BLASTX nr result

ID: Panax21_contig00017742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017742
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280518.1| PREDICTED: pentatricopeptide repeat-containi...   358   1e-96
emb|CAN68786.1| hypothetical protein VITISV_024068 [Vitis vinife...   343   5e-92
ref|XP_003552899.1| PREDICTED: pentatricopeptide repeat-containi...   336   6e-90
ref|XP_003530344.1| PREDICTED: pentatricopeptide repeat-containi...   336   6e-90
ref|XP_003589614.1| Pentatricopeptide repeat-containing protein ...   335   8e-90

>ref|XP_002280518.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
          Length = 248

 Score =  358 bits (919), Expect = 1e-96
 Identities = 171/201 (85%), Positives = 189/201 (94%)
 Frame = +2

Query: 152 IWRRKKEMGKEGLIIAKELKRLQSNPVRFDRFMKSHVSRLLKSDLVAVLAEFQRQDLVFL 331
           IWRRKKEMGKEGLI AKELKRL+S+PVRFDRFM+S VSRLL+SDLV+VLAEFQRQD VFL
Sbjct: 48  IWRRKKEMGKEGLIAAKELKRLRSDPVRFDRFMRSSVSRLLRSDLVSVLAEFQRQDQVFL 107

Query: 332 SMKLYDVVRKEIWYRPDMFFYRDMLMMLARNKKVNEVKRVWEDLKREEVHFDQHTFGDII 511
           SMKLYDVVRKEIWYRPDM+FYRDMLMMLARNKKV+E KRVWEDLKREEV FDQHTFGDI+
Sbjct: 108 SMKLYDVVRKEIWYRPDMYFYRDMLMMLARNKKVDETKRVWEDLKREEVLFDQHTFGDIV 167

Query: 512 RVFLDSGLPSEAMDIYDEMRQSPDPPLSLPYRVMLKGLLPFPELRDKVKDDFLELFPNMV 691
           R FLD GLPSEAMDIY+EMR+SPDPPLSLPYRV+LKGLLP+PELR+KVKDDFLELFP M+
Sbjct: 168 RAFLDGGLPSEAMDIYEEMRRSPDPPLSLPYRVILKGLLPYPELREKVKDDFLELFPGMI 227

Query: 692 IYDPPEDLFEDQQWSKDNEDD 754
           +YDPPEDLFED+    ++EDD
Sbjct: 228 VYDPPEDLFEDEDGRTESEDD 248


>emb|CAN68786.1| hypothetical protein VITISV_024068 [Vitis vinifera]
           gi|296083864|emb|CBI24252.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  343 bits (879), Expect = 5e-92
 Identities = 164/194 (84%), Positives = 182/194 (93%)
 Frame = +2

Query: 173 MGKEGLIIAKELKRLQSNPVRFDRFMKSHVSRLLKSDLVAVLAEFQRQDLVFLSMKLYDV 352
           MGKEGLI AKELKRL+S+PVRFDRFM+S VSRLL+SDLV+VLAEFQRQD VFLSMKLYDV
Sbjct: 1   MGKEGLIAAKELKRLRSDPVRFDRFMRSSVSRLLRSDLVSVLAEFQRQDQVFLSMKLYDV 60

Query: 353 VRKEIWYRPDMFFYRDMLMMLARNKKVNEVKRVWEDLKREEVHFDQHTFGDIIRVFLDSG 532
           VRKEIWYRPDM+FYRDMLMMLARNKKV+E KRVWEDLKREEV FDQHTFGDI+R FLD G
Sbjct: 61  VRKEIWYRPDMYFYRDMLMMLARNKKVDETKRVWEDLKREEVLFDQHTFGDIVRAFLDGG 120

Query: 533 LPSEAMDIYDEMRQSPDPPLSLPYRVMLKGLLPFPELRDKVKDDFLELFPNMVIYDPPED 712
           LPSEAMDIY+EMR+SPDPPLSLPYRV+LKGLLP+PELR+KVKDDFLELFP M++YDPPED
Sbjct: 121 LPSEAMDIYEEMRRSPDPPLSLPYRVILKGLLPYPELREKVKDDFLELFPGMIVYDPPED 180

Query: 713 LFEDQQWSKDNEDD 754
           LFED+    ++EDD
Sbjct: 181 LFEDEDGRTESEDD 194


>ref|XP_003552899.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Glycine max]
          Length = 234

 Score =  336 bits (861), Expect = 6e-90
 Identities = 158/200 (79%), Positives = 182/200 (91%)
 Frame = +2

Query: 152 IWRRKKEMGKEGLIIAKELKRLQSNPVRFDRFMKSHVSRLLKSDLVAVLAEFQRQDLVFL 331
           IWRRKKEMGKEGL++AKELKR +S+PVR DRF++S VSRLLKSDLVAVLAEFQRQ+  FL
Sbjct: 31  IWRRKKEMGKEGLVVAKELKRFRSDPVRLDRFIRSSVSRLLKSDLVAVLAEFQRQNQFFL 90

