BLASTX nr result
ID: Panax21_contig00017751
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00017751
(1418 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 430 e-118
ref|XP_002525676.1| transcription initiation factor brf1, putati... 385 e-104
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ... 376 e-102
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ... 375 e-101
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ... 370 e-100
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 430 bits (1106), Expect = e-118
Identities = 249/472 (52%), Positives = 306/472 (64%), Gaps = 4/472 (0%)
Frame = -1
Query: 1418 YLLIDFAEFLGRNVYELGAVYXXXXXXXXLVEHENVQKPVDPSLFIHRFSHRLLGQKNED 1239
+LLIDF+E L NVY LGAV+ L EH VQKPVDPSLFIHRF+ L G+ N
Sbjct: 134 FLLIDFSEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFIHRFAAGLPGETNMG 193
Query: 1238 VTKTALKIIASMKRDWMQTGRKPSGLCGAALYISALSHGHKYTKSHIVKIVHICEATLTK 1059
V+KTAL+IIASMKRDW+QTGRKPSGLCGAALYISALS+G K +K+ IVKIVHICEATLTK
Sbjct: 194 VSKTALRIIASMKRDWLQTGRKPSGLCGAALYISALSYGLKCSKTDIVKIVHICEATLTK 253
Query: 1058 RLIEFENTESGSLTIEEFTKKAVELEVERRSTKQSAAGLKVSEGSELLCEHKGA--LAFA 885
RLIEFENTESGSLTIEEF KA ELE E STKQS G V ELLCEHKG+ FA
Sbjct: 254 RLIEFENTESGSLTIEEFNMKAEELEKEYSSTKQSNIGSTVPGKGELLCEHKGSGKPPFA 313
Query: 884 HGLCVKCYEEFISISGGLDGGSEPPAFQRAQQERMAKEYAEENSDSSYDTEALLRQNNSN 705
HGLC CY EFI +SGGL+GGSEPPAFQRA+++RMAK AEEN+D SN
Sbjct: 314 HGLCEICYGEFIKLSGGLEGGSEPPAFQRAERDRMAKAAAEENAD-------------SN 360
Query: 704 CLNSGKKLDSLEASRDEDVHLTEGDIGSGGATKHVANDDDAFDKVHDSDVLSNKACDESE 525
+ K S + +E L E G + K + D+ A +H +D + A DESE
Sbjct: 361 QIQLDKGSSSPDVCGNESSKLAEPK-SIGASDKQASIDEGAPSDLHGADDENANAGDESE 419
Query: 524 TLSDIDDLEVDGYIHNEEEQNYKKIIWEELNREYIEEQLXXXXXXXXXXXXXXANLRNCP 345
+LSDIDD+EVDGY+HNE+E+ +KKIIWE +N+EY+EEQ A+ ++ P
Sbjct: 420 SLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYLEEQAAKEAAAAAAKEAYEASFKDNP 479
Query: 344 EGMXXXXXXXXXXXXXXXXXXXXXXXXXXAEARNSTAPQTAAEATRQMLAKKKLDSKINY 165
EG+ AEA+N+ QTAAEATRQML KK+L SKINY
Sbjct: 480 EGLKAAQELAAATAAAVAKSRKERQQKRAAEAKNTVPAQTAAEATRQMLTKKRLSSKINY 539
Query: 164 AVLDDLFEESLAPQNPKKSRIDN-VLNNNNKTKVES-EYRNEDTKLGSEDEY 15
VL+ LF++S+ +NPKK R ++ NN++K + + + E+ L EDE+
Sbjct: 540 DVLEKLFDDSVPSENPKKIRTESQTENNDHKAPISNKKLEPEEDDLAPEDEF 591
>ref|XP_002525676.1| transcription initiation factor brf1, putative [Ricinus communis]
