BLASTX nr result

ID: Panax21_contig00017739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00017739
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|2...   234   8e-60
ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245...   225   4e-57
ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|2...   217   8e-55
ref|XP_002519830.1| DNA binding protein, putative [Ricinus commu...   216   2e-54
ref|XP_004148734.1| PREDICTED: uncharacterized protein LOC101204...   199   2e-49

>ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|222870276|gb|EEF07407.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  234 bits (596), Expect = 8e-60
 Identities = 131/180 (72%), Positives = 138/180 (76%), Gaps = 5/180 (2%)
 Frame = +1

Query: 10  DGSSP--SSGFRAGGFSIEPARKKRGRPRKYSPDGNIALGLSPSPVTPISTVGHGDSGGG 183
           DGSSP  SSG R   FSIEPA+KKRGRPRKY+PDGNIALGLSP+PV    + GH DSGGG
Sbjct: 83  DGSSPTSSSGMR---FSIEPAKKKRGRPRKYTPDGNIALGLSPTPVPSGISAGHADSGGG 139

Query: 184 TTTQ--ASEXXXXXXXXXXXXXXXXQLDALGSFG-VGFTPHVITVKAGEDIASKIMAFSQ 354
             T   ASE                QLDALG  G VGFTPHVITVKAGEDIASKIMAFSQ
Sbjct: 140 GVTHDAASEHPSKKNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIASKIMAFSQ 199

Query: 355 QGPRTVCILSANGAVCNVALRQSTMSGGIVSYEGRFEIISLSGSFLLSESNGNCSRIGGL 534
           QGPRTVCILSANGA+CNV LRQ  MSGG V+YEGRFEIISLSGSFLLSESNG+ SR GGL
Sbjct: 200 QGPRTVCILSANGAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRSGGL 259


>ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245362 [Vitis vinifera]
           gi|297742130|emb|CBI33917.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  225 bits (573), Expect = 4e-57
 Identities = 120/177 (67%), Positives = 134/177 (75%)
 Frame = +1

Query: 4   YTDGSSPSSGFRAGGFSIEPARKKRGRPRKYSPDGNIALGLSPSPVTPISTVGHGDSGGG 183
           Y DGSS  +G R  GF+IEPA+KKRGRPRKY+PDGNIALGL+P+P+   ST  HGD+ G 
Sbjct: 65  YGDGSS--TGLRPCGFNIEPAKKKRGRPRKYAPDGNIALGLAPTPIP--STAAHGDATG- 119

Query: 184 TTTQASEXXXXXXXXXXXXXXXXQLDALGSFGVGFTPHVITVKAGEDIASKIMAFSQQGP 363
             T +SE                QLDALG+ GVGFTPHVITV  GEDIASKIMAFSQQGP
Sbjct: 120 --TPSSEPPAKRNRGRPPGSGKKQLDALGAAGVGFTPHVITVNVGEDIASKIMAFSQQGP 177

Query: 364 RTVCILSANGAVCNVALRQSTMSGGIVSYEGRFEIISLSGSFLLSESNGNCSRIGGL 534
           RTVCILSANGA+CNV LRQ  MSGG +SYEGRF+IISLSGSFLLSE NG+  R GGL
Sbjct: 178 RTVCILSANGAICNVTLRQPAMSGGTISYEGRFDIISLSGSFLLSEDNGSRHRTGGL 234


>ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|222833839|gb|EEE72316.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  217 bits (553), Expect = 8e-55
 Identities = 118/168 (70%), Positives = 127/168 (75%), Gaps = 6/168 (3%)
 Frame = +1

Query: 49  FSIEPARKKRGRPRKYSPDGNIALGLSPSPVTPISTVGHGDSGGGTTTQ-----ASEXXX 213
           FSIEPA+KKRGRPRKY+PDGNIALGLSP+P+    + G  DS GG  +      ASE   
Sbjct: 3   FSIEPAKKKRGRPRKYTPDGNIALGLSPTPIHSGMSAGQADSSGGAGSGVMPDVASEHPS 62