Query: 332 SMKLYDVVRKEIWYRPDMFFYRDMLMMLARNKKVNEVKRVWEDLKREEVHFDQHTFGDII 511
            +KLYD+VRKEIWYRPDMFFYRDMLMMLARNK+V E K+VW DLK EEV FDQHTFGDII
Sbjct: 91  CVKLYDIVRKEIWYRPDMFFYRDMLMMLARNKRVEEAKKVWGDLKTEEVLFDQHTFGDII 150

Query: 512 RVFLDSGLPSEAMDIYDEMRQSPDPPLSLPYRVMLKGLLPFPELRDKVKDDFLELFPNMV 691
           R FLD+GLPSEAMDIY+EMRQSP+PPLSLP+RV+LKGL+P+PELR+KVKDDFLE+FP M+
Sbjct: 151 RAFLDNGLPSEAMDIYEEMRQSPEPPLSLPFRVILKGLIPYPELREKVKDDFLEIFPGMI 210

Query: 692 IYDPPEDLFEDQQWSKDNED 751
           IYDPPEDLFED +   D ++
Sbjct: 211 IYDPPEDLFEDNKQHNDRDN 230


>ref|XP_003530344.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Glycine max]
          Length = 232

 Score =  336 bits (861), Expect = 6e-90
 Identities = 158/200 (79%), Positives = 182/200 (91%)
 Frame = +2

Query: 152 IWRRKKEMGKEGLIIAKELKRLQSNPVRFDRFMKSHVSRLLKSDLVAVLAEFQRQDLVFL 331
           IWRRKKEMGKEGL++AKELKR +S+PVR DRF++S VSRLLKSDLVAVLAEFQRQ+  FL
Sbjct: 33  IWRRKKEMGKEGLVVAKELKRFRSDPVRLDRFIRSSVSRLLKSDLVAVLAEFQRQNQFFL 92

Query: 332 SMKLYDVVRKEIWYRPDMFFYRDMLMMLARNKKVNEVKRVWEDLKREEVHFDQHTFGDII 511
            +KLYD+VRKEIWYRPDMFFYRDMLMMLARNK+V E K+VW DLK EEV FDQHTFGDII
Sbjct: 93  CVKLYDIVRKEIWYRPDMFFYRDMLMMLARNKRVEEAKKVWGDLKTEEVLFDQHTFGDII 152

Query: 512 RVFLDSGLPSEAMDIYDEMRQSPDPPLSLPYRVMLKGLLPFPELRDKVKDDFLELFPNMV 691
           R FLD+GLPSEAMDIY+EMRQSP+PPLSLP+RV+LKGL+P+PELR+KVKDDFLE+FP M+
Sbjct: 153 RAFLDNGLPSEAMDIYEEMRQSPEPPLSLPFRVILKGLIPYPELREKVKDDFLEIFPGMI 212

Query: 692 IYDPPEDLFEDQQWSKDNED 751
           IYDPPEDLFED +   D ++
Sbjct: 213 IYDPPEDLFEDNKQHNDRDN 232


>ref|XP_003589614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478662|gb|AES59865.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 232

 Score =  335 bits (860), Expect = 8e-90
 Identities = 157/200 (78%), Positives = 184/200 (92%)
 Frame = +2

Query: 152 IWRRKKEMGKEGLIIAKELKRLQSNPVRFDRFMKSHVSRLLKSDLVAVLAEFQRQDLVFL 331
           IWRRKKE+GKEGLII KELKRLQS+PVR DRF++S+VSRLLKSDLV+VL EF RQD VFL
Sbjct: 29  IWRRKKELGKEGLIITKELKRLQSDPVRLDRFVRSNVSRLLKSDLVSVLFEFHRQDNVFL 88

Query: 332 SMKLYDVVRKEIWYRPDMFFYRDMLMMLARNKKVNEVKRVWEDLKREEVHFDQHTFGDII 511
           SMKLYD+VRKEIWYRPDMFFYRDMLMMLARNK+V+E KRVW+DLK E V FDQHTFGDI+
Sbjct: 89  SMKLYDIVRKEIWYRPDMFFYRDMLMMLARNKRVDETKRVWDDLKGEGVLFDQHTFGDIV 148

Query: 512 RVFLDSGLPSEAMDIYDEMRQSPDPPLSLPYRVMLKGLLPFPELRDKVKDDFLELFPNMV 691
           R +LDSG+PSEAMDIY+EMRQSP+PPLSLP+RV+LKGL+P+PELR+K+KDDFLE+FP+M+
Sbjct: 149 RAYLDSGMPSEAMDIYEEMRQSPEPPLSLPFRVILKGLIPYPELREKIKDDFLEVFPDMI 208

Query: 692 IYDPPEDLFEDQQWSKDNED 751
           IYDPPEDLF+D +   D  +
Sbjct: 209 IYDPPEDLFDDHEKHDDESN 228


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