query: 592  EPCSLTGDENSFCSNITGGVTHSDSYEVDDPERALGSLDEENSSSYGSQVXXXXXXXXXX 413
            +PCSL   +     +   G + SDS E D+   + GSLDEE++S Y S+           
Sbjct: 704  KPCSLPYTD----LDQYDGASKSDSDEEDNTGTS-GSLDEESASDYSSEQSITASGEVTG 758

Query: 412  XXXXXXGN---NKTGSFINFSDVGNSAYENHNGNLEVHNAQSSSNDFGELMSKRALESWL 242
                  GN   +     I  SD  N   EN NG      A S +  F +LMS ++LESWL
Sbjct: 759  SDESVSGNEGEDNADPLIQISDTVN-VCENQNG-----GAPSGAAGFRDLMSTKSLESWL 812

Query: 241  DENPDSSQNAS-RPSSLQXXXXXXXXXXXSERVKPKSHTLLDRANGNGLRVDYIFSSEIS 65
            DE   SS+ +    S ++             RVKPK ++LLD  NGNGL+V+Y FSSE S
Sbjct: 813  DEPARSSKGSEIEQSRVRRSSARITIGNIGGRVKPKCYSLLDPVNGNGLKVNYSFSSETS 872

Query: 64   N-KSHFVCIEVYFTNCSTEPI 5
            +  SH VC+EV F NCS EP+
Sbjct: 873  SISSHLVCLEVLFENCSLEPM 893


>ref|XP_003616410.1| AP-3 complex subunit beta-2 [Medicago truncatula]
            gi|355517745|gb|AES99368.1| AP-3 complex subunit beta-2
            [Medicago truncatula]
          Length = 1126

 Score =  237 bits (604), Expect = 3e-60
 Identities = 150/321 (46%), Positives = 189/321 (58%), Gaps = 7/321 (2%)
 Frame = -1

Query: 946  ILNAAVKVVLCAKGDDLCTLKKILSYVLELAQCDLNYDIRDRARVLNKLLSCYIGSHELE 767
            ILN   KV LC KG+D  TL+KI +YV+ELA+ DLNYDIRDR+R L KLLS  + S  +E
Sbjct: 585  ILNTITKVSLCIKGEDSWTLRKIWTYVIELAERDLNYDIRDRSRFLKKLLSSNLESQNVE 644

Query: 766  EESKCQSQNKNLSCLLAERIFGEQQKLMS--TEPTNYRFYLPGSLSQIVLHAAPGYDPLP 593
            EE+      K+ S +LAE IFG Q K ++  +EP N RFYLPGSLSQ+V HAAPGY+PLP
Sbjct: 645  EEN--SESRKDQSSVLAECIFGGQTKTVTVPSEPINDRFYLPGSLSQLVFHAAPGYEPLP 702

Query: 592  EPCSLTGDENSFCSNITGGVTHSDSYEVDDPERALGSLDEENSSSYGSQ---VXXXXXXX 422
            +PCSL   +         G  +SDS EVDDP  + GS D+EN+S Y S+           
Sbjct: 703  KPCSLPYIDQ------YDGAVNSDSEEVDDPGSS-GSSDDENASDYSSEQSISGSSEGSG 755

Query: 421  XXXXXXXXXGNNKTGSFINFSDVGNSAYENHNGNLEVHNAQSSSNDFGELMSKRALESWL 242
                     G+N     I  S+  N   EN NG        S S+ F +LMS ++LESWL
Sbjct: 756  SNETVSGDEGDNNDDPLIQISETSN-VNENQNG-----GDHSGSSGFNDLMSTKSLESWL 809

Query: 241  DENPDSSQNA-SRPSSLQXXXXXXXXXXXSERVKPKSHTLLDRANGNGLRVDYIFSSEIS 65
            DE   SS+ + +  S ++             RVKPK +TLLD ANG GL V+Y FSSE S
Sbjct: 810  DEPSKSSKGSETEQSQVRKSSARITIGDIGSRVKPKCYTLLDPANGKGLMVNYSFSSETS 869

Query: 64   N-KSHFVCIEVYFTNCSTEPI 5
            +  SH VC+EV F NCS EP+
Sbjct: 870  SISSHLVCLEVLFENCSLEPM 890


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