Query: 214 XXXXXXXXXXXXXQLDALGSFG-VGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSAN 390
                        QLDALG  G VGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSAN
Sbjct: 63  KKHRGRPPGSGKKQLDALGGTGGVGFTPHVITVKAGEDIASKIMAFSQQGPRTVCILSAN 122

Query: 391 GAVCNVALRQSTMSGGIVSYEGRFEIISLSGSFLLSESNGNCSRIGGL 534
           GA+CNV LRQ  MSGG V+YEGRFEIISLSGSFLLSESNG+ SR GGL
Sbjct: 123 GAICNVTLRQPAMSGGSVTYEGRFEIISLSGSFLLSESNGSRSRTGGL 170


>ref|XP_002519830.1| DNA binding protein, putative [Ricinus communis]
           gi|223540876|gb|EEF42434.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 376

 Score =  216 bits (550), Expect = 2e-54
 Identities = 124/187 (66%), Positives = 137/187 (73%), Gaps = 12/187 (6%)
 Frame = +1

Query: 10  DGSSP--SSGFRAGGFSIEPARKKRGRPRKYSPDGNIALGLSPSPVTPISTV-------- 159
           DGSSP  SSG R   FS++PA+KKRGRPRKY+PDGNIALGLSP+P++  +T         
Sbjct: 76  DGSSPPSSSGMR---FSMDPAKKKRGRPRKYTPDGNIALGLSPTPISSSATSLPPHVADS 132

Query: 160 GHGDSGG-GTTTQASEXXXXXXXXXXXXXXXXQLDALGSFG-VGFTPHVITVKAGEDIAS 333
           G G   G GT   AS+                QLDALG  G VGFTPHVITVKAGEDIAS
Sbjct: 133 GSGVGVGIGTPAIASDPPSKRNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGEDIAS 192

Query: 334 KIMAFSQQGPRTVCILSANGAVCNVALRQSTMSGGIVSYEGRFEIISLSGSFLLSESNGN 513
           KIMAFSQQGPRTVCILSANGA+CNV LRQ  MSGG V+YEGR+EIISLSGSFLLSE+NGN
Sbjct: 193 KIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGTVTYEGRYEIISLSGSFLLSENNGN 252

Query: 514 CSRIGGL 534
            SR GGL
Sbjct: 253 RSRSGGL 259


>ref|XP_004148734.1| PREDICTED: uncharacterized protein LOC101204243 [Cucumis sativus]
           gi|449511145|ref|XP_004163876.1| PREDICTED:
           uncharacterized LOC101204243 [Cucumis sativus]
          Length = 362

 Score =  199 bits (507), Expect = 2e-49
 Identities = 111/175 (63%), Positives = 127/175 (72%)
 Frame = +1

Query: 10  DGSSPSSGFRAGGFSIEPARKKRGRPRKYSPDGNIALGLSPSPVTPISTVGHGDSGGGTT 189
           DGS   S  R GGF+I+  +KKRGRPRKYSPDGNIALGLSP+P+T  S+    DS G   
Sbjct: 83  DGSQ--SELRTGGFNIDSGKKKRGRPRKYSPDGNIALGLSPTPIT--SSAVPADSAG--- 135

Query: 190 TQASEXXXXXXXXXXXXXXXXQLDALGSFGVGFTPHVITVKAGEDIASKIMAFSQQGPRT 369
             + +                Q+DALG+ GVGFTPHVI VK GEDIASK+MAFSQQGPRT
Sbjct: 136 MHSPDPRPKKNRGRPPGTGKRQMDALGTGGVGFTPHVILVKPGEDIASKVMAFSQQGPRT 195

Query: 370 VCILSANGAVCNVALRQSTMSGGIVSYEGRFEIISLSGSFLLSESNGNCSRIGGL 534
           VCILSA+GAVCNV L Q  +S G VSYEGR+EIISLSGSFL+SE+NGN SR GGL
Sbjct: 196 VCILSAHGAVCNVTL-QPALSSGSVSYEGRYEIISLSGSFLISENNGNRSRSGGL 249


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