gi|223534976|gb|EEF36659.1| transcription initiation
factor brf1, putative [Ricinus communis]
Length = 625
Score = 385 bits (989), Expect = e-104
Identities = 225/479 (46%), Positives = 299/479 (62%), Gaps = 7/479 (1%)
Frame = -1
Query: 1418 YLLIDFAEFLGRNVYELGAVYXXXXXXXXLVEHENVQKPVDPSLFIHRFSHRLLGQKNED 1239
YLLIDF+ FL N+Y LGAV+ L EH QK +DPS+FIH+++ L G KN+D
Sbjct: 133 YLLIDFSNFLRINIYVLGAVFLQLCKVLNLTEHSICQKLLDPSIFIHKYTASLSGGKNKD 192
Query: 1238 VTKTALKIIASMKRDWMQTGRKPSGLCGAALYISALSHGHKYTKSHIVKIVHICEATLTK 1059
++ +AL IIASM RDWMQTGR+PSGL GAALYI+ALSHG ++ I+K+VH+C+ATL+K
Sbjct: 193 ISDSALTIIASMNRDWMQTGRRPSGLWGAALYIAALSHGLTCSRKDILKLVHVCDATLSK 252
Query: 1058 RLIEFENTESGSLTIEEFTKKAVELEVERRSTKQSAAGLKVSEGSELLCEHKGA--LAFA 885
RL+EFENTESGSLTIEE KA EL ST QS LK S ELLC+HKG + +A
Sbjct: 253 RLVEFENTESGSLTIEEINAKAEEL--RESSTDQSNFVLKGSSSKELLCQHKGTSRIPYA 310
Query: 884 HGLCVKCYEEFISISGGLDGGSEPPAFQRAQQERMAKEYAEENSDSSYDTEALLRQNNSN 705
+GLC CYE FI G DGGS+PPAFQ+A++ R +EN A+ N+SN
Sbjct: 311 YGLCKGCYEYFI----GFDGGSDPPAFQQAERRR------KEN------LSAMNNNNDSN 354
Query: 704 CLNS-----GKKLDSLEASRDEDVHLTEGDIGSGGATKHVANDDDAFDKVHDSDVLSNKA 540
+++ K+L+S A RDE + L++ +G A H+ DD + K+HD D +S+KA
Sbjct: 355 SVSTMPFLFEKELNSQHADRDEQL-LSKKAESTGEAALHLPADDGGYSKLHDDDDMSSKA 413
Query: 539 CDESETLSDIDDLEVDGYIHNEEEQNYKKIIWEELNREYIEEQLXXXXXXXXXXXXXXAN 360
DES+ SDIDD EVDGY+HNEEE +KKIIWEE+NREY+EEQ A
Sbjct: 414 LDESDNFSDIDDAEVDGYLHNEEEAQFKKIIWEEMNREYLEEQAAKEAVAAAAKEAWEAK 473
Query: 359 LRNCPEGMXXXXXXXXXXXXXXXXXXXXXXXXXXAEARNSTAPQTAAEATRQMLAKKKLD 180
++CPE M AEA+NS Q+A+EA RQML KK+L
Sbjct: 474 FKDCPEEMQAARELEAAVAAALAKSKKEKQQKRAAEAKNSVPAQSASEAARQMLTKKRLS 533
Query: 179 SKINYAVLDDLFEESLAPQNPKKSRIDNVLNNNNKTKVESEYRNEDTKLGSEDEYEDVA 3
SKINY VL+ LF+E ++PKK R ++ + + K +++ RN+D G+++E E+ A
Sbjct: 534 SKINYDVLEKLFDEP-GSKDPKKLRTESESDTDEKFP-QTDDRNDDLGPGNKNEKEEDA 590
>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 643
Score = 376 bits (965), Expect = e-102
Identities = 235/511 (45%), Positives = 290/511 (56%), Gaps = 41/511 (8%)
Frame = -1
Query: 1418 YLLIDFAEFLGRNVYELGAVYXXXXXXXXLVEHENVQKPVDPSLFIHRFSHRLLGQKNED 1239
YLLIDF+ +L NVY LGAV+ L EH VQKPVDPSLFI +F+ LLG +D
Sbjct: 134 YLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIDKFTQCLLGGTKDD 193
Query: 1238 -----VTKTALKIIASMKRDWMQTGRKPSGLCGAALYISALSHGHKYTKSHIVKIVHICE 1074
V+KTALKII SMKRDWMQTGRKPSGLCGAALYISALS+G K TKS I+KIVHIC+
Sbjct: 194 GMKKEVSKTALKIITSMKRDWMQTGRKPSGLCGAALYISALSNGVKCTKSDIIKIVHICD 253
Query: 1073 ATLTKRLIEFENTESGSLT--------------------------------IEEFTKKAV 990
ATLTKRLIEFENTESGSLT +EEF A
Sbjct: 254 ATLTKRLIEFENTESGSLTNTCLLILVQALQHIDLLEYLPSGHADISEKMNMEEFIVMAD 313
Query: 989 ELEVERRSTKQSAAGLKVSEGSELLCEHKGALA--FAHGLCVKCYEEFISISGGLDGGSE 816
+L+ T ++ L E+LC HK +A GLC CY++F+ +SGGLDGGS
Sbjct: 314 KLKGSNSYTNNGSSALS----DEVLCVHKNECQKPYALGLCRSCYDDFVELSGGLDGGSN 369
Query: 815 PPAFQRAQQERMAKEYAEENSDSSYDTEAL--LRQNNSNCLNSGKKLDSLEASRDEDVHL 642
PPAFQ A++ERM K EE SD D A+ Q C N+ K+ D++ E
Sbjct: 370 PPAFQSAEKERMEKATVEEGSD---DCSAIGKFSQGLKPCNNTEKESDNVHVDASETASF 426
Query: 641 TEGDIGSGGATKHVANDDDAFDKVHDSDVLSNKACDESETLSDIDDLEVDGYIHNEEEQN 462
E + G A + DDD +KV +D L A D+SE SDIDD+EVDGY+HNEEE++
Sbjct: 427 KEAE-AKGTADEQRGPDDDV-NKV-GADDLGTCASDDSENWSDIDDVEVDGYLHNEEEKH 483
Query: 461 YKKIIWEELNREYIEEQLXXXXXXXXXXXXXXANLRNCPEGMXXXXXXXXXXXXXXXXXX 282
YKKIIWEE+NREY+EEQ AN +NC E +
Sbjct: 484 YKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAKDLAEAAAAAVAKSR 543
Query: 281 XXXXXXXXAEARNSTAPQTAAEATRQMLAKKKLDSKINYAVLDDLFEESLAPQNPKKSRI 102
AEA+N+T QTAAEATRQML KK+L SKINY VLD LF+ES + K +
Sbjct: 544 KERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSAKKKC 603
Query: 101 DNVLNNNNKTKVESEYRNEDTKLGSEDEYED 9
+ KT+ + + +T E++Y+D
Sbjct: 604 EEQAEETEKTR--NTTKEFETTEEQEEDYDD 632
>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
sativus]
Length = 663
Score = 375 bits (962), Expect = e-101
Identities = 235/511 (45%), Positives = 289/511 (56%), Gaps = 41/511 (8%)
Frame = -1
Query: 1418 YLLIDFAEFLGRNVYELGAVYXXXXXXXXLVEHENVQKPVDPSLFIHRFSHRLLGQKNED 1239
YLLIDF+ +L NVY LGAV+ L EH VQKPVDPSLFI +F+ LLG +D
Sbjct: 134 YLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIDKFTQCLLGGTKDD 193
Query: 1238 -----VTKTALKIIASMKRDWMQTGRKPSGLCGAALYISALSHGHKYTKSHIVKIVHICE 1074
V+KTALKII SMKRDWMQTGRKPSGLCGAALYISALS+G K TKS I+KIVHIC+
Sbjct: 194 GMKKEVSKTALKIITSMKRDWMQTGRKPSGLCGAALYISALSNGVKCTKSDIIKIVHICD 253
Query: 1073 ATLTKRLIEFENTESGSLT--------------------------------IEEFTKKAV 990
ATLTKRLIEFENTESGSLT +EEF A
Sbjct: 254 ATLTKRLIEFENTESGSLTNTCLLILVQALQHIDLLEYLPSGHADISEKMNMEEFIVMAD 313
Query: 989 ELEVERRSTKQSAAGLKVSEGSELLCEHKGALA--FAHGLCVKCYEEFISISGGLDGGSE 816
+L+ T + L E+LC HK +A GLC CY++F+ +SGGLDGGS
Sbjct: 314 KLKGSNSYTNNGSNALS----DEVLCVHKNECQKPYALGLCRSCYDDFVELSGGLDGGSN 369
Query: 815 PPAFQRAQQERMAKEYAEENSDSSYDTEAL--LRQNNSNCLNSGKKLDSLEASRDEDVHL 642
PPAFQ A++ERM K EE SD D A+ Q C N+ K+ D++ E
Sbjct: 370 PPAFQSAEKERMEKATVEEGSD---DCSAIGKFSQGLKPCNNTEKESDNVHVDASETASF 426
Query: 641 TEGDIGSGGATKHVANDDDAFDKVHDSDVLSNKACDESETLSDIDDLEVDGYIHNEEEQN 462
E + G A + DDD +KV +D L A D+SE SDIDD+EVDGY+HNEEE++
Sbjct: 427 KEAE-AKGTADEQRGPDDDV-NKV-GADDLGTCASDDSENWSDIDDVEVDGYLHNEEEKH 483
Query: 461 YKKIIWEELNREYIEEQLXXXXXXXXXXXXXXANLRNCPEGMXXXXXXXXXXXXXXXXXX 282
YKKIIWEE+NREY+EEQ AN +NC E +
Sbjct: 484 YKKIIWEEMNREYLEEQAAKDAAAAAAKKAYEANFQNCSEDLKAAKDLAEAAAAAVAKSR 543
Query: 281 XXXXXXXXAEARNSTAPQTAAEATRQMLAKKKLDSKINYAVLDDLFEESLAPQNPKKSRI 102
AEA+N+T QTAAEATRQML KK+L SKINY VLD LF+ES + K +
Sbjct: 544 KERQRKRAAEAKNATPAQTAAEATRQMLNKKRLSSKINYDVLDKLFDESAGMEPSAKKKC 603
Query: 101 DNVLNNNNKTKVESEYRNEDTKLGSEDEYED 9
+ KT+ + + +T E++Y+D
Sbjct: 604 EEQAEETEKTR--NTTKEFETTEEQEEDYDD 632
>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
vinifera]
Length = 529
Score = 370 bits (950), Expect = e-100
Identities = 208/363 (57%), Positives = 248/363 (68%), Gaps = 2/363 (0%)
Frame = -1
Query: 1418 YLLIDFAEFLGRNVYELGAVYXXXXXXXXLVEHENVQKPVDPSLFIHRFSHRLLGQKNED 1239
+LLIDF+E L NVY LGAV+ L EH VQKPVDPSLFIHRF+ L G+ N
Sbjct: 134 FLLIDFSEHLRINVYVLGAVFLQLCKLLSLEEHPIVQKPVDPSLFIHRFAAGLPGETNMG 193
Query: 1238 VTKTALKIIASMKRDWMQTGRKPSGLCGAALYISALSHGHKYTKSHIVKIVHICEATLTK 1059
V+KTAL+IIASMKRDW+QTGRKPSGLCGAALYISALS+G K +K+ IVKIVHICEATLTK
Sbjct: 194 VSKTALRIIASMKRDWLQTGRKPSGLCGAALYISALSYGLKCSKTDIVKIVHICEATLTK 253
Query: 1058 RLIEFENTESGSLTIEEFTKKAVELEVERRSTKQSAAGLKVSEGSELLCEHKGA--LAFA 885
RLIEFENTESGSLTIEEF KA ELE E STKQS G V ELLCEHKG+ FA
Sbjct: 254 RLIEFENTESGSLTIEEFNMKAEELEKEYSSTKQSNIGSTVPGKGELLCEHKGSGKPPFA 313
Query: 884 HGLCVKCYEEFISISGGLDGGSEPPAFQRAQQERMAKEYAEENSDSSYDTEALLRQNNSN 705
HGLC CY EFI +SGGL+GGSEPPAFQRA+++RMAK AEEN+D SN
Sbjct: 314 HGLCEICYGEFIKLSGGLEGGSEPPAFQRAERDRMAKAAAEENAD-------------SN 360
Query: 704 CLNSGKKLDSLEASRDEDVHLTEGDIGSGGATKHVANDDDAFDKVHDSDVLSNKACDESE 525
+ K S + +E L E G + K + D+ A +H +D + A DESE
Sbjct: 361 QIQLDKGSSSPDVCGNESSKLAEPK-SIGASDKQASIDEGAPSDLHGADDENANAGDESE 419
Query: 524 TLSDIDDLEVDGYIHNEEEQNYKKIIWEELNREYIEEQLXXXXXXXXXXXXXXANLRNCP 345
+LSDIDD+EVDGY+HNE+E+ +KKIIWE +N+EY+EEQ A+ ++ P
Sbjct: 420 SLSDIDDVEVDGYLHNEKEKQFKKIIWEAMNKEYLEEQAAKEAAAAAAKEAYEASFKDNP 479
Query: 344 EGM 336
EG+
Sbjct: 480 EGL